Factsheet for Zm00001d016199_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29886	Sorghum	mitochondrion	90.2	87.09
KXG29885	Sorghum	plastid	70.05	78.44
TraesCS4A01G081300.1	Wheat	unclear	73.62	73.1
TraesCS4B01G222500.1	Wheat	plasma membrane	73.62	72.97
TraesCS4D01G223000.1	Wheat	plasma membrane	73.44	72.79
Os02t0235900-01	Rice	plasma membrane, vacuole	73.26	72.49
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	74.69	72.12
GSMUA_Achr2P15490_001	Banana	golgi, vacuole	39.57	52.98
GSMUA_Achr4P31040_001	Banana	vacuole	49.2	51.69
Zm00001d046322_P001	Maize	extracellular	46.52	49.15
Zm00001d037005_P001	Maize	vacuole	45.28	48.47
VIT_12s0028g01780.t01	Wine grape	plasma membrane, vacuole	44.38	46.46
Zm00001d046319_P001	Maize	vacuole	41.71	44.49
Zm00001d046318_P001	Maize	vacuole	42.07	44.44
PGSC0003DMT400080465	Potato	cytosol	32.09	44.34
VIT_10s0003g05390.t01	Wine grape	extracellular	42.25	44.3
VIT_12s0028g01790.t01	Wine grape	plastid	42.6	43.85
KRH58387	Soybean	plastid, vacuole	42.78	43.72
VIT_12s0028g01770.t01	Wine grape	plasma membrane, vacuole	44.21	43.51
KRH36839	Soybean	nucleus	42.07	43.46
CDY66956	Canola	peroxisome, plasma membrane, plastid	32.44	43.23
CDY70228	Canola	cytosol, golgi, peroxisome	23.71	43.18
PGSC0003DMT400080468	Potato	vacuole	40.64	43.18
Zm00001d037009_P001	Maize	plasma membrane	45.1	43.17
KRH11824	Soybean	nucleus	41.71	43.09
KRH58398	Soybean	plasma membrane, vacuole	40.64	42.94
Solyc02g070060.1.1	Tomato	vacuole	40.11	42.78
Solyc10g054480.1.1	Tomato	plastid	23.17	42.76
CDY59834	Canola	peroxisome, plasma membrane, plastid	34.22	42.76
Bra024719.1-P	Field mustard	peroxisome, plastid, vacuole	34.4	42.7
KRH56394	Soybean	vacuole	40.11	42.69
VIT_10s0003g05470.t01	Wine grape	vacuole	42.96	42.65
KRH42266	Soybean	vacuole	40.82	42.49
KRH36852	Soybean	plastid	33.51	42.44
VIT_10s0003g05550.t01	Wine grape	vacuole	40.11	42.37
Solyc06g065070.1.1	Tomato	vacuole	40.46	42.35
KRH42273	Soybean	nucleus	39.75	42.31
VIT_10s0003g05420.t01	Wine grape	vacuole	40.64	42.3
VIT_10s0003g05620.t01	Wine grape	vacuole	39.93	42.18
Bra016272.1-P	Field mustard	peroxisome, plasma membrane, plastid	25.31	42.14
KRH42267	Soybean	vacuole	39.57	42.13
KRH42808	Soybean	extracellular, vacuole	40.11	42.06
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	39.57	42.05
Solyc06g065060.1.1	Tomato	extracellular	40.29	42.01
Solyc02g070070.1.1	Tomato	extracellular	39.75	42.0
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	32.26	42.0
CDY43653	Canola	golgi	22.82	41.97
KRH42268	Soybean	vacuole	39.57	41.97
KRH58399	Soybean	nucleus	39.93	41.95
KRH42274	Soybean	mitochondrion, nucleus	39.04	41.87
Zm00001d049169_P001	Maize	vacuole	39.39	41.86
PGSC0003DMT400086243	Potato	vacuole	39.22	41.83
VIT_10s0003g05580.t01	Wine grape	plasma membrane, vacuole	39.57	41.81
CDX94788	Canola	vacuole	39.93	41.79
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	39.75	41.76
Bra027549.1-P	Field mustard	peroxisome	33.33	41.74
KRH58391	Soybean	vacuole	39.39	41.7
AT5G44410.1	Thale cress	golgi	39.75	41.68
KRH58388	Soybean	vacuole	40.64	41.68
KRH42269	Soybean	vacuole	39.39	41.62
PGSC0003DMT400080467	Potato	vacuole	39.75	41.45
KRH58389	Soybean	nucleus	39.57	41.42
Bra033740.1-P	Field mustard	golgi	40.29	41.32
PGSC0003DMT400054385	Potato	plastid	36.36	41.21
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	38.32	41.19
KRH58344	Soybean	vacuole	38.86	41.13
CDX79034	Canola	plastid	38.15	41.07
Bra027552.1-P	Field mustard	peroxisome	24.96	41.06
CDY72595	Canola	extracellular, vacuole	27.81	41.05
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	38.15	41.0
Zm00001d037008_P001	Maize	golgi, vacuole	37.25	40.9
CDX79010	Canola	cytosol	19.43	40.82
Solyc09g072660.2.1	Tomato	extracellular	39.93	40.8
CDY68515	Canola	extracellular, plasma membrane	27.63	40.79
AT4G20860.1	Thale cress	vacuole	38.5	40.75
Bra027555.1-P	Field mustard	extracellular, vacuole	38.68	40.71
CDY13104	Canola	extracellular, vacuole	38.68	40.71
CDY31432	Canola	vacuole	38.5	40.68
KRH56395	Soybean	nucleus	38.32	40.64
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	37.79	40.61
VIT_03s0017g01470.t01	Wine grape	vacuole	22.64	40.58
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	38.32	40.57
CDX94008	Canola	golgi	38.68	40.56
CDY29118	Canola	cytosol, peroxisome, plastid	28.16	40.51
AT5G44360.2	Thale cress	golgi	39.57	40.51
CDX77574	Canola	cytosol	28.88	40.5
Bra020915.1-P	Field mustard	vacuole	38.32	40.49
CDY29122	Canola	cytosol	13.9	40.41
CDX76449	Canola	vacuole	38.32	40.41
KRH41927	Soybean	nucleus	38.15	40.38
CDY29116	Canola	extracellular, vacuole	38.32	40.34
Zm00001d049539_P001	Maize	extracellular, vacuole	39.39	40.33
Zm00001d024541_P001	Maize	vacuole	40.11	40.32
PGSC0003DMT400054564	Potato	cytosol, plastid	35.47	40.28
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	38.32	40.26
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.32	40.26
CDX82800	Canola	extracellular	37.43	40.23
KRH11825	Soybean	vacuole	37.43	40.23
Bra013501.1-P	Field mustard	vacuole	38.15	40.23
PGSC0003DMT400054571	Potato	cytosol	29.06	40.15
PGSC0003DMT400043091	Potato	extracellular	37.79	40.08
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	39.57	40.07
Bra005392.1-P	Field mustard	plasma membrane	37.97	40.04
VIT_10s0003g05570.t01	Wine grape	plasma membrane, vacuole	39.75	40.04
Bra038799.1-P	Field mustard	golgi	38.15	40.0
AT2G34790.1	Thale cress	golgi, vacuole	37.79	39.85
CDX98675	Canola	golgi	37.97	39.81
AT1G26390.1	Thale cress	vacuole	37.61	39.81
Bra023122.1-P	Field mustard	vacuole	37.61	39.81
Solyc02g070130.1.1	Tomato	vacuole	37.79	39.77
CDY49007	Canola	vacuole	38.32	39.74
CDX98676	Canola	vacuole	38.15	39.7
CDY67309	Canola	endoplasmic reticulum, plasma membrane	37.79	39.7
AT5G44400.1	Thale cress	golgi, vacuole	37.97	39.66
PGSC0003DMT400054386	Potato	vacuole	37.61	39.66
CDY69093	Canola	vacuole	37.79	39.63
VIT_10s0003g04730.t01	Wine grape	plasma membrane, vacuole	37.79	39.63
AT4G20840.1	Thale cress	plasma membrane	37.97	39.52
CDX77568	Canola	endoplasmic reticulum, plasma membrane	37.61	39.51
CDX82776	Canola	endoplasmic reticulum, vacuole	37.61	39.51
CDX84280	Canola	plasma membrane	35.83	39.49
CDY31642	Canola	plasma membrane	35.83	39.49
AT4G20820.1	Thale cress	plastid	37.43	39.47
Bra013475.1-P	Field mustard	golgi, vacuole	37.61	39.44
CDX79007	Canola	golgi, vacuole	37.61	39.44
Solyc02g070110.1.1	Tomato	extracellular, vacuole	37.25	39.43
Bra014886.1-P	Field mustard	extracellular	36.9	39.35
CDY50728	Canola	extracellular, vacuole	36.9	39.35
PGSC0003DMT400046308	Potato	extracellular	38.15	39.34
Zm00001d049536_P001	Maize	vacuole	38.15	39.34
Bra038798.1-P	Field mustard	vacuole	37.79	39.33
CDX94009	Canola	vacuole	37.79	39.33
Bra014890.1-P	Field mustard	plasma membrane	37.43	39.33
KRH36853	Soybean	vacuole	37.61	39.29
CDY16155	Canola	endoplasmic reticulum, extracellular, vacuole	36.36	39.23
KRH36766	Soybean	vacuole	37.25	39.21
PGSC0003DMT400012979	Potato	cytosol	27.81	39.2
Bra013476.1-P	Field mustard	cytosol, plastid	37.61	39.15
Solyc02g070090.1.1	Tomato	extracellular	37.25	39.14
Solyc02g069690.1.1	Tomato	golgi, vacuole	38.15	39.12
CDY29117	Canola	vacuole	37.25	39.07
KRH11845	Soybean	vacuole	37.25	39.07
CDX94780	Canola	plasma membrane, vacuole	37.79	39.04
KRH11826	Soybean	nucleus	37.79	38.97
KRH42272	Soybean	vacuole	37.43	38.96
PGSC0003DMT400089776	Potato	golgi, vacuole	37.97	38.94
KRH11827	Soybean	vacuole	37.25	38.92
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	37.25	38.92
Solyc02g070170.1.1	Tomato	extracellular, vacuole	37.08	38.88
KRH36840	Soybean	nucleus	37.97	38.87
CDY49803	Canola	vacuole	36.72	38.87
KRH36842	Soybean	vacuole	36.9	38.84
CDX97984	Canola	plasma membrane, vacuole	36.72	38.79
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	35.47	38.79
AT1G30760.2	Thale cress	golgi	38.15	38.77
AT1G26400.1	Thale cress	golgi, vacuole	36.36	38.71
KRH11844	Soybean	vacuole	37.25	38.63
Bra019831.1-P	Field mustard	plasma membrane, vacuole	36.54	38.61
AT1G30730.1	Thale cress	extracellular	36.19	38.59
CDY68914	Canola	golgi, plastid	29.77	38.57
AT1G30720.1	Thale cress	vacuole	36.19	38.52
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	37.08	38.52
KRH36843	Soybean	vacuole	36.54	38.46
CDX85019	Canola	extracellular	35.47	38.42
Bra024717.1-P	Field mustard	vacuole	36.01	38.33
CDY16156	Canola	vacuole	36.01	38.33
AT1G26380.1	Thale cress	endoplasmic reticulum	36.54	38.32
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.78	38.29
PGSC0003DMT400057528	Potato	extracellular	36.72	38.29
Solyc02g022850.1.1	Tomato	vacuole	36.9	38.26
Bra006964.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.54	38.25
CDX79008	Canola	vacuole	38.68	38.2
CDY70679	Canola	cytosol, mitochondrion, peroxisome	15.86	38.2
AT1G26420.1	Thale cress	vacuole	36.01	38.19
Bra027547.1-P	Field mustard	vacuole	36.72	38.15
AT1G30700.1	Thale cress	vacuole	35.83	38.14
CDY09547	Canola	extracellular, vacuole	35.83	38.14
KRH42271	Soybean	endoplasmic reticulum	39.22	38.13
Solyc02g070200.1.1	Tomato	vacuole	36.72	38.08
Bra023126.1-P	Field mustard	extracellular, vacuole	35.83	38.07
CDY71012	Canola	extracellular, vacuole	35.83	38.07
Bra033743.1-P	Field mustard	vacuole	36.36	37.99
Solyc02g079440.1.1	Tomato	nucleus	36.36	37.92
AT1G01980.1	Thale cress	plasma membrane, vacuole	36.54	37.89
KRH11830	Soybean	vacuole	33.16	37.8
Bra028530.1-P	Field mustard	plasma membrane, vacuole	36.19	37.8
CDX67534	Canola	plasma membrane, vacuole	36.19	37.8
CDY49011	Canola	vacuole	36.19	37.8
CDY02321	Canola	extracellular, vacuole	36.01	37.69
CDX94785	Canola	vacuole	36.01	37.62
Solyc02g079450.1.1	Tomato	extracellular	36.01	37.62
VIT_03s0017g01490.t01	Wine grape	vacuole	36.54	37.61
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	35.65	37.59
AT1G34575.1	Thale cress	vacuole	35.29	37.57
KRH11841	Soybean	vacuole	37.43	37.57
CDX82782	Canola	vacuole	38.15	37.54
KRH41928	Soybean	vacuole	35.47	37.48
Bra021930.1-P	Field mustard	plasma membrane	33.51	37.45
CDY13105	Canola	vacuole	36.01	37.41
AT1G26410.1	Thale cress	golgi	36.72	37.32
CDX79582	Canola	mitochondrion	31.73	37.32
CDY09546	Canola	extracellular, vacuole	35.65	37.31
AT5G44390.1	Thale cress	vacuole	36.01	37.27
AT4G20800.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	34.94	37.12
Bra022992.1-P	Field mustard	mitochondrion	31.55	37.11
CDY70640	Canola	mitochondrion	31.55	37.11
Bra014885.1-P	Field mustard	plasma membrane, vacuole	35.12	37.1
KRH42276	Soybean	nucleus	39.22	37.1
Bra013473.1-P	Field mustard	vacuole	34.76	37.07
CDY13353	Canola	plasma membrane	35.47	37.06
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	36.54	37.0
Bra013472.1-P	Field mustard	extracellular, vacuole	34.76	37.0
KRH58395	Soybean	endoplasmic reticulum	38.32	36.94
AT1G11770.1	Thale cress	vacuole	35.29	36.94
CDX77576	Canola	plasma membrane, vacuole	34.94	36.91
CDY34627	Canola	vacuole	35.12	36.82
CDX79004	Canola	extracellular, vacuole	34.58	36.81
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	36.19	36.78
CDY50727	Canola	plasma membrane, vacuole	34.76	36.72
AT4G20830.1	Thale cress	vacuole	37.25	36.67
CDX82774	Canola	extracellular, vacuole	34.4	36.62
AT1G30740.2	Thale cress	vacuole	34.94	36.57
AT1G30710.1	Thale cress	extracellular, plasma membrane, vacuole	34.58	36.53
KRH36851	Soybean	vacuole	36.72	36.46
Bra031780.1-P	Field mustard	vacuole	34.94	36.43
CDY34829	Canola	vacuole	34.94	36.43
KRH49946	Soybean	extracellular, vacuole	27.45	36.32
CDX79005	Canola	vacuole	34.05	36.31
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	36.36	36.23
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	36.19	36.19
Bra023123.1-P	Field mustard	plasma membrane, vacuole	32.98	36.13
CDY02318	Canola	plasma membrane, vacuole	32.98	36.13
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	34.58	35.99
CDX82775	Canola	extracellular, vacuole	33.87	35.98
KRH36841	Soybean	vacuole	25.13	35.88
AT5G44440.2	Thale cress	golgi	38.5	35.82
VIT_10s0003g05450.t01	Wine grape	extracellular	36.54	35.71
Bra027553.1-P	Field mustard	vacuole	27.63	35.63
KRH12123	Soybean	plastid	29.06	35.59
AT5G44380.2	Thale cress	mitochondrion, plastid	36.36	35.11
CDY52527	Canola	vacuole	33.87	35.06
Zm00001d022215_P001	Maize	plastid	32.8	34.91
CDX94786	Canola	vacuole	32.98	34.84
Bra005390.1-P	Field mustard	vacuole	33.33	34.69
CDY69038	Canola	vacuole	33.33	34.69
AT2G34810.1	Thale cress	vacuole	33.16	34.44
CDX82780	Canola	cytosol	13.01	34.11
KRH71761	Soybean	mitochondrion, plastid, vacuole	25.49	33.65
Bra033739.1-P	Field mustard	plasma membrane, vacuole	36.19	33.39
KRG99206	Soybean	extracellular, peroxisome	22.46	31.19
CDX85018	Canola	cytosol	36.72	30.75

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	ProteinID:AQK70303.1	InterPro:BBE
EMBL:BT067883	UniProt:C0PHW4	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167
InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF31
SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000195CF6C	EnsemblPlantsGene:Zm00001d016199	EnsemblPlants:Zm00001d016199_P001	EnsemblPlants:Zm00001d016199_T001
SEG:seg	:	:	:	:	:

Description

FAD-binding Berberine family protein

Coordinates

chr5:-:150352205..150353890

Molecular Weight (calculated)

60898.8 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.140

Length

561 amino acids

Sequence
(BLAST)

001: MMSKTKAAVR PRSWHLPFLF LLLLAQTCSP QEQGGGGALH GSFVRCVARL SPATTDTSRL VHAPSAASYP SLLNATIQNL RFASPRTPRP ALLLTPATVA
101: EARACVTCCR RHGLTVRARS GGHDYEGLSY RSVAGARPFA VVDVAALRDV RVDAGRRVAR AGPGATLGEL YYAVTRESGG ALGFPAGICP TVCVGGHLSG
201: GGFGPMMRKH GLGADNVVDA EVVDAEGRLL DRAAMGEGLF WAIRGGGGGS FGVVVSWTVR LVPVPPVVSA FTVRRLVRRG DQRQTQAAVR LLTKWQRVAH
301: ALPEDLFVKV AMEPEVDDAG ERHPSVTFKS LFLGNCSGMV AEMSAHLPEL DVRAGDCREM SWIQSTLYFY GYTGEQAAEV LLDRSLQPKD YYKVKLDYLT
401: SPIPAAGLGG LLARVVEDRG GSVDVDPQGG AMSETPESDT PYAHRRGYLY NVQYFVKWGG DANVSYEDAH LAWVRGVHRF MTPYASARPR AAYVNFRDLD
501: LGQNLEGETS YEAARAWGEM YFRGNFRRLA MVKAEVDPDQ VFWSEQSIPP LLQTNGMLSD T

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.