Factsheet for PGSC0003DMT400080465

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080467	Potato	vacuole	92.61	69.89
Solyc06g065060.1.1	Tomato	extracellular	92.12	69.52
PGSC0003DMT400080468	Potato	vacuole	83.99	64.58
PGSC0003DMT400054571	Potato	cytosol	52.96	52.96
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	54.19	51.04
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.6	48.76
KRH58388	Soybean	vacuole	64.29	47.71
PGSC0003DMT400054385	Potato	plastid	58.13	47.68
KRH42266	Soybean	vacuole	63.05	47.5
PGSC0003DMT400054564	Potato	cytosol, plastid	57.39	47.17
KRH58389	Soybean	nucleus	61.33	46.46
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	59.85	45.85
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	50.49	45.76
KRH58387	Soybean	plastid, vacuole	61.82	45.72
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	57.64	45.61
KRH58344	Soybean	vacuole	58.13	44.53
TraesCS1D01G443200.1	Wheat	cytosol	34.24	43.99
PGSC0003DMT400054386	Potato	vacuole	57.39	43.8
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	23.15	42.92
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	55.91	40.97
PGSC0003DMT400012979	Potato	cytosol	39.9	40.7
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	53.45	40.64
PGSC0003DMT400089776	Potato	golgi, vacuole	54.68	40.59
PGSC0003DMT400086243	Potato	vacuole	52.22	40.3
PGSC0003DMT400009569	Potato	cytosol	47.04	40.13
TraesCS7B01G026000.1	Wheat	cytosol	32.76	40.06
HORVU7Hr1G089270.1	Barley	vacuole	51.97	39.66
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	51.48	39.29
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	40.15	39.28
TraesCS1D01G338700.1	Wheat	plasma membrane	51.72	39.18
TraesCS2B01G172300.1	Wheat	vacuole	50.99	39.13
TraesCS2A01G051500.1	Wheat	peroxisome	32.76	39.0
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	50.74	38.94
HORVU2Hr1G008270.1	Barley	peroxisome	29.8	38.91
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.23	38.73
Os06t0548100-00	Rice	golgi	50.99	38.69
KXG20146	Sorghum	extracellular	50.74	38.65
TraesCS2B01G017300.1	Wheat	plastid	38.92	38.63
TraesCS1B01G469800.1	Wheat	vacuole	50.99	38.48
KXG20147	Sorghum	vacuole	50.74	38.43
PGSC0003DMT400046308	Potato	extracellular	51.48	38.42
PGSC0003DMT400043091	Potato	extracellular	50.0	38.37
Zm00001d046322_P001	Maize	extracellular	50.0	38.23
TraesCS2D01G151500.1	Wheat	vacuole	49.51	38.0
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	50.25	37.92
TraesCS1D01G433600.1	Wheat	vacuole	50.25	37.78
TraesCS1B01G456900.1	Wheat	vacuole	46.31	37.75
HORVU1Hr1G092680.1	Barley	golgi, vacuole	49.51	37.5
TraesCS7D01G368800.1	Wheat	vacuole	48.03	37.5
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	49.51	37.43
TraesCS7B01G273700.1	Wheat	vacuole	47.78	37.31
Os06t0548200-01	Rice	extracellular	49.01	37.27
EER89910	Sorghum	vacuole	48.52	37.24
TraesCS7A01G353900.1	Wheat	vacuole	47.54	37.19
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	50.74	37.18
TraesCS7A01G354000.1	Wheat	vacuole	47.29	37.14
TraesCS7D01G368700.1	Wheat	unclear	47.29	37.14
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	47.29	37.07
TraesCS7A01G354100.1	Wheat	vacuole	39.66	37.01
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	51.48	36.99
TraesCS7B01G273600.1	Wheat	vacuole	47.04	36.94
TraesCS1A01G424100.1	Wheat	vacuole	46.31	36.86
HORVU7Hr1G089160.3	Barley	vacuole	47.54	36.76
PGSC0003DMT400057528	Potato	extracellular	48.52	36.62
TraesCS2B01G572400.1	Wheat	unclear	47.78	36.6
TraesCS2A01G542600.1	Wheat	vacuole	47.78	36.53
KXG20949	Sorghum	vacuole	48.52	36.41
TraesCS4B01G391900.1	Wheat	vacuole	45.81	36.33
TraesCS5A01G261400.1	Wheat	vacuole	46.8	36.19
TraesCS5D01G268800.1	Wheat	vacuole	46.8	36.19
Os06t0549600-01	Rice	extracellular	46.8	36.12
TraesCS5D01G309100.1	Wheat	vacuole	46.31	36.08
EES13185	Sorghum	vacuole	48.52	36.08
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	47.04	36.04
TraesCS2A01G052800.1	Wheat	plastid, vacuole	46.55	36.0
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.8	35.98
Zm00001d046318_P001	Maize	vacuole	47.04	35.97
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	46.06	35.96
Zm00001d037005_P001	Maize	vacuole	46.31	35.88
TraesCS2B01G066900.1	Wheat	nucleus, unclear	46.55	35.86
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	46.06	35.76
TraesCS7D01G393900.1	Wheat	vacuole	46.06	35.76
TraesCSU01G034600.1	Wheat	vacuole	45.32	35.73
TraesCS2A01G052600.1	Wheat	vacuole	46.8	35.71
TraesCS7A01G400100.1	Wheat	unclear	46.06	35.62
Os06t0548800-01	Rice	extracellular	46.55	35.59
TraesCS5B01G302700.1	Wheat	vacuole	45.57	35.58
TraesCS7A01G126600.1	Wheat	vacuole	45.57	35.58
HORVU2Hr1G122590.1	Barley	vacuole	46.8	35.51
Os06t0549900-01	Rice	extracellular	46.06	35.42
TraesCS2D01G052700.1	Wheat	unclear	46.06	35.42
TraesCS2D01G006000.1	Wheat	plastid	44.09	35.38
Os06t0549300-00	Rice	extracellular	45.57	35.37
HORVU2Hr1G008300.1	Barley	plastid	45.81	35.36
Zm00001d046319_P001	Maize	vacuole	45.81	35.36
TraesCS2D01G052300.1	Wheat	plastid	45.81	35.29
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	44.83	35.27
TraesCS2B01G066400.1	Wheat	plastid	45.81	35.23
HORVU2Hr1G000540.1	Barley	golgi, vacuole	47.04	35.17
TraesCS4D01G101000.1	Wheat	golgi	47.04	35.17
TraesCS3B01G070000.1	Wheat	mitochondrion	24.38	35.11
TraesCS2A01G052900.1	Wheat	unclear	45.57	35.04
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	44.58	35.01
HORVU4Hr1G017270.1	Barley	vacuole	46.8	34.99
EER89909	Sorghum	extracellular, plasma membrane, vacuole	45.32	34.98
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	45.57	34.91
TraesCS7B01G273500.1	Wheat	plastid	46.55	34.81
HORVU7Hr1G093940.1	Barley	vacuole	45.32	34.72
TraesCS4A01G212100.1	Wheat	vacuole	46.31	34.69
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	44.58	34.67
Os06t0549633-00	Rice	vacuole	45.07	34.66
TraesCS2B01G066800.1	Wheat	vacuole	45.07	34.66
TraesCS7A01G353800.1	Wheat	vacuole	44.34	34.62
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	44.34	34.62
EER89907	Sorghum	plasma membrane, vacuole	44.83	34.6
TraesCS4B01G104000.1	Wheat	vacuole	46.31	34.56
TraesCS7B01G273800.1	Wheat	plasma membrane	44.34	34.55
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	44.83	34.54
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	44.34	34.48
TraesCS7D01G472000.1	Wheat	vacuole	44.34	34.48
HORVU2Hr1G008310.1	Barley	golgi, vacuole	46.06	34.44
HORVU2Hr1G013930.1	Barley	golgi, vacuole	46.31	34.43
TraesCS7B01G273900.1	Wheat	vacuole	44.09	34.42
HORVU7Hr1G089190.1	Barley	vacuole	44.34	34.29
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	47.54	34.28
KXG28418	Sorghum	vacuole	44.58	34.28
TraesCS4B01G358600.1	Wheat	golgi	44.09	34.23
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	44.34	34.09
TraesCS2D01G543700.1	Wheat	unclear	47.04	34.05
TraesCS2B01G016900.1	Wheat	vacuole	43.35	33.98
EER89908	Sorghum	plasma membrane, vacuole	45.07	33.95
Zm00001d049169_P001	Maize	vacuole	44.09	33.9
TraesCS3A01G111600.1	Wheat	vacuole	44.34	33.9
Os02t0235900-01	Rice	plasma membrane, vacuole	47.04	33.69
TraesCS4B01G222500.1	Wheat	plasma membrane	46.55	33.39
KXG26140	Sorghum	plasma membrane	43.84	33.27
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	42.12	33.27
Os11t0495950-00	Rice	plasma membrane, vacuole	43.84	32.96
Zm00001d037008_P001	Maize	golgi, vacuole	41.38	32.88
TraesCS2B01G145300.1	Wheat	plasma membrane	46.31	32.87
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	46.31	32.81
TraesCS2A01G005700.1	Wheat	vacuole	39.9	32.73
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	46.55	32.64
TraesCS4A01G081300.1	Wheat	unclear	45.32	32.57
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	46.55	32.53
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	46.06	32.52
TraesCS4D01G223000.1	Wheat	plasma membrane	45.32	32.51
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	18.97	32.22
Zm00001d016199_P001	Maize	mitochondrion	44.34	32.09
Zm00001d037009_P001	Maize	plasma membrane	45.07	31.23
KXG29886	Sorghum	mitochondrion	44.34	30.98
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	44.34	30.98
TraesCS2D01G126400.1	Wheat	golgi, vacuole	44.09	30.92
TraesCS2B01G145500.1	Wheat	vacuole	44.09	30.76
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	32.51	30.14
HORVU7Hr1G089210.1	Barley	mitochondrion	44.83	29.64
TraesCS2D01G052400.1	Wheat	vacuole	28.82	29.1
HORVU7Hr1G026630.1	Barley	plastid	36.21	28.99
KXG29885	Sorghum	plastid	35.71	28.94
HORVU7Hr1G089260.1	Barley	mitochondrion	29.56	24.69

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1D3J3	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400031325	PGSC:PGSC0003DMG400031325	EnsemblPlants:PGSC0003DMT400080465	PFscan:PS51387	PANTHER:PTHR32448
PANTHER:PTHR32448:SF53	SUPFAM:SSF56176	UniParc:UPI000294907D	SEG:seg	:	:

Description

Nectarin 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400031325]

Coordinates

chr6:+:46990200..46991578

Molecular Weight (calculated)

45910.0 Da

IEP (calculated)

8.691

GRAVY (calculated)

-0.168

Length

406 amino acids

Sequence
(BLAST)

001: MHIRVRGAGH DYEGLSYVSE VPFVIVDLIN LRTINVDVND KSAWVEAGST IGELYYRIAE KSKTLGFPAG VCPTVGVGGH FSGGGYGVML RKYGLAADNI
101: VDARLIDANG RILDRASMGE DLFWAIRGGG GNTFGLVLAW KIKLVDVPEI VTVFTLDKTL EQNATKLVHK WQYVAPRFHE DLFIRILVSR LNSSNQGDGF
201: PTDGPLDVLL SRVQFSTRYF KAKSDYVYQP IPEGGLEGIW RFFFEDEAQS SQVMILNPYG GRMDEISASA IPFPHRAGNL YKIQHLVYWD EEGEEVAERH
301: ISWIRRLYSY MAPFVSKLPR AAYINYRDLD IGVNNIKGYT SYVQAKVWGI KYFKNNFDRL VHVKTKVDPS NFFRNEQSIP SLLSGRTKVI NEVHHSIKNN
401: MMHAII

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.