Factsheet for Solyc10g054480.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g070060.1.1	Tomato	vacuole	93.75	54.18
PGSC0003DMT400086243	Potato	vacuole	89.8	51.9
VIT_10s0003g05390.t01	Wine grape	extracellular	58.55	33.27
KRH56394	Soybean	vacuole	54.28	31.31
TraesCS2B01G017300.1	Wheat	plastid	40.46	30.07
TraesCS2D01G052400.1	Wheat	vacuole	39.47	29.85
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	43.75	29.69
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	50.66	29.17
KRH56395	Soybean	nucleus	50.66	29.11
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	41.78	29.0
Solyc06g065070.1.1	Tomato	vacuole	50.99	28.92
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	39.47	28.92
Solyc06g065060.1.1	Tomato	extracellular	50.66	28.62
Solyc02g070110.1.1	Tomato	extracellular, vacuole	48.36	27.74
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	48.68	27.41
Solyc09g072660.2.1	Tomato	extracellular	49.34	27.32
Solyc02g070130.1.1	Tomato	vacuole	47.7	27.2
Solyc02g070090.1.1	Tomato	extracellular	47.7	27.15
EER89910	Sorghum	vacuole	46.71	26.84
Solyc02g070070.1.1	Tomato	extracellular	46.71	26.74
Zm00001d046318_P001	Maize	vacuole	46.71	26.74
TraesCS5D01G268800.1	Wheat	vacuole	46.05	26.67
Solyc02g070200.1.1	Tomato	vacuole	47.37	26.62
Solyc02g079440.1.1	Tomato	nucleus	47.04	26.58
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	46.05	26.46
Solyc02g070170.1.1	Tomato	extracellular, vacuole	46.38	26.36
TraesCS7B01G273700.1	Wheat	vacuole	45.07	26.35
Solyc02g069690.1.1	Tomato	golgi, vacuole	47.37	26.33
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	46.05	26.32
TraesCS5A01G261400.1	Wheat	vacuole	45.39	26.29
Zm00001d037008_P001	Maize	golgi, vacuole	44.08	26.22
TraesCS7A01G353900.1	Wheat	vacuole	44.74	26.2
TraesCS7D01G368800.1	Wheat	vacuole	44.74	26.15
Zm00001d037005_P001	Maize	vacuole	45.07	26.14
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	46.05	25.97
KXG20146	Sorghum	extracellular	45.39	25.89
TraesCS2D01G006000.1	Wheat	plastid	43.09	25.89
Os06t0549600-01	Rice	extracellular	44.74	25.86
TraesCS7B01G273600.1	Wheat	vacuole	43.75	25.73
TraesCS7D01G368700.1	Wheat	unclear	43.75	25.73
Solyc02g079450.1.1	Tomato	extracellular	45.39	25.7
Solyc02g022850.1.1	Tomato	vacuole	45.72	25.69
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	43.75	25.68
EER89909	Sorghum	extracellular, plasma membrane, vacuole	44.41	25.67
TraesCS7A01G354000.1	Wheat	vacuole	43.42	25.53
TraesCS7A01G354100.1	Wheat	vacuole	36.51	25.52
HORVU7Hr1G089260.1	Barley	mitochondrion	40.79	25.51
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	45.07	25.46
Os06t0549300-00	Rice	extracellular	43.75	25.43
TraesCS2A01G542600.1	Wheat	vacuole	44.41	25.42
Zm00001d046322_P001	Maize	extracellular	44.41	25.42
TraesCS4B01G391900.1	Wheat	vacuole	42.76	25.39
TraesCS7A01G126600.1	Wheat	vacuole	43.42	25.38
Zm00001d046319_P001	Maize	vacuole	43.75	25.29
HORVU2Hr1G013930.1	Barley	golgi, vacuole	45.39	25.27
TraesCS7A01G400100.1	Wheat	unclear	43.42	25.14
TraesCS1B01G456900.1	Wheat	vacuole	41.12	25.1
TraesCS7D01G393900.1	Wheat	vacuole	43.09	25.05
HORVU2Hr1G122590.1	Barley	vacuole	44.08	25.05
Os06t0548100-00	Rice	golgi	44.08	25.05
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	42.76	25.0
HORVU7Hr1G089160.3	Barley	vacuole	43.09	24.95
EER89908	Sorghum	plasma membrane, vacuole	44.08	24.86
TraesCS4B01G358600.1	Wheat	golgi	42.76	24.86
TraesCSU01G034600.1	Wheat	vacuole	42.11	24.85
KXG20147	Sorghum	vacuole	43.75	24.81
Os06t0549900-01	Rice	extracellular	43.09	24.81
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	42.11	24.76
TraesCS2B01G572400.1	Wheat	unclear	43.09	24.72
TraesCS2B01G172300.1	Wheat	vacuole	42.76	24.57
TraesCS2B01G016900.1	Wheat	vacuole	41.78	24.52
HORVU2Hr1G000540.1	Barley	golgi, vacuole	43.75	24.49
TraesCS7B01G273500.1	Wheat	plastid	43.75	24.49
TraesCS2B01G066900.1	Wheat	nucleus, unclear	42.43	24.48
TraesCS2B01G066800.1	Wheat	vacuole	42.43	24.43
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.43	24.43
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	41.45	24.42
TraesCS2A01G052800.1	Wheat	plastid, vacuole	42.11	24.38
TraesCS5D01G309100.1	Wheat	vacuole	41.78	24.38
HORVU7Hr1G093940.1	Barley	vacuole	42.43	24.34
KXG26140	Sorghum	plasma membrane	42.76	24.3
TraesCS2A01G052600.1	Wheat	vacuole	42.43	24.25
TraesCS5B01G302700.1	Wheat	vacuole	41.45	24.23
TraesCS4B01G222500.1	Wheat	plasma membrane	45.07	24.2
TraesCS4D01G223000.1	Wheat	plasma membrane	45.07	24.2
TraesCS4A01G081300.1	Wheat	unclear	44.74	24.07
HORVU7Hr1G089270.1	Barley	vacuole	42.11	24.06
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	42.11	24.06
TraesCS2D01G151500.1	Wheat	vacuole	41.78	24.01
TraesCS1B01G469800.1	Wheat	vacuole	42.43	23.98
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	41.78	23.96
HORVU2Hr1G008300.1	Barley	plastid	41.45	23.95
HORVU4Hr1G017270.1	Barley	vacuole	42.76	23.94
TraesCS2D01G052300.1	Wheat	plastid	41.45	23.91
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	44.08	23.89
TraesCS1D01G338700.1	Wheat	plasma membrane	42.11	23.88
TraesCS2D01G052700.1	Wheat	unclear	41.45	23.86
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	41.45	23.86
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.11	23.84
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.45	23.77
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	40.79	23.71
KXG28418	Sorghum	vacuole	41.12	23.67
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	45.07	23.58
Os06t0548800-01	Rice	extracellular	41.12	23.54
TraesCS2D01G543700.1	Wheat	unclear	43.42	23.53
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	40.79	23.53
TraesCS4B01G104000.1	Wheat	vacuole	42.11	23.53
TraesCS1D01G433600.1	Wheat	vacuole	41.78	23.52
TraesCS2A01G052900.1	Wheat	unclear	40.79	23.48
KXG20949	Sorghum	vacuole	41.78	23.48
TraesCS4D01G101000.1	Wheat	golgi	41.78	23.39
EER89907	Sorghum	plasma membrane, vacuole	40.46	23.38
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	40.13	23.37
TraesCS3A01G111600.1	Wheat	vacuole	40.79	23.35
TraesCS2B01G066400.1	Wheat	plastid	40.46	23.3
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.8	23.27
TraesCS2A01G005700.1	Wheat	vacuole	37.83	23.23
TraesCS7B01G273800.1	Wheat	plasma membrane	39.8	23.22
HORVU2Hr1G008310.1	Barley	golgi, vacuole	41.45	23.2
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.8	23.18
TraesCS7D01G472000.1	Wheat	vacuole	39.8	23.18
Zm00001d016199_P001	Maize	mitochondrion	42.76	23.17
HORVU1Hr1G092680.1	Barley	golgi, vacuole	40.79	23.13
Zm00001d049169_P001	Maize	vacuole	40.13	23.11
TraesCS7A01G353800.1	Wheat	vacuole	39.47	23.08
TraesCS7B01G273900.1	Wheat	vacuole	39.47	23.08
TraesCS4A01G212100.1	Wheat	vacuole	41.12	23.06
HORVU7Hr1G089190.1	Barley	vacuole	39.8	23.05
Os11t0495950-00	Rice	plasma membrane, vacuole	40.79	22.96
Os02t0235900-01	Rice	plasma membrane, vacuole	42.76	22.93
Os06t0549633-00	Rice	vacuole	39.8	22.92
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	38.16	22.57
KXG29886	Sorghum	mitochondrion	43.09	22.55
EES13185	Sorghum	vacuole	40.46	22.53
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.45	22.3
Os06t0548200-01	Rice	extracellular	39.14	22.28
TraesCS2B01G145300.1	Wheat	plasma membrane	41.78	22.2
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	41.45	21.99
TraesCS1A01G424100.1	Wheat	vacuole	36.84	21.96
Zm00001d037009_P001	Maize	plasma membrane	41.45	21.5
Solyc04g080400.1.1	Tomato	extracellular	39.8	21.45
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.79	21.42
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.13	21.22
KXG29885	Sorghum	plastid	34.87	21.16
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.13	21.07
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.13	21.0
TraesCS2B01G145500.1	Wheat	vacuole	40.13	20.96
HORVU2Hr1G008270.1	Barley	peroxisome	21.38	20.9
TraesCS2A01G051500.1	Wheat	peroxisome	22.7	20.23
HORVU7Hr1G089210.1	Barley	mitochondrion	40.79	20.2
TraesCS7B01G026000.1	Wheat	cytosol	20.39	18.67
HORVU7Hr1G026630.1	Barley	plastid	29.28	17.55
TraesCS1D01G443200.1	Wheat	cytosol	17.76	17.09
TraesCS3B01G070000.1	Wheat	mitochondrion	9.54	10.28
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	4.61	5.86
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	2.3	3.2

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf
InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
InterPro:IPR016166	InterPro:IPR016167	UniProt:K4D146	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	EnsemblPlantsGene:Solyc10g054480.1
EnsemblPlants:Solyc10g054480.1.1	UniParc:UPI000276AA06	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:55514870..55515784

Molecular Weight (calculated)

33221.2 Da

IEP (calculated)

8.315

GRAVY (calculated)

0.024

Length

304 amino acids

Sequence
(BLAST)

001: MSFHTTSTSS SVVHSQQSSS YTYLLQESQQ NPRWLNSTSL LKPSFIVTPK TQNEIQGAIL CAKKDGLQIR VMSGGHDYEG LSLLCKKPFI ILDLVDYRST
101: NIDIENETAW IHSGATIGEV YYNIAKKSNI LGFPAGLCPS VGVGGHLSGG GIGTMMRKYG MAADNIIDAN LVDANGTILN RKTTGEDVFW AIRGGGGASF
201: VVISAWKVRL VRVPSLVTVF TIHKRLDQEG VELVHNWRYI ASKLPEGLFI RVLIQQIDGI GKQGNVKLPE VLFNSLFLGL KSDLISLMNA NFPELGLKME
301: DCTG

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.