Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022049_P001 | Maize | mitochondrion | 91.26 | 91.26 |
| EER97491 | Sorghum | plastid | 90.61 | 90.91 |
| TraesCS2D01G188400.1 | Wheat | cytosol | 65.7 | 77.93 |
| TraesCS2B01G207000.1 | Wheat | cytosol | 65.21 | 77.35 |
| Os07t0599000-01 | Rice | mitochondrion | 75.73 | 75.12 |
| HORVU2Hr1G033970.2 | Barley | cytosol, mitochondrion | 63.27 | 73.77 |
| GSMUA_Achr1P13560_001 | Banana | mitochondrion | 63.11 | 63.62 |
| Bra012457.1-P | Field mustard | cytosol | 6.8 | 59.15 |
| CDY40249 | Canola | cytosol | 6.8 | 59.15 |
| VIT_01s0011g00580.t01 | Wine grape | mitochondrion | 55.83 | 56.01 |
| VIT_08s0032g01120.t01 | Wine grape | cytosol, mitochondrion | 9.87 | 55.96 |
| PGSC0003DMT400072788 | Potato | mitochondrion | 55.18 | 55.27 |
| Solyc05g012390.2.1 | Tomato | nucleus | 55.02 | 55.11 |
| VIT_07s0005g04980.t01 | Wine grape | cytosol | 16.83 | 54.45 |
| KRH75029 | Soybean | mitochondrion | 53.24 | 53.41 |
| KRH70880 | Soybean | mitochondrion | 53.07 | 53.33 |
| VIT_13s0019g01590.t01 | Wine grape | cytosol | 8.41 | 52.0 |
| VIT_10s0003g05560.t01 | Wine grape | cytosol, plastid, vacuole | 16.34 | 51.01 |
| AT1G26460.1 | Thale cress | mitochondrion | 51.29 | 50.32 |
| CDY72152 | Canola | cytosol | 4.05 | 47.17 |
| GSMUA_Achr2P06170_001 | Banana | plastid | 40.78 | 46.24 |
| VIT_18s0001g14600.t01 | Wine grape | mitochondrion, plastid | 13.27 | 44.32 |
| VIT_11s0016g04430.t01 | Wine grape | cytosol | 7.61 | 42.34 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A1D6F0G6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | ProteinID:ONM24995.1 | ProteinID:ONM24996.1 | ProteinID:ONM24999.1 | PFAM:PF01535 |
| PFAM:PF13041 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF813 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI0008455CD5 | EnsemblPlantsGene:Zm00001d006769 | EnsemblPlants:Zm00001d006769_P001 | EnsemblPlants:Zm00001d006769_T001 | SEG:seg |
Description
Pentatricopeptide repeat-containing protein mitochondrial
Coordinates
chr2:+:216348138..216356341
Molecular Weight (calculated)
68793.1 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.212
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVAAATSH LLRHHRNPHL LLLRAAISSS RALPQQPELS PDPTAGTPDL AGAAPLPPNP STGSPFYTQN WRNPAAANPP SSLLPTVVAG SPFGAQHFMA
101: AFYDAPDVTG LKETFAKYMA EQRWEDMKHL FDHWVRSLDA ATGKPNHPDV DLFNHYLRAN LMTRALPHEM LDLADHMLEF ELQPNAASYN LVLKSMVASQ
201: ETEGAEKLIE RMLQTGTFPD DESYNLVVGL LIRQNLVDSS LKYLDLMLKS GYTLSLTVFT DYIRACMRSG RLDTLTSIIE KCKTTDKNKV LCPEWTWCID
301: IADAAFEANN SKLALFALEY LARWIARGEN VKPPVQLSVN EGLVISALSA AGRTYNTDLL NAAWSLLRKS LRQKRAPTPE TYLAKIYAHS SIGQLQRAFG
401: TLREFENAYG NSEDIDLELF SPFTSLHPLV VACCKDGFST LDSVYGQLEN LIHADPPYKS LAALNCVVLG CANIWDINRA YETFVAIKEK FDLTPDIHSY
501: NALLCAFGKL KQTGEACNVF QHVLTLGVKP NATTYSLLVD AHLANKDPKA ALAIIDEMVD AGFTPSKDTL RKVRRRCSRE SDFDSDEKVQ SLAKQFNYRM
601: GGENRREMLY SIEYNPVY
101: AFYDAPDVTG LKETFAKYMA EQRWEDMKHL FDHWVRSLDA ATGKPNHPDV DLFNHYLRAN LMTRALPHEM LDLADHMLEF ELQPNAASYN LVLKSMVASQ
201: ETEGAEKLIE RMLQTGTFPD DESYNLVVGL LIRQNLVDSS LKYLDLMLKS GYTLSLTVFT DYIRACMRSG RLDTLTSIIE KCKTTDKNKV LCPEWTWCID
301: IADAAFEANN SKLALFALEY LARWIARGEN VKPPVQLSVN EGLVISALSA AGRTYNTDLL NAAWSLLRKS LRQKRAPTPE TYLAKIYAHS SIGQLQRAFG
401: TLREFENAYG NSEDIDLELF SPFTSLHPLV VACCKDGFST LDSVYGQLEN LIHADPPYKS LAALNCVVLG CANIWDINRA YETFVAIKEK FDLTPDIHSY
501: NALLCAFGKL KQTGEACNVF QHVLTLGVKP NATTYSLLVD AHLANKDPKA ALAIIDEMVD AGFTPSKDTL RKVRRRCSRE SDFDSDEKVQ SLAKQFNYRM
601: GGENRREMLY SIEYNPVY
001: MASHLFTRSR ISLLKTLKPN PFTSASPIRA ISGTPFLSQD PLLATESTDH DPSNHQSTST PLPPNPATGS PLYQENWRSP IPNTPSFNQS LVPLGFLNQA
101: PAPRIRALSE TLDMNSLLNM FADWTASQRW SDMKQLFEVW VRSLDKNGKP NKPDVNLYNH YLRANLMMGA SAGDMLDLVA PMEEFSVEPN TASYNLVLKA
201: MYQARETEAA MKLLERMLLL GKDSLPDDES YDLVIGMHFG VGKNDEAMKV MDTALKSGYM LSTSVFTECV RSCVAKGRTD TLVSIIERCK AVDRNKSLCP
301: SWILCNYIAE VAIQEDNSKL AFYAFEFMFK WITRGEMARP SVIFSVDEGL VVAGLASAAR TCSSSLVEGS WTILKQSLRG RKAANPASYI AKINAYASLG
401: NLQKAFTSLH ELESAYADSE KEVVEEMLSP FTSLYPLVVA CSKKGFETLD EVYFQLESLS QGDTPYKSVA ALNCIILGCA NTWDLDRAYQ TFEAISASFG
501: LTPNIDSYNA LLYAFGKVKK TFEATNVFEH LVSIGVKPDS RTYSLLVDAH LINRDPKSAL TVVDDMIKAG FEPSRETLKK LRRRCVREMD DENDDQVEAL
601: AKKFQIRMGS ENRRNMLFNI DYSRGRALNN
101: PAPRIRALSE TLDMNSLLNM FADWTASQRW SDMKQLFEVW VRSLDKNGKP NKPDVNLYNH YLRANLMMGA SAGDMLDLVA PMEEFSVEPN TASYNLVLKA
201: MYQARETEAA MKLLERMLLL GKDSLPDDES YDLVIGMHFG VGKNDEAMKV MDTALKSGYM LSTSVFTECV RSCVAKGRTD TLVSIIERCK AVDRNKSLCP
301: SWILCNYIAE VAIQEDNSKL AFYAFEFMFK WITRGEMARP SVIFSVDEGL VVAGLASAAR TCSSSLVEGS WTILKQSLRG RKAANPASYI AKINAYASLG
401: NLQKAFTSLH ELESAYADSE KEVVEEMLSP FTSLYPLVVA CSKKGFETLD EVYFQLESLS QGDTPYKSVA ALNCIILGCA NTWDLDRAYQ TFEAISASFG
501: LTPNIDSYNA LLYAFGKVKK TFEATNVFEH LVSIGVKPDS RTYSLLVDAH LINRDPKSAL TVVDDMIKAG FEPSRETLKK LRRRCVREMD DENDDQVEAL
601: AKKFQIRMGS ENRRNMLFNI DYSRGRALNN
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.