Factsheet for PGSC0003DMT400057680

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079450.1.1	Tomato	extracellular	94.04	94.04
PGSC0003DMT400057528	Potato	extracellular	75.23	75.09
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	74.67	72.38
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	63.13	60.21
PGSC0003DMT400012979	Potato	cytosol	43.76	59.05
PGSC0003DMT400080465	Potato	cytosol	37.43	49.51
PGSC0003DMT400054571	Potato	cytosol	36.87	48.77
CDX79034	Canola	plastid	47.11	48.56
CDX82800	Canola	extracellular	46.93	48.28
Bra013501.1-P	Field mustard	vacuole	47.11	47.56
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	46.18	47.51
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	46.18	47.51
PGSC0003DMT400086243	Potato	vacuole	46.37	47.34
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	46.0	47.32
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	37.8	47.1
PGSC0003DMT400054385	Potato	plastid	43.2	46.87
AT4G20860.1	Thale cress	vacuole	46.18	46.79
PGSC0003DMT400054564	Potato	cytosol, plastid	43.02	46.76
PGSC0003DMT400080468	Potato	vacuole	45.62	46.4
PGSC0003DMT400080467	Potato	vacuole	46.18	46.1
Bra033740.1-P	Field mustard	golgi	46.93	46.07
PGSC0003DMT400054386	Potato	vacuole	45.44	45.86
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	45.25	45.85
AT5G44360.2	Thale cress	golgi	46.55	45.62
TraesCS1D01G443200.1	Wheat	cytosol	26.82	45.57
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	37.43	44.87
CDY68914	Canola	golgi, plastid	35.57	44.11
CDX79010	Canola	cytosol	21.79	43.82
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.61	43.8
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	41.53	43.47
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.69	43.38
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.64	43.29
PGSC0003DMT400046308	Potato	extracellular	43.76	43.2
KXG20146	Sorghum	extracellular	42.83	43.15
TraesCS7A01G354100.1	Wheat	vacuole	34.82	42.99
TraesCS1D01G338700.1	Wheat	plasma membrane	42.46	42.54
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	42.27	42.51
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.46	42.38
Zm00001d046322_P001	Maize	extracellular	41.9	42.37
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.71	42.11
TraesCS2B01G172300.1	Wheat	vacuole	41.34	41.97
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.71	41.71
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	40.22	41.7
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	43.02	41.7
TraesCS1B01G469800.1	Wheat	vacuole	41.71	41.64
PGSC0003DMT400043091	Potato	extracellular	40.97	41.59
TraesCS7B01G026000.1	Wheat	cytosol	25.7	41.57
Os06t0548100-00	Rice	golgi	41.34	41.5
TraesCS2D01G151500.1	Wheat	vacuole	40.78	41.4
TraesCS1B01G456900.1	Wheat	vacuole	38.36	41.37
HORVU7Hr1G089270.1	Barley	vacuole	40.97	41.35
PGSC0003DMT400089776	Potato	golgi, vacuole	41.71	40.95
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	39.29	40.58
TraesCS1D01G433600.1	Wheat	vacuole	40.78	40.56
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	31.1	40.24
TraesCS1A01G424100.1	Wheat	vacuole	38.17	40.2
TraesCS2A01G051500.1	Wheat	peroxisome	25.51	40.18
Os06t0549633-00	Rice	vacuole	39.48	40.15
PGSC0003DMT400009569	Potato	cytosol	35.57	40.13
HORVU1Hr1G092680.1	Barley	golgi, vacuole	40.04	40.11
TraesCS2B01G017300.1	Wheat	plastid	30.35	39.85
KXG20147	Sorghum	vacuole	39.66	39.74
TraesCS7A01G354000.1	Wheat	vacuole	38.17	39.65
Zm00001d046319_P001	Maize	vacuole	38.73	39.54
Zm00001d037005_P001	Maize	vacuole	38.55	39.5
TraesCS7B01G273600.1	Wheat	vacuole	37.99	39.46
TraesCS5D01G268800.1	Wheat	vacuole	38.55	39.43
TraesCS7A01G126600.1	Wheat	vacuole	38.17	39.42
Os06t0549900-01	Rice	extracellular	38.73	39.39
EER89909	Sorghum	extracellular, plasma membrane, vacuole	38.55	39.35
TraesCS7B01G273800.1	Wheat	plasma membrane	38.17	39.35
EER89910	Sorghum	vacuole	38.73	39.32
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.34	39.29
TraesCS7D01G368700.1	Wheat	unclear	37.8	39.27
TraesCS7B01G273900.1	Wheat	vacuole	37.99	39.23
Os06t0548800-01	Rice	extracellular	38.73	39.17
TraesCS5A01G261400.1	Wheat	vacuole	38.17	39.05
TraesCS7B01G273500.1	Wheat	plastid	39.48	39.04
TraesCS7A01G353800.1	Wheat	vacuole	37.8	39.04
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	37.8	39.04
TraesCS3B01G070000.1	Wheat	mitochondrion	20.48	39.01
TraesCS2B01G066800.1	Wheat	vacuole	38.17	38.83
EER89907	Sorghum	plasma membrane, vacuole	37.99	38.78
HORVU7Hr1G089160.3	Barley	vacuole	37.8	38.67
HORVU7Hr1G089190.1	Barley	vacuole	37.8	38.67
KXG20949	Sorghum	vacuole	38.92	38.63
TraesCS2B01G066900.1	Wheat	nucleus, unclear	37.8	38.52
EES13185	Sorghum	vacuole	39.11	38.46
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	37.24	38.31
HORVU2Hr1G008270.1	Barley	peroxisome	22.16	38.26
Zm00001d046318_P001	Maize	vacuole	37.8	38.23
Os06t0548200-01	Rice	extracellular	37.99	38.2
TraesCS2D01G052300.1	Wheat	plastid	37.43	38.14
KXG26140	Sorghum	plasma membrane	37.99	38.13
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	37.62	38.11
TraesCS2A01G052800.1	Wheat	plastid, vacuole	37.24	38.1
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	16.95	38.08
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.43	38.07
TraesCS3A01G111600.1	Wheat	vacuole	37.62	38.04
Os06t0549600-01	Rice	extracellular	37.24	38.02
TraesCS2A01G052600.1	Wheat	vacuole	37.62	37.97
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	37.24	37.95
TraesCS2D01G006000.1	Wheat	plastid	35.75	37.94
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	36.87	37.93
TraesCS7D01G472000.1	Wheat	vacuole	36.87	37.93
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	37.43	37.92
TraesCS5B01G302700.1	Wheat	vacuole	36.69	37.88
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	37.24	37.88
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	36.87	37.86
HORVU2Hr1G122590.1	Barley	vacuole	37.62	37.76
TraesCS2A01G052900.1	Wheat	unclear	37.06	37.69
Os06t0549300-00	Rice	extracellular	36.69	37.67
TraesCS7A01G400100.1	Wheat	unclear	36.69	37.52
TraesCS2B01G066400.1	Wheat	plastid	36.87	37.5
TraesCS7D01G393900.1	Wheat	vacuole	36.5	37.48
Os02t0235900-01	Rice	plasma membrane, vacuole	39.48	37.39
TraesCS2D01G052700.1	Wheat	unclear	36.69	37.31
TraesCS4B01G391900.1	Wheat	vacuole	35.57	37.3
EER89908	Sorghum	plasma membrane, vacuole	37.43	37.29
Zm00001d016199_P001	Maize	mitochondrion	38.92	37.25
HORVU7Hr1G093940.1	Barley	vacuole	36.69	37.17
TraesCS2B01G572400.1	Wheat	unclear	36.69	37.17
TraesCS7B01G273700.1	Wheat	vacuole	35.94	37.12
TraesCS4B01G222500.1	Wheat	plasma membrane	39.11	37.1
TraesCS2A01G542600.1	Wheat	vacuole	36.69	37.1
TraesCSU01G034600.1	Wheat	vacuole	35.57	37.09
HORVU2Hr1G008300.1	Barley	plastid	36.31	37.07
TraesCS5D01G309100.1	Wheat	vacuole	35.94	37.04
HORVU2Hr1G000540.1	Barley	golgi, vacuole	37.43	37.02
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	35.57	37.02
Zm00001d037008_P001	Maize	golgi, vacuole	35.2	36.99
TraesCS7D01G368800.1	Wheat	vacuole	35.75	36.92
TraesCS7A01G353900.1	Wheat	vacuole	35.57	36.8
TraesCS4D01G223000.1	Wheat	plasma membrane	38.73	36.75
TraesCS2B01G016900.1	Wheat	vacuole	35.38	36.68
TraesCS4A01G081300.1	Wheat	unclear	38.55	36.64
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	35.2	36.56
TraesCS2B01G145300.1	Wheat	plasma membrane	38.92	36.54
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	38.92	36.47
HORVU2Hr1G008310.1	Barley	golgi, vacuole	36.87	36.46
HORVU4Hr1G017270.1	Barley	vacuole	36.87	36.46
KXG28418	Sorghum	vacuole	35.75	36.36
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	39.29	36.32
TraesCS4B01G358600.1	Wheat	golgi	35.2	36.14
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	34.45	35.99
Os11t0495950-00	Rice	plasma membrane, vacuole	36.13	35.93
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	38.73	35.92
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	38.36	35.83
KXG29886	Sorghum	mitochondrion	38.73	35.8
TraesCS4A01G212100.1	Wheat	vacuole	36.13	35.79
TraesCS4D01G101000.1	Wheat	golgi	36.13	35.73
TraesCS2D01G543700.1	Wheat	unclear	36.87	35.29
TraesCS4B01G104000.1	Wheat	vacuole	35.75	35.29
Zm00001d049169_P001	Maize	vacuole	34.64	35.23
TraesCS2A01G005700.1	Wheat	vacuole	32.4	35.15
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	37.24	34.42
Zm00001d037009_P001	Maize	plasma membrane	37.06	33.96
HORVU2Hr1G013930.1	Barley	golgi, vacuole	34.45	33.88
KXG29885	Sorghum	plastid	31.47	33.73
HORVU7Hr1G089210.1	Barley	mitochondrion	38.55	33.71
TraesCS2D01G126400.1	Wheat	golgi, vacuole	36.31	33.68
TraesCS2B01G145500.1	Wheat	vacuole	36.5	33.68
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	27.19	33.33
TraesCS2D01G052400.1	Wheat	vacuole	24.95	33.33
HORVU7Hr1G026630.1	Barley	plastid	29.61	31.36
HORVU7Hr1G089260.1	Barley	mitochondrion	26.44	29.22

Protein Annotations

EntrezGene:102584271	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1C1G9	InterPro:Oxid_FAD_bind_N
InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400022394	PGSC:PGSC0003DMG400022394	EnsemblPlants:PGSC0003DMT400057680
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	SignalP:SignalP-noTM
UniParc:UPI0002955555	RefSeq:XP_006347186.1	SEG:seg	:	:	:

Description

FAD-binding domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022394]

Coordinates

chr2:+:35147187..35148800

Molecular Weight (calculated)

61534.7 Da

IEP (calculated)

8.388

GRAVY (calculated)

-0.348

Length

537 amino acids

Sequence
(BLAST)

001: MGSLQIFSVL FFSLFLAKCC YSKEEYFVQC LSKYSEINIT QNIYTPGSPI YSSILEYAQK NPRWLNSSHP NFIASPKEES EIRPVILCSK KTGLQIKIKS
101: GGHDYEGISF RSESPFVMLD LGNLNKIKID LKEETIWVQT GATLGQLYYA IAKKSKVHAF PAGVCFSVGT GGIISGGGLG ALMRKFGLAA DNVVDARVMD
201: VNGKILDRKM NEDLFWAIRG GGGASFGVIL AWKLKLVRVP EKVTVFTIRR ELEGNLTLLR KWENIAHQLP EDLFVRAFVQ KGVFSAGNDT KNHVGFYIQG
301: QYIGPVDELI PLLNQYFPEF NLERKDCFKE NITADAEKEC FEVPWIRSVL YFSWRNPNDS LEVLLEKSIP THKDYHKGTS DFVKTPIPES GWEMVEKLFR
401: EEERPQMVFE PFGGKMYEIS ESEIPFPHRK GNLYTIQYFV SWDDNSESIS SQKIGWIRKL YKEMEPYVAK SPRSAYLNYR DFGLGTNEED YSYSKAKIWG
501: EKYFKGNFER LAKVKSKVDP KNFFRSEQSV TPYQLSY

Best Arabidopsis Sequence Match ( AT4G20860.1 )
(BLAST)

001: MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS
101: RKLGVQVRTM SGGHDYEGLS YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG VGGHISGGGF GTIMRKYGLA
201: SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301: RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP
401: LMIFEPLGGK ISKISETESP YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG STKGINTSFE DARKWGETYF
501: KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF

Arabidopsis Description

FAD-OXRBerberine bridge enzyme-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.