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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0005g04980.t01 Wine grape cytosol 43.12 24.61
VIT_10s0003g05560.t01 Wine grape cytosol, plastid, vacuole 44.04 24.24
VIT_01s0011g00580.t01 Wine grape mitochondrion 85.32 15.1
TraesCS2D01G188400.1 Wheat cytosol 53.21 11.13
TraesCS2B01G207000.1 Wheat cytosol 53.21 11.13
GSMUA_Achr2P06170_001 Banana plastid 55.05 11.01
GSMUA_Achr1P13560_001 Banana mitochondrion 60.55 10.77
HORVU2Hr1G033970.2 Barley cytosol, mitochondrion 52.29 10.75
Bra024715.1-P Field mustard mitochondrion 58.72 10.36
CDY16159 Canola mitochondrion 58.72 10.36
CDX85021 Canola mitochondrion 57.8 10.28
KRH70880 Soybean mitochondrion 56.88 10.08
Zm00001d022049_P001 Maize mitochondrion 56.88 10.03
Zm00001d006769_P001 Maize mitochondrion 55.96 9.87
KRH75029 Soybean mitochondrion 55.05 9.74
EER97491 Sorghum plastid 55.05 9.74
AT1G26460.1 Thale cress mitochondrion 53.21 9.21
PGSC0003DMT400072788 Potato mitochondrion 51.38 9.08
Solyc05g012390.2.1 Tomato nucleus 50.46 8.91
Os07t0599000-01 Rice mitochondrion 50.46 8.83
VIT_11s0016g04430.t01 Wine grape cytosol 2.75 2.7
VIT_13s0019g01590.t01 Wine grape cytosol 0.0 0.0
VIT_18s0001g14600.t01 Wine grape mitochondrion, plastid 0.0 0.0
Protein Annotations
ArrayExpress:VIT_08s0032g01120EMBL:FN596742EnsemblPlants:VIT_08s0032g01120.t01EnsemblPlantsGene:VIT_08s0032g01120ProteinID:CCB61568ProteinID:CCB61568.1
UniParc:UPI000210AAC4UniProt:F6I3K4MapMan:35.1:::
Description
No Description!
Coordinates
chr8:+:5597463..5598069
Molecular Weight (calculated)
12199.2 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.402
Length
109 amino acids
Sequence
(BLAST)
001: MARWIGRGEN ARGHVLLSVD EGLVVSALGT AGRTYSSTLL DASWAILRDH CRAFSTLHEF ETAYRNSPKE ADEDIFSPFT SLHPSVMASS KKGFETLDTS
101: FRLNYDREK
Best Arabidopsis Sequence Match ( AT1G26460.1 )
(BLAST)
001: MASHLFTRSR ISLLKTLKPN PFTSASPIRA ISGTPFLSQD PLLATESTDH DPSNHQSTST PLPPNPATGS PLYQENWRSP IPNTPSFNQS LVPLGFLNQA
101: PAPRIRALSE TLDMNSLLNM FADWTASQRW SDMKQLFEVW VRSLDKNGKP NKPDVNLYNH YLRANLMMGA SAGDMLDLVA PMEEFSVEPN TASYNLVLKA
201: MYQARETEAA MKLLERMLLL GKDSLPDDES YDLVIGMHFG VGKNDEAMKV MDTALKSGYM LSTSVFTECV RSCVAKGRTD TLVSIIERCK AVDRNKSLCP
301: SWILCNYIAE VAIQEDNSKL AFYAFEFMFK WITRGEMARP SVIFSVDEGL VVAGLASAAR TCSSSLVEGS WTILKQSLRG RKAANPASYI AKINAYASLG
401: NLQKAFTSLH ELESAYADSE KEVVEEMLSP FTSLYPLVVA CSKKGFETLD EVYFQLESLS QGDTPYKSVA ALNCIILGCA NTWDLDRAYQ TFEAISASFG
501: LTPNIDSYNA LLYAFGKVKK TFEATNVFEH LVSIGVKPDS RTYSLLVDAH LINRDPKSAL TVVDDMIKAG FEPSRETLKK LRRRCVREMD DENDDQVEAL
601: AKKFQIRMGS ENRRNMLFNI DYSRGRALNN
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g26460, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FZD1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.