Factsheet for Solyc02g070090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 22364583
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	78.28	96.98
VIT_10s0003g05550.t01	Wine grape	vacuole	66.1	66.48
VIT_10s0003g05620.t01	Wine grape	vacuole	66.1	66.48
VIT_10s0003g05580.t01	Wine grape	plasma membrane, vacuole	65.36	65.72
KRH11845	Soybean	vacuole	63.11	62.99
KRH36852	Soybean	plastid	51.87	62.53
KRH36853	Soybean	vacuole	62.36	62.01
KRH11844	Soybean	vacuole	62.73	61.92
VIT_10s0003g05570.t01	Wine grape	plasma membrane, vacuole	64.04	61.4
Bra023122.1-P	Field mustard	vacuole	57.3	57.74
AT1G30700.1	Thale cress	vacuole	56.55	57.31
CDY72595	Canola	extracellular, vacuole	40.26	56.58
KRH11841	Soybean	vacuole	58.43	55.81
CDY68515	Canola	extracellular, plasma membrane	39.7	55.79
KRH36851	Soybean	vacuole	58.99	55.75
KRH71761	Soybean	mitochondrion, plastid, vacuole	44.01	55.29
Solyc02g022850.1.1	Tomato	vacuole	55.24	54.53
Solyc06g065070.1.1	Tomato	vacuole	53.18	52.99
Solyc06g065060.1.1	Tomato	extracellular	53.18	52.79
KRH12123	Soybean	plastid	44.19	51.53
Solyc02g070130.1.1	Tomato	vacuole	48.69	48.78
Solyc02g070110.1.1	Tomato	extracellular, vacuole	47.75	48.11
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	48.5	47.96
Solyc10g054480.1.1	Tomato	plastid	27.15	47.7
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	39.89	47.54
Solyc02g070200.1.1	Tomato	vacuole	47.94	47.32
Solyc09g072660.2.1	Tomato	extracellular	48.5	47.18
Solyc02g070070.1.1	Tomato	extracellular	46.63	46.89
Solyc02g070170.1.1	Tomato	extracellular, vacuole	46.82	46.73
Solyc02g070060.1.1	Tomato	vacuole	44.38	45.06
Solyc02g069690.1.1	Tomato	golgi, vacuole	46.07	44.97
TraesCS7A01G354100.1	Wheat	vacuole	35.96	44.14
TraesCS1D01G443200.1	Wheat	cytosol	26.03	43.99
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.63	43.8
TraesCS7B01G273600.1	Wheat	vacuole	42.13	43.52
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	43.07	43.48
HORVU7Hr1G089270.1	Barley	vacuole	43.26	43.42
TraesCS7A01G354000.1	Wheat	vacuole	41.76	43.13
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	33.52	43.13
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	41.76	43.05
Os06t0548100-00	Rice	golgi	43.07	42.99
KXG20146	Sorghum	extracellular	42.88	42.96
Zm00001d046322_P001	Maize	extracellular	42.7	42.94
TraesCS7A01G353900.1	Wheat	vacuole	41.57	42.77
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.76	42.64
Os06t0549633-00	Rice	vacuole	42.13	42.61
TraesCS1B01G469800.1	Wheat	vacuole	42.88	42.57
TraesCS7D01G368700.1	Wheat	unclear	41.2	42.55
TraesCS2B01G172300.1	Wheat	vacuole	42.13	42.53
TraesCS7B01G273700.1	Wheat	vacuole	41.2	42.31
TraesCS7D01G368800.1	Wheat	vacuole	41.2	42.31
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.51	42.27
TraesCS5D01G309100.1	Wheat	vacuole	41.2	42.23
TraesCS2D01G151500.1	Wheat	vacuole	41.76	42.16
Os06t0549900-01	Rice	extracellular	41.57	42.05
KXG20147	Sorghum	vacuole	42.13	41.98
TraesCS1D01G338700.1	Wheat	plasma membrane	42.13	41.98
Solyc02g079450.1.1	Tomato	extracellular	42.13	41.9
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.13	41.82
TraesCS2B01G017300.1	Wheat	plastid	32.02	41.81
TraesCS1B01G456900.1	Wheat	vacuole	38.95	41.77
Os06t0548200-01	Rice	extracellular	41.76	41.76
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	41.57	41.73
HORVU7Hr1G089160.3	Barley	vacuole	41.01	41.71
TraesCS2A01G052900.1	Wheat	unclear	41.2	41.67
TraesCS2A01G051500.1	Wheat	peroxisome	26.59	41.64
EER89907	Sorghum	plasma membrane, vacuole	41.01	41.63
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.76	41.6
TraesCS5B01G302700.1	Wheat	vacuole	40.45	41.54
TraesCS2A01G052800.1	Wheat	plastid, vacuole	40.82	41.52
TraesCS1D01G433600.1	Wheat	vacuole	41.95	41.48
TraesCS2B01G066800.1	Wheat	vacuole	41.01	41.48
EER89909	Sorghum	extracellular, plasma membrane, vacuole	40.82	41.44
Zm00001d037005_P001	Maize	vacuole	40.64	41.41
TraesCS1A01G424100.1	Wheat	vacuole	39.51	41.37
TraesCS2D01G052300.1	Wheat	plastid	40.82	41.37
Os06t0549300-00	Rice	extracellular	40.45	41.3
Os06t0549600-01	Rice	extracellular	40.64	41.25
Zm00001d046318_P001	Maize	vacuole	41.01	41.24
TraesCS2B01G066900.1	Wheat	nucleus, unclear	40.64	41.18
HORVU2Hr1G008270.1	Barley	peroxisome	23.97	41.16
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.07	41.15
TraesCS2B01G066400.1	Wheat	plastid	40.64	41.1
Solyc02g079440.1.1	Tomato	nucleus	41.39	41.08
Zm00001d046319_P001	Maize	vacuole	40.45	41.06
EER89908	Sorghum	plasma membrane, vacuole	41.39	41.0
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.89	40.96
TraesCS5D01G268800.1	Wheat	vacuole	40.26	40.95
EER89910	Sorghum	vacuole	40.45	40.83
TraesCS4B01G391900.1	Wheat	vacuole	39.14	40.82
TraesCS2A01G052600.1	Wheat	vacuole	40.64	40.79
HORVU7Hr1G089190.1	Barley	vacuole	40.07	40.76
TraesCS5A01G261400.1	Wheat	vacuole	40.07	40.76
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.26	40.72
Zm00001d037008_P001	Maize	golgi, vacuole	38.95	40.7
TraesCS7A01G353800.1	Wheat	vacuole	39.51	40.58
TraesCS2D01G052700.1	Wheat	unclear	40.07	40.53
TraesCS7B01G273500.1	Wheat	plastid	41.2	40.52
Os06t0548800-01	Rice	extracellular	40.26	40.49
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.51	40.42
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.51	40.42
TraesCS7B01G273900.1	Wheat	vacuole	39.33	40.38
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	40.07	40.38
HORVU2Hr1G122590.1	Barley	vacuole	40.45	40.37
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.7	40.35
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	38.95	40.31
HORVU2Hr1G008300.1	Barley	plastid	39.7	40.3
EES13185	Sorghum	vacuole	41.2	40.29
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	16.48	40.18
TraesCS2D01G006000.1	Wheat	plastid	38.02	40.12
TraesCS7B01G026000.1	Wheat	cytosol	24.91	40.06
TraesCS7D01G472000.1	Wheat	vacuole	39.14	40.04
TraesCS2B01G572400.1	Wheat	unclear	39.7	40.0
TraesCS7A01G126600.1	Wheat	vacuole	38.95	40.0
TraesCSU01G034600.1	Wheat	vacuole	38.58	40.0
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.64	39.96
KXG20949	Sorghum	vacuole	40.45	39.93
TraesCS7B01G273800.1	Wheat	plasma membrane	38.95	39.92
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.58	39.85
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.33	39.62
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	39.89	39.52
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.95	39.39
TraesCS4B01G358600.1	Wheat	golgi	38.58	39.39
TraesCS2B01G016900.1	Wheat	vacuole	38.2	39.38
TraesCS3B01G070000.1	Wheat	mitochondrion	20.79	39.36
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.76	39.28
KXG26140	Sorghum	plasma membrane	39.33	39.25
KXG28418	Sorghum	vacuole	38.76	39.2
Zm00001d049169_P001	Maize	vacuole	38.76	39.2
TraesCS7D01G393900.1	Wheat	vacuole	38.39	39.2
TraesCS2A01G542600.1	Wheat	vacuole	38.95	39.17
TraesCS7A01G400100.1	Wheat	unclear	38.39	39.05
HORVU4Hr1G017270.1	Barley	vacuole	39.7	39.04
TraesCS4D01G101000.1	Wheat	golgi	39.7	39.04
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	41.95	38.96
Os02t0235900-01	Rice	plasma membrane, vacuole	41.2	38.8
TraesCS3A01G111600.1	Wheat	vacuole	38.58	38.79
TraesCS4A01G212100.1	Wheat	vacuole	39.33	38.75
HORVU2Hr1G000540.1	Barley	golgi, vacuole	39.33	38.67
TraesCS4B01G104000.1	Wheat	vacuole	39.33	38.6
TraesCS2D01G052400.1	Wheat	vacuole	29.03	38.56
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	37.08	38.52
TraesCS2A01G005700.1	Wheat	vacuole	35.58	38.38
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	40.82	38.05
TraesCS4B01G222500.1	Wheat	plasma membrane	40.26	37.99
TraesCS2D01G543700.1	Wheat	unclear	39.89	37.97
TraesCS2B01G145300.1	Wheat	plasma membrane	40.64	37.94
HORVU7Hr1G093940.1	Barley	vacuole	37.64	37.92
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.09	37.9
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.01	37.82
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	16.85	37.66
HORVU2Hr1G013930.1	Barley	golgi, vacuole	38.39	37.55
TraesCS4A01G081300.1	Wheat	unclear	39.7	37.52
TraesCS4D01G223000.1	Wheat	plasma membrane	39.7	37.46
Zm00001d016199_P001	Maize	mitochondrion	39.14	37.25
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.45	37.18
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	38.95	37.08
Os11t0495950-00	Rice	plasma membrane, vacuole	36.89	36.48
Zm00001d037009_P001	Maize	plasma membrane	39.51	36.01
TraesCS2D01G126400.1	Wheat	golgi, vacuole	38.76	35.75
Solyc04g080400.1.1	Tomato	extracellular	37.64	35.64
KXG29886	Sorghum	mitochondrion	38.76	35.63
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	38.76	35.63
TraesCS2B01G145500.1	Wheat	vacuole	38.58	35.4
HORVU7Hr1G089210.1	Barley	mitochondrion	40.45	35.18
KXG29885	Sorghum	plastid	32.4	34.53
HORVU7Hr1G089260.1	Barley	mitochondrion	28.84	31.69
HORVU7Hr1G026630.1	Barley	plastid	29.21	30.77

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:K4B7Z1	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF25	SUPFAM:SSF56176	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc02g070090.1	EnsemblPlants:Solyc02g070090.1.1	UniParc:UPI000276848E	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:39928195..39929799

Molecular Weight (calculated)

60983.4 Da

IEP (calculated)

9.529

GRAVY (calculated)

-0.210

Length

534 amino acids

Sequence
(BLAST)

001: MMKIPLFPSC LIIFLVFATS ISPSHEHQLS FLECLEANSN PTYPISSLVF SPNNSSFPSI LQAYIRNLRF NESTTRKPLF ILTAQHESHI QASIVCAKSQ
101: GVQMKIRSGG HDYEGLSYVS NVPFFIVDMF NFRSINVSID DESAWVEVGA TLGEVYYRIA EKSNIYGFPA GVCPTVGVGG HFSGAGYGNM MRKYGLTVDN
201: IDDAKLIDVN GRILDRKSMG EDLFWAITGG GGVSYGVVLS YKIKLVRVPP KVTVFRVPRF YDQNALDLAY LWQRRANTWD NDLFMRMIID VVNRTTRTSE
301: KTIRVSFFTL YLGDSNRLLS LLNQSFPELG LERKDCIEMS WIESVLYYTN SPITPIDALL SRSPPLTYLK RKSDYLQKPM SKEGLEFIFK KMIELQTPTS
401: LVFNPYGGRM SEISPLAKPF PHRDGNIAKI QYSTNWNEKG VEASNHYLNL TRVLYNYMTP FVSKSPRLAF LNYRDIDLGT THNGKLSYFE GKVYGIKYFK
501: KENFNRLVKI KTKVDPQNFF RNEQSIPVYP SWRN

Best Arabidopsis Sequence Match ( AT1G30700.1 )
(BLAST)

001: MKYALILVLF FVVFIWQSSS SSANSETFTQ CLTSNSDPKH PISPAIFFSG NGSYSSVLQA NIRNLRFNTT STPKPFLIIA ATHESHVQAA ITCGKRHNLQ
101: MKIRSGGHDY DGLSYVTYSG KPFFVLDMFN LRSVDVDVAS KTAWVQTGAI LGEVYYYIWE KSKTLAYPAG ICPTVGVGGH ISGGGYGNMM RKYGLTVDNT
201: IDARMVDVNG KILDRKLMGE DLYWAINGGG GGSYGVVLAY KINLVEVPEN VTVFRISRTL EQNATDIIHR WQQVAPKLPD ELFIRTVIDV VNGTVSSQKT
301: VRTTFIAMFL GDTTTLLSIL NRRFPELGLV RSDCTETSWI QSVLFWTNIQ VGSSETLLLQ RNQPVNYLKR KSDYVREPIS RTGLESIWKK MIELEIPTMA
401: FNPYGGEMGR ISSTVTPFPY RAGNLWKIQY GANWRDETLT DRYMELTRKL YQFMTPFVSK NPRQSFFNYR DVDLGINSHN GKISSYVEGK RYGKKYFAGN
501: FERLVKIKTR VDSGNFFRNE QSIPVLP

Arabidopsis Description

Berberine bridge enzyme-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA85]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.