Factsheet for Solyc06g065060.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080467	Potato	vacuole	96.65	96.65
PGSC0003DMT400080465	Potato	cytosol	69.52	92.12
Solyc06g065070.1.1	Tomato	vacuole	88.1	88.43
KRH58388	Soybean	vacuole	62.08	61.06
KRH42266	Soybean	vacuole	61.15	61.04
KRH58387	Soybean	plastid, vacuole	60.97	59.74
KRH58389	Soybean	nucleus	58.92	59.14
Solyc02g070110.1.1	Tomato	extracellular, vacuole	56.88	57.74
KRH58344	Soybean	vacuole	56.32	57.17
Solyc02g070130.1.1	Tomato	vacuole	55.58	56.1
Solyc02g070200.1.1	Tomato	vacuole	55.2	54.9
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	54.65	54.44
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	44.8	53.79
Solyc02g070090.1.1	Tomato	extracellular	52.79	53.18
Solyc02g070170.1.1	Tomato	extracellular, vacuole	52.79	53.08
Solyc02g070070.1.1	Tomato	extracellular	51.3	51.98
Solyc09g072660.2.1	Tomato	extracellular	52.97	51.91
TraesCS1D01G443200.1	Wheat	cytosol	30.11	51.27
HORVU7Hr1G089270.1	Barley	vacuole	50.56	51.13
Solyc02g070060.1.1	Tomato	vacuole	49.81	50.95
Solyc02g069690.1.1	Tomato	golgi, vacuole	51.67	50.82
Solyc10g054480.1.1	Tomato	plastid	28.62	50.66
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	50.0	50.56
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	20.45	50.23
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	38.66	50.12
TraesCS7A01G354100.1	Wheat	vacuole	39.78	49.2
Os06t0548100-00	Rice	golgi	48.51	48.78
Solyc02g022850.1.1	Tomato	vacuole	48.88	48.61
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	47.77	48.58
KXG20147	Sorghum	vacuole	48.14	48.32
TraesCS1D01G338700.1	Wheat	plasma membrane	47.77	47.95
TraesCS7B01G026000.1	Wheat	cytosol	29.55	47.89
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	46.1	47.88
KXG20146	Sorghum	extracellular	47.4	47.84
TraesCS7A01G354000.1	Wheat	vacuole	45.91	47.78
EER89910	Sorghum	vacuole	46.84	47.64
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.4	47.49
TraesCS2B01G172300.1	Wheat	vacuole	46.65	47.45
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	49.81	47.43
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	47.4	47.4
TraesCS7D01G368700.1	Wheat	unclear	45.54	47.39
TraesCS1B01G469800.1	Wheat	vacuole	47.21	47.21
Os06t0548200-01	Rice	extracellular	46.65	47.0
Zm00001d037005_P001	Maize	vacuole	45.72	46.95
Solyc02g079450.1.1	Tomato	extracellular	46.84	46.93
TraesCS7B01G273700.1	Wheat	vacuole	45.35	46.92
TraesCS7D01G368800.1	Wheat	vacuole	45.35	46.92
TraesCS7B01G273600.1	Wheat	vacuole	44.98	46.81
Zm00001d046322_P001	Maize	extracellular	46.1	46.7
TraesCS2D01G151500.1	Wheat	vacuole	45.91	46.69
TraesCS5D01G268800.1	Wheat	vacuole	45.54	46.67
TraesCS7A01G353900.1	Wheat	vacuole	44.98	46.63
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	44.98	46.54
TraesCS1D01G433600.1	Wheat	vacuole	46.65	46.48
HORVU7Hr1G089160.3	Barley	vacuole	45.35	46.48
TraesCS1B01G456900.1	Wheat	vacuole	42.94	46.39
Solyc02g079440.1.1	Tomato	nucleus	46.28	46.28
HORVU1Hr1G092680.1	Barley	golgi, vacuole	46.1	46.27
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	45.72	46.24
TraesCS5A01G261400.1	Wheat	vacuole	44.98	46.1
Os06t0549900-01	Rice	extracellular	45.17	46.02
Os06t0549600-01	Rice	extracellular	44.98	46.01
Zm00001d046318_P001	Maize	vacuole	45.35	45.95
TraesCS1A01G424100.1	Wheat	vacuole	43.49	45.88
TraesCS2B01G572400.1	Wheat	unclear	44.98	45.66
TraesCS7A01G126600.1	Wheat	vacuole	44.05	45.58
TraesCS2B01G017300.1	Wheat	plastid	34.57	45.48
KXG20949	Sorghum	vacuole	45.72	45.47
EER89909	Sorghum	extracellular, plasma membrane, vacuole	44.42	45.44
TraesCS2A01G542600.1	Wheat	vacuole	44.8	45.39
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	45.17	45.08
HORVU2Hr1G008270.1	Barley	peroxisome	26.02	45.02
TraesCS2A01G052800.1	Wheat	plastid, vacuole	43.87	44.95
Os06t0549300-00	Rice	extracellular	43.68	44.93
TraesCS5D01G309100.1	Wheat	vacuole	43.49	44.91
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	44.24	44.91
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.05	44.89
HORVU2Hr1G122590.1	Barley	vacuole	44.61	44.86
TraesCS2B01G066900.1	Wheat	nucleus, unclear	43.87	44.78
TraesCS7B01G273500.1	Wheat	plastid	45.17	44.75
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	43.49	44.74
TraesCS2A01G052600.1	Wheat	vacuole	44.24	44.74
TraesCS4B01G391900.1	Wheat	vacuole	42.57	44.73
TraesCS2A01G051500.1	Wheat	peroxisome	28.25	44.57
TraesCS7D01G393900.1	Wheat	vacuole	43.31	44.55
TraesCSU01G034600.1	Wheat	vacuole	42.57	44.47
TraesCS2D01G052300.1	Wheat	plastid	43.49	44.4
HORVU2Hr1G000540.1	Barley	golgi, vacuole	44.8	44.38
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	42.38	44.36
TraesCS2D01G052700.1	Wheat	unclear	43.49	44.32
TraesCS5B01G302700.1	Wheat	vacuole	42.75	44.23
TraesCS7A01G400100.1	Wheat	unclear	43.12	44.19
KXG28418	Sorghum	vacuole	43.31	44.13
TraesCS2A01G052900.1	Wheat	unclear	43.31	44.13
TraesCS2D01G006000.1	Wheat	plastid	41.45	44.07
Os06t0548800-01	Rice	extracellular	43.49	44.07
Zm00001d037008_P001	Maize	golgi, vacuole	41.82	44.03
EER89908	Sorghum	plasma membrane, vacuole	44.05	43.97
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	43.31	43.96
EES13185	Sorghum	vacuole	44.61	43.96
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	42.94	43.83
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	42.01	43.8
TraesCS2B01G066400.1	Wheat	plastid	42.94	43.75
TraesCS2B01G066800.1	Wheat	vacuole	42.94	43.75
Zm00001d049169_P001	Maize	vacuole	42.94	43.75
HORVU2Hr1G008300.1	Barley	plastid	42.75	43.73
TraesCS4B01G358600.1	Wheat	golgi	42.19	43.4
Os06t0549633-00	Rice	vacuole	42.57	43.37
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	42.57	43.37
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	41.64	43.33
TraesCS4D01G101000.1	Wheat	golgi	43.68	43.28
TraesCS3B01G070000.1	Wheat	mitochondrion	22.68	43.26
HORVU7Hr1G093940.1	Barley	vacuole	42.57	43.21
TraesCS4A01G212100.1	Wheat	vacuole	43.49	43.17
TraesCS3A01G111600.1	Wheat	vacuole	42.57	43.13
Zm00001d046319_P001	Maize	vacuole	42.01	42.97
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	44.8	42.96
HORVU2Hr1G008310.1	Barley	golgi, vacuole	43.31	42.91
TraesCS4B01G104000.1	Wheat	vacuole	43.31	42.83
EER89907	Sorghum	plasma membrane, vacuole	41.82	42.78
HORVU4Hr1G017270.1	Barley	vacuole	43.12	42.73
TraesCS2B01G016900.1	Wheat	vacuole	41.08	42.66
KXG26140	Sorghum	plasma membrane	42.38	42.62
TraesCS2D01G543700.1	Wheat	unclear	44.42	42.6
Solyc04g080400.1.1	Tomato	extracellular	44.61	42.55
HORVU2Hr1G013930.1	Barley	golgi, vacuole	43.12	42.49
TraesCS4B01G222500.1	Wheat	plasma membrane	44.42	42.23
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	40.71	42.12
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	40.71	41.95
TraesCS7A01G353800.1	Wheat	vacuole	40.52	41.92
TraesCS7B01G273800.1	Wheat	plasma membrane	40.52	41.84
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	40.52	41.76
TraesCS7B01G273900.1	Wheat	vacuole	40.33	41.73
TraesCS7D01G472000.1	Wheat	vacuole	40.33	41.57
HORVU7Hr1G089190.1	Barley	vacuole	40.52	41.52
Os02t0235900-01	Rice	plasma membrane, vacuole	43.68	41.45
TraesCS4A01G081300.1	Wheat	unclear	43.49	41.42
TraesCS2A01G005700.1	Wheat	vacuole	38.1	41.41
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	44.05	41.36
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	33.64	41.32
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	44.61	41.31
TraesCS2D01G052400.1	Wheat	vacuole	30.86	41.29
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	44.05	41.22
Os11t0495950-00	Rice	plasma membrane, vacuole	41.26	41.11
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	44.24	41.11
TraesCS2B01G145300.1	Wheat	plasma membrane	43.68	41.08
TraesCS4D01G223000.1	Wheat	plasma membrane	43.12	40.99
Zm00001d037009_P001	Maize	plasma membrane	44.05	40.44
Zm00001d016199_P001	Maize	mitochondrion	42.01	40.29
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.66	39.75
TraesCS2D01G126400.1	Wheat	golgi, vacuole	42.75	39.72
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	42.57	39.41
TraesCS2B01G145500.1	Wheat	vacuole	42.57	39.35
KXG29886	Sorghum	mitochondrion	42.38	39.24
KXG29885	Sorghum	plastid	34.57	37.13
HORVU7Hr1G089210.1	Barley	mitochondrion	41.64	36.48
HORVU7Hr1G026630.1	Barley	plastid	31.78	33.73
HORVU7Hr1G089260.1	Barley	mitochondrion	30.11	33.33

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:K4C7D5	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF53	SUPFAM:SSF56176	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc06g065060.1	EnsemblPlants:Solyc06g065060.1.1	UniParc:UPI00027672A3	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:40574290..40575906

Molecular Weight (calculated)

60803.5 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.151

Length

538 amino acids

Sequence
(BLAST)

001: MKISWFSFIF VLLVLSSASW STLADNHEEF IQCLSHNNQT SSNIYTPNNS SFQSILQFSI QNLRFNTSET PKPLVIVTPV SESEVQRVIL CAKKTGMHVR
101: VRGAGHDYEG LSYVSEVPFV IVDLINLRTI NVDVNDKSAW VEAGSTIGEL YYRIAEKSKT LGFPAGVCPT VGVGGHFSGG GYGVMLRKYG LAADNIVDAR
201: LIDANGRILD RASMGEDLFW AIRGGGGNSF GLVLAWKVKL VDVPEIVTVF TLDKTLEQNA TKLVHKWQYV APRFHQDLFI RILVSRLNSS NQGDDNNQQT
301: IVASFNSIFL GGIDRLLPIM QENFPELGLR RADCIEMSWI ESILYFAGFP TDGPLDVLLS RVQLSTRYFK AKSDYVYQPI PEGGLDGIWR FFFEDEAQSS
401: QVILSPYGGR MDEISPSAIP FPHRAGNLYK IQHLVYWDEE GEEVAERHIS WIRRLYSYMA PFVSKSPRAA YINYRDLDIG VNNIKGYTSY VQAKVWGIKY
501: FKNNFDRLVH VKTKVDPSNF FRNEQSIPSL TQWKNKGE

Best Arabidopsis Sequence Match ( AT5G44440.2 )
(BLAST)

001: MGNFFLRNFV LGKKKENKLC ENSCQNLKVF LIFKILGFSF STSKLCRVEK LFPYKITQSL HSQYYPPILE MEFSSFLFTI LLFSLNISPL VSAHGSNHED
101: FLKCLSYRMN DNTVEPKVIH TSKDSSFFSI LDSSIQNPRF SVSETPKPVS IITPVKASDV QTVIRCAQLH GIHVRTRSAG HCYEGLSYIA YNKPFAVIDL
201: RNLRSISLDV DNRTGWVQTG ATAGELYYEI GKTTKSLAFP AGIHPTVGVG GQFSGGGYGT LLRKYGLAAD NIIDALVVDA SGRILDRQAM GEDYFWAIRG
301: GGGSSFGVIL SWKVKLVDVP STITVFKVQK TSKKEAVRII KKWQYAADKV PDDLFIRTTL ERSNKNAVHA LFTGLYIGPV NNLLALMEEK FPELGLEKEG
401: CEEMSWIESV LWFADFPKGE SLGVLTNRER TSLSFKGKDD FVQEPIPEAA IQEIWRRLEA PEARLGKIIL TPFGGKMSEM AEYETPFPHR GGNLYEIQYV
501: AYWREEEDKN KTETDKYLKW VDSVYEFMTP YVSKSPRGAY VNFKDMDLGM YLGKKKTKYE EGKSWGVKYF KNNFERLVRV KTRVDPTDFF CDEQSIPLVN
601: KVT

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44440]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.