Factsheet for PGSC0003DMT400036039

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057528	Potato	extracellular	84.12	86.62
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	72.38	74.67
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	65.7	64.65
PGSC0003DMT400012979	Potato	cytosol	45.31	63.07
PGSC0003DMT400086243	Potato	vacuole	48.19	50.76
PGSC0003DMT400080465	Potato	cytosol	37.18	50.74
CDX79010	Canola	cytosol	24.01	49.81
CDX79034	Canola	plastid	46.75	49.71
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	46.57	49.43
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	46.57	49.43
CDX82800	Canola	extracellular	46.39	49.23
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	46.39	49.23
PGSC0003DMT400054571	Potato	cytosol	35.92	49.01
Bra013501.1-P	Field mustard	vacuole	46.93	48.87
AT4G20860.1	Thale cress	vacuole	46.39	48.49
PGSC0003DMT400054385	Potato	plastid	42.42	47.47
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	38.27	47.32
PGSC0003DMT400080467	Potato	vacuole	45.85	47.21
PGSC0003DMT400080468	Potato	vacuole	44.95	47.16
TraesCS1D01G443200.1	Wheat	cytosol	26.9	47.15
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	36.64	47.1
Bra033740.1-P	Field mustard	golgi	46.03	46.62
PGSC0003DMT400054564	Potato	cytosol, plastid	41.52	46.56
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.23	46.12
AT5G44360.2	Thale cress	golgi	45.49	45.99
PGSC0003DMT400054386	Potato	vacuole	43.86	45.68
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	43.68	45.66
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	43.86	45.51
TraesCS7A01G354100.1	Wheat	vacuole	35.56	45.29
TraesCS7B01G026000.1	Wheat	cytosol	26.9	44.88
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	41.88	44.79
CDY68914	Canola	golgi, plastid	34.66	44.34
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	44.22	44.22
PGSC0003DMT400046308	Potato	extracellular	43.32	44.12
KXG20146	Sorghum	extracellular	42.42	44.09
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	32.85	43.86
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	41.7	43.67
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	40.43	43.66
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.52	43.53
Zm00001d046322_P001	Maize	extracellular	41.7	43.5
HORVU7Hr1G089270.1	Barley	vacuole	41.52	43.23
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.34	43.05
TraesCS1D01G338700.1	Wheat	plasma membrane	41.52	42.91
TraesCS2A01G051500.1	Wheat	peroxisome	26.35	42.82
TraesCS2B01G172300.1	Wheat	vacuole	40.79	42.72
PGSC0003DMT400043091	Potato	extracellular	40.61	42.53
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	39.89	42.5
PGSC0003DMT400009569	Potato	cytosol	36.46	42.44
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	41.16	42.38
Os06t0549633-00	Rice	vacuole	40.25	42.23
TraesCS3B01G070000.1	Wheat	mitochondrion	21.48	42.2
TraesCS1B01G469800.1	Wheat	vacuole	40.97	42.19
TraesCS7B01G273500.1	Wheat	plastid	41.34	42.17
TraesCS2D01G151500.1	Wheat	vacuole	40.25	42.16
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.79	42.09
Zm00001d037005_P001	Maize	vacuole	39.71	41.98
TraesCS2B01G017300.1	Wheat	plastid	30.87	41.81
KXG20147	Sorghum	vacuole	40.43	41.79
Os06t0548100-00	Rice	golgi	40.25	41.68
PGSC0003DMT400089776	Potato	golgi, vacuole	41.16	41.68
TraesCS1B01G456900.1	Wheat	vacuole	37.36	41.57
TraesCS5D01G268800.1	Wheat	vacuole	39.35	41.52
TraesCS1D01G433600.1	Wheat	vacuole	40.43	41.48
EER89910	Sorghum	vacuole	39.53	41.4
TraesCS7A01G354000.1	Wheat	vacuole	38.63	41.39
TraesCS7A01G126600.1	Wheat	vacuole	38.81	41.35
TraesCS7B01G273600.1	Wheat	vacuole	38.45	41.2
TraesCS7D01G368700.1	Wheat	unclear	38.45	41.2
TraesCS1A01G424100.1	Wheat	vacuole	37.91	41.18
Os06t0549900-01	Rice	extracellular	39.17	41.1
EER89909	Sorghum	extracellular, plasma membrane, vacuole	38.99	41.06
Os06t0548800-01	Rice	extracellular	39.35	41.05
TraesCS5A01G261400.1	Wheat	vacuole	38.81	40.95
Zm00001d046319_P001	Maize	vacuole	38.63	40.68
Zm00001d046318_P001	Maize	vacuole	38.99	40.68
HORVU1Hr1G092680.1	Barley	golgi, vacuole	39.35	40.67
Os06t0548200-01	Rice	extracellular	39.17	40.64
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.51	40.59
HORVU7Hr1G089160.3	Barley	vacuole	38.45	40.57
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.34	40.53
HORVU2Hr1G008270.1	Barley	peroxisome	22.74	40.51
EER89907	Sorghum	plasma membrane, vacuole	38.45	40.49
Os06t0549600-01	Rice	extracellular	38.45	40.49
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.45	40.42
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.63	40.38
TraesCS7A01G353900.1	Wheat	vacuole	37.73	40.27
TraesCS7A01G353800.1	Wheat	vacuole	37.73	40.19
TraesCS7B01G273700.1	Wheat	vacuole	37.73	40.19
TraesCS2B01G066900.1	Wheat	nucleus, unclear	38.09	40.04
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	37.55	40.0
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.09	39.96
TraesCS7B01G273800.1	Wheat	plasma membrane	37.55	39.92
TraesCS7B01G273900.1	Wheat	vacuole	37.36	39.81
TraesCS7D01G368800.1	Wheat	vacuole	37.36	39.81
TraesCS2B01G066400.1	Wheat	plastid	37.91	39.77
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	36.82	39.69
HORVU2Hr1G000540.1	Barley	golgi, vacuole	38.81	39.59
TraesCS2B01G066800.1	Wheat	vacuole	37.73	39.58
TraesCS3A01G111600.1	Wheat	vacuole	37.91	39.55
TraesCS2D01G006000.1	Wheat	plastid	36.1	39.53
EER89908	Sorghum	plasma membrane, vacuole	38.45	39.52
TraesCS2D01G052300.1	Wheat	plastid	37.55	39.47
Os06t0549300-00	Rice	extracellular	37.18	39.39
TraesCS2B01G016900.1	Wheat	vacuole	36.82	39.38
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	37.0	39.27
KXG26140	Sorghum	plasma membrane	37.91	39.25
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	37.55	39.25
TraesCS7A01G400100.1	Wheat	unclear	37.18	39.24
TraesCS5B01G302700.1	Wheat	vacuole	36.82	39.23
Zm00001d049169_P001	Maize	vacuole	37.36	39.2
TraesCS2A01G052600.1	Wheat	vacuole	37.55	39.1
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	36.82	39.08
TraesCS7D01G472000.1	Wheat	vacuole	36.82	39.08
HORVU7Hr1G089190.1	Barley	vacuole	37.0	39.05
KXG28418	Sorghum	vacuole	37.18	39.02
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.18	39.02
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	36.82	39.01
TraesCS2B01G572400.1	Wheat	unclear	37.18	38.87
TraesCS2D01G052700.1	Wheat	unclear	37.0	38.83
TraesCS7D01G393900.1	Wheat	vacuole	36.64	38.81
TraesCS5D01G309100.1	Wheat	vacuole	36.46	38.77
Zm00001d037008_P001	Maize	golgi, vacuole	35.74	38.75
TraesCS2A01G052800.1	Wheat	plastid, vacuole	36.64	38.67
EES13185	Sorghum	vacuole	38.09	38.64
KXG20949	Sorghum	vacuole	37.73	38.63
HORVU2Hr1G008300.1	Barley	plastid	36.64	38.59
TraesCS2A01G052900.1	Wheat	unclear	36.64	38.45
TraesCS2A01G542600.1	Wheat	vacuole	36.82	38.42
Os11t0495950-00	Rice	plasma membrane, vacuole	37.36	38.33
HORVU2Hr1G122590.1	Barley	vacuole	37.0	38.32
TraesCSU01G034600.1	Wheat	vacuole	35.56	38.25
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	39.53	38.22
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	35.56	38.18
TraesCS2B01G145300.1	Wheat	plasma membrane	39.35	38.11
TraesCS4B01G391900.1	Wheat	vacuole	35.2	38.09
HORVU4Hr1G017270.1	Barley	vacuole	37.18	37.94
HORVU7Hr1G093940.1	Barley	vacuole	36.1	37.74
TraesCS4B01G222500.1	Wheat	plasma membrane	38.45	37.63
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	39.17	37.48
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	38.81	37.39
TraesCS2A01G005700.1	Wheat	vacuole	33.39	37.37
TraesCS4D01G223000.1	Wheat	plasma membrane	38.09	37.28
TraesCS4D01G101000.1	Wheat	golgi	36.46	37.2
TraesCS4B01G358600.1	Wheat	golgi	35.02	37.09
TraesCS4A01G212100.1	Wheat	vacuole	36.28	37.08
Os02t0235900-01	Rice	plasma membrane, vacuole	37.91	37.04
TraesCS4A01G081300.1	Wheat	unclear	37.73	36.99
HORVU2Hr1G008310.1	Barley	golgi, vacuole	36.1	36.83
TraesCS4B01G104000.1	Wheat	vacuole	36.1	36.76
Zm00001d016199_P001	Maize	mitochondrion	37.0	36.54
HORVU2Hr1G013930.1	Barley	golgi, vacuole	35.92	36.45
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	33.94	36.36
TraesCS2D01G543700.1	Wheat	unclear	36.82	36.36
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	28.7	36.3
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	37.91	36.14
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	37.73	35.97
TraesCS2B01G145500.1	Wheat	vacuole	37.73	35.91
TraesCS2D01G126400.1	Wheat	golgi, vacuole	37.18	35.58
KXG29886	Sorghum	mitochondrion	37.18	35.46
Zm00001d037009_P001	Maize	plasma membrane	37.18	35.15
HORVU7Hr1G089210.1	Barley	mitochondrion	38.63	34.85
TraesCS2D01G052400.1	Wheat	vacuole	25.27	34.83
KXG29885	Sorghum	plastid	30.32	33.53
HORVU7Hr1G026630.1	Barley	plastid	29.42	32.15
HORVU7Hr1G089260.1	Barley	mitochondrion	26.35	30.04

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1B364	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400013883	PGSC:PGSC0003DMG400013883	EnsemblPlants:PGSC0003DMT400036039	ScanProsite:PS00862
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000296349E
SEG:seg	:	:	:	:	:

Description

FAD-linked oxidoreductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400013883]

Coordinates

chr2:+:35376076..35377740

Molecular Weight (calculated)

63206.1 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.337

Length

554 amino acids

Sequence
(BLAST)

001: MASLQILSLL LFLLFLAKCY YSKEEDLVQC LSKYSETNVT QNIYTLNSPT YSSILEYAQK NPRWLNSSHP IFIVSPRKES DIKPVILCAK ILGLQIKIKS
101: GGHDYEGISF RSETPFVMLD LSNLDKIEID LNEGTVWAQA GATLGQLYYA IAKKSKVHAF PGGVCFTVGT GGIISGGGLG SLMRKFGLAS DNVVDARVID
201: VNGNILDRKK MEEDLFWAIR GGGGASFGVI LAWKLKLVRV PDKVTVFTVY KKLDSNQNLL QKWQKTSHQL PDGLFIRTVI QNDGTGNDKY ALMFFQALYL
301: GPVDELIPLL KEKFPEFDLE KKDCFQEPVV DCSNMPCIRK ECRESSWIGS VLYFYGKRTN EPLEVLLEKS IPTQKNYFKA TSDFVKTPIP ESGWEMVKRL
401: FLEEERPQII MEPLGGKLDE ISESEIPFPH RKGNLYNIQY LVNWGDNSES ISSQKIEWLR KLYKKMEPYV ANSPRSAYLN YRDLDLGTNQ DYYNYSKAKI
501: WGEKYFKGNF ERLAKVKSKV DPNNFFRNEQ SIPPYHTDSL RRLDPMSTGL HQDV

Best Arabidopsis Sequence Match ( AT4G20860.1 )
(BLAST)

001: MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS
101: RKLGVQVRTM SGGHDYEGLS YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG VGGHISGGGF GTIMRKYGLA
201: SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301: RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP
401: LMIFEPLGGK ISKISETESP YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG STKGINTSFE DARKWGETYF
501: KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF

Arabidopsis Description

FAD-OXRBerberine bridge enzyme-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.