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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400057680 Potato extracellular, plasma membrane, vacuole 94.04 94.04
Solyc02g079460.1.1 Tomato extracellular, golgi, vacuole 77.65 78.38
Solyc02g079470.1.1 Tomato endoplasmic reticulum, vacuole 78.4 78.11
Solyc02g079440.1.1 Tomato nucleus 73.18 73.05
Solyc02g079480.1.1 Tomato plasma membrane, vacuole 60.89 58.29
CDX79034 Canola plastid 46.74 48.18
CDX82800 Canola extracellular 46.37 47.7
Bra013501.1-P Field mustard vacuole 46.74 47.18
CDX82785 Canola endoplasmic reticulum, extracellular, vacuole 45.81 47.13
Solyc02g070060.1.1 Tomato vacuole 46.0 46.96
Bra013478.1-P Field mustard endoplasmic reticulum, vacuole 45.62 46.93
CDY69774 Canola endoplasmic reticulum, extracellular, plastid, vacuole 45.62 46.93
Solyc06g065060.1.1 Tomato extracellular 46.93 46.84
Solyc06g065070.1.1 Tomato vacuole 46.55 46.64
Solyc02g070200.1.1 Tomato vacuole 46.37 46.03
AT4G20860.1 Thale cress vacuole 45.25 45.85
Bra033740.1-P Field mustard golgi 46.55 45.7
Solyc02g070110.1.1 Tomato extracellular, vacuole 45.07 45.66
AT5G44360.2 Thale cress golgi 46.55 45.62
Solyc10g054480.1.1 Tomato plastid 25.7 45.39
Solyc02g070130.1.1 Tomato vacuole 44.88 45.22
Solyc02g070180.1.1 Tomato plasma membrane, vacuole 45.44 45.19
TraesCS1D01G443200.1 Wheat cytosol 26.44 44.94
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 37.43 44.87
CDX79010 Canola cytosol 22.16 44.57
Solyc02g070170.1.1 Tomato extracellular, vacuole 43.76 43.93
CDY68914 Canola golgi, plastid 35.38 43.88
TraesCS1D01G338700.1 Wheat plasma membrane 42.83 42.91
TraesCS7A01G354100.1 Wheat vacuole 34.64 42.76
TraesCS7D01G369200.1 Wheat extracellular, vacuole 42.09 42.72
KXG20146 Sorghum extracellular 42.27 42.59
Solyc02g070070.1.1 Tomato extracellular 41.9 42.37
Solyc02g070090.1.1 Tomato extracellular 41.9 42.13
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 17.13 42.01
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 41.9 41.82
Zm00001d046322_P001 Maize extracellular 41.34 41.81
TraesCS2B01G172300.1 Wheat vacuole 41.15 41.78
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 41.71 41.71
TraesCS7A01G353700.1 Wheat extracellular, vacuole 41.15 41.54
TraesCS1B01G469800.1 Wheat vacuole 41.53 41.45
Solyc02g022850.1.1 Tomato vacuole 41.71 41.4
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 39.85 41.31
TraesCS2D01G151500.1 Wheat vacuole 40.6 41.21
Solyc09g072660.2.1 Tomato extracellular 42.09 41.17
TraesCS1B01G456900.1 Wheat vacuole 38.17 41.16
TraesCS7B01G026000.1 Wheat cytosol 25.33 40.96
Os06t0548100-00 Rice golgi 40.78 40.93
HORVU7Hr1G089270.1 Barley vacuole 40.41 40.79
Solyc02g069690.1.1 Tomato golgi, vacuole 41.53 40.77
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 39.11 40.38
TraesCS5D01G268800.1 Wheat vacuole 39.48 40.38
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 31.1 40.24
TraesCS1D01G433600.1 Wheat vacuole 40.41 40.19
Os06t0549633-00 Rice vacuole 39.48 40.15
TraesCS2B01G017300.1 Wheat plastid 30.54 40.1
TraesCS1A01G424100.1 Wheat vacuole 37.99 40.0
TraesCS5A01G261400.1 Wheat vacuole 39.11 40.0
HORVU1Hr1G092680.1 Barley golgi, vacuole 39.85 39.93
KXG20147 Sorghum vacuole 39.85 39.93
EER89910 Sorghum vacuole 39.29 39.89
TraesCS2A01G051500.1 Wheat peroxisome 25.33 39.88
TraesCS7A01G354000.1 Wheat vacuole 38.17 39.65
TraesCS7B01G273600.1 Wheat vacuole 38.17 39.65
Zm00001d037005_P001 Maize vacuole 38.55 39.5
TraesCS7D01G368700.1 Wheat unclear 37.8 39.27
TraesCS7A01G126600.1 Wheat vacuole 37.99 39.23
Os06t0549900-01 Rice extracellular 38.55 39.2
EER89909 Sorghum extracellular, plasma membrane, vacuole 38.36 39.16
TraesCS2B01G066800.1 Wheat vacuole 38.36 39.02
Os06t0548800-01 Rice extracellular 38.55 38.98
Zm00001d046319_P001 Maize vacuole 38.17 38.97
Zm00001d046318_P001 Maize vacuole 38.36 38.79
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 40.78 38.76
TraesCS2B01G066900.1 Wheat nucleus, unclear 37.99 38.71
TraesCS7B01G273500.1 Wheat plastid 39.11 38.67
HORVU7Hr1G089160.3 Barley vacuole 37.8 38.67
TraesCS7B01G273900.1 Wheat vacuole 37.43 38.65
TraesCS3B01G070000.1 Wheat mitochondrion 20.3 38.65
KXG20949 Sorghum vacuole 38.92 38.63
EER89907 Sorghum plasma membrane, vacuole 37.8 38.59
TraesCS7B01G273800.1 Wheat plasma membrane 37.43 38.58
EES13185 Sorghum vacuole 39.11 38.46
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.8 38.45
Os06t0548200-01 Rice extracellular 38.17 38.39
TraesCS2A01G052600.1 Wheat vacuole 37.99 38.35
TraesCS2D01G052300.1 Wheat plastid 37.62 38.33
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 37.62 38.33
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 37.8 38.3
TraesCS7A01G353800.1 Wheat vacuole 37.06 38.27
TraesCS7D01G369000.1 Wheat extracellular, vacuole 37.06 38.27
HORVU2Hr1G008270.1 Barley peroxisome 22.16 38.26
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 37.62 38.26
TraesCS3A01G111600.1 Wheat vacuole 37.8 38.23
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 37.62 38.11
TraesCS2A01G052800.1 Wheat plastid, vacuole 37.24 38.1
TraesCS2A01G052900.1 Wheat unclear 37.43 38.07
TraesCS7D01G393900.1 Wheat vacuole 37.06 38.05
KXG26140 Sorghum plasma membrane 37.8 37.94
TraesCS5B01G302700.1 Wheat vacuole 36.69 37.88
TraesCS2B01G066400.1 Wheat plastid 37.24 37.88
Os06t0549600-01 Rice extracellular 37.06 37.83
TraesCS2D01G006000.1 Wheat plastid 35.57 37.75
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 36.69 37.74
TraesCS7A01G400100.1 Wheat unclear 36.87 37.71
TraesCS2D01G052700.1 Wheat unclear 37.06 37.69
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 36.69 37.67
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 16.76 37.66
HORVU2Hr1G000540.1 Barley golgi, vacuole 37.99 37.57
HORVU7Hr1G089190.1 Barley vacuole 36.69 37.52
EER89908 Sorghum plasma membrane, vacuole 37.62 37.48
HORVU2Hr1G122590.1 Barley vacuole 37.24 37.38
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 36.31 37.36
TraesCS7D01G472000.1 Wheat vacuole 36.31 37.36
TraesCS7B01G273700.1 Wheat vacuole 36.13 37.31
Os06t0549300-00 Rice extracellular 36.31 37.28
HORVU2Hr1G008300.1 Barley plastid 36.5 37.26
TraesCS7A01G353900.1 Wheat vacuole 35.94 37.19
TraesCS7D01G368800.1 Wheat vacuole 35.94 37.12
TraesCS5D01G309100.1 Wheat vacuole 35.94 37.04
Zm00001d037008_P001 Maize golgi, vacuole 35.2 36.99
TraesCS2B01G572400.1 Wheat unclear 36.5 36.98
TraesCS4B01G391900.1 Wheat vacuole 35.2 36.91
TraesCS2A01G542600.1 Wheat vacuole 36.5 36.91
TraesCS2B01G016900.1 Wheat vacuole 35.57 36.87
HORVU7Hr1G093940.1 Barley vacuole 36.31 36.79
HORVU2Hr1G008310.1 Barley golgi, vacuole 37.06 36.65
TraesCSU01G034600.1 Wheat vacuole 35.01 36.5
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 35.01 36.43
TraesCS4B01G222500.1 Wheat plasma membrane 38.36 36.4
KXG28418 Sorghum vacuole 35.75 36.36
TraesCS2B01G145300.1 Wheat plasma membrane 38.73 36.36
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 38.73 36.3
Os11t0495950-00 Rice plasma membrane, vacuole 36.5 36.3
TraesCS4D01G223000.1 Wheat plasma membrane 38.17 36.22
Os02t0235900-01 Rice plasma membrane, vacuole 38.17 36.16
TraesCS4A01G081300.1 Wheat unclear 37.99 36.11
Zm00001d016199_P001 Maize mitochondrion 37.62 36.01
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 34.64 35.98
HORVU4Hr1G017270.1 Barley vacuole 36.31 35.91
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 34.26 35.8
TraesCS4A01G212100.1 Wheat vacuole 36.13 35.79
TraesCS4B01G358600.1 Wheat golgi 34.82 35.76
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 38.55 35.75
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 38.17 35.65
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 38.55 35.63
TraesCS4D01G101000.1 Wheat golgi 35.94 35.54
Solyc04g080400.1.1 Tomato extracellular 37.24 35.46
Zm00001d049169_P001 Maize vacuole 34.82 35.42
TraesCS2A01G005700.1 Wheat vacuole 32.59 35.35
TraesCS2D01G543700.1 Wheat unclear 36.69 35.12
TraesCS4B01G104000.1 Wheat vacuole 35.38 34.93
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 37.62 34.77
HORVU2Hr1G013930.1 Barley golgi, vacuole 35.2 34.62
KXG29886 Sorghum mitochondrion 37.24 34.42
Zm00001d037009_P001 Maize plasma membrane 37.24 34.13
TraesCS2D01G126400.1 Wheat golgi, vacuole 36.69 34.02
TraesCS2B01G145500.1 Wheat vacuole 36.87 34.02
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 27.37 33.56
TraesCS2D01G052400.1 Wheat vacuole 24.77 33.08
HORVU7Hr1G089210.1 Barley mitochondrion 37.62 32.9
KXG29885 Sorghum plastid 30.54 32.73
HORVU7Hr1G026630.1 Barley plastid 29.24 30.97
HORVU7Hr1G089260.1 Barley mitochondrion 26.07 28.81
Protein Annotations
Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1InterPro:BBEInterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016614GO:GO:0050660GO:GO:0055114
GO:GO:0071949InterPro:IPR016166InterPro:IPR016167UniProt:K4B9G8InterPro:Oxid_FAD_bind_NInterPro:Oxy_OxRdtase_FAD_BS
PFAM:PF01565PFAM:PF08031ScanProsite:PS00862PFscan:PS51387PANTHER:PTHR32448PANTHER:PTHR32448:SF36
SUPFAM:SSF56176SignalP:SignalP-noTMEnsemblPlantsGene:Solyc02g079450.1EnsemblPlants:Solyc02g079450.1.1UniParc:UPI0002768880SEG:seg
Description
No Description!
Coordinates
chr2:+:44009257..44010870
Molecular Weight (calculated)
61440.5 Da
IEP (calculated)
7.749
GRAVY (calculated)
-0.345
Length
537 amino acids
Sequence
(BLAST)
001: MASLQIFCVL LFSLFLAKCY YSKEEDFVQC LSKSPETNIT QNIYTPGSPI YSSILEYAQK NPRWLNSSHP NFIASPKEES EIRPVILCSK KTGLQIKIKS
101: GGHDYEGISF RSESPFVMLD LSNLNKIETD LNEETIWVQT GATLGQLYYA IAKKSKVHAF PGGVCFTVGT GGIISGGGLG ALMRKFGLAA DNVVDARVMD
201: VNGKILERKM NEDLFWAIRG GGGASFGVIL AWKLKLVRVP EKVTVFTIRR ELEGNLTLLR KWENIAYQLS EDLFVRAFVQ KGVFSGGNDT KNQVGFYFQG
301: QYIGPVDKLI PLLNQYFPEF NLERKDCFQE NITADAEKEC LEVPWIRSVL YFSWRNPNDS LEVLLEKSIP THKVYHKGTS DFVKIPIPES GWEMIEKLFR
401: EEERPQMVFE PLGGKMYEIS ESEIPFPHRK ENLYTIQYFV SWDDNSESVS SEKIGWIRKL YKEMEPYVAK SPRSAYLNYR DFGLGTNSED YSYSKAKIWG
501: EKYFKGNFEK LAKVKSKVDP KNFFRSEQSV TPYQLSY
Best Arabidopsis Sequence Match ( AT4G20860.1 )
(BLAST)
001: MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS
101: RKLGVQVRTM SGGHDYEGLS YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG VGGHISGGGF GTIMRKYGLA
201: SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301: RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP
401: LMIFEPLGGK ISKISETESP YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG STKGINTSFE DARKWGETYF
501: KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF
Arabidopsis Description
FAD-OXRBerberine bridge enzyme-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC6]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.