Factsheet for Solyc02g070070.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 26583031

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	93.41	92.88
Solyc09g072660.2.1	Tomato	extracellular	74.39	71.95
VIT_10s0003g05420.t01	Wine grape	vacuole	67.23	66.23
KRH42273	Soybean	nucleus	64.78	65.28
KRH36839	Soybean	nucleus	66.29	64.83
KRH58398	Soybean	plasma membrane, vacuole	64.41	64.41
Solyc02g069690.1.1	Tomato	golgi, vacuole	65.91	63.99
KRH11824	Soybean	nucleus	64.78	63.35
CDY43653	Canola	golgi	36.16	62.95
CDY70228	Canola	cytosol, golgi, peroxisome	36.16	62.34
CDY67309	Canola	endoplasmic reticulum, plasma membrane	62.34	61.98
Bra005392.1-P	Field mustard	plasma membrane	61.96	61.84
CDY31642	Canola	plasma membrane	59.13	61.69
CDX77568	Canola	endoplasmic reticulum, plasma membrane	61.96	61.61
CDX84280	Canola	plasma membrane	58.95	61.49
Bra014890.1-P	Field mustard	plasma membrane	61.58	61.24
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	61.21	60.86
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	61.21	60.86
AT2G34790.1	Thale cress	golgi, vacuole	60.83	60.71
KRH58399	Soybean	nucleus	60.64	60.3
CDY70679	Canola	cytosol, mitochondrion, peroxisome	26.37	60.09
KRH42274	Soybean	mitochondrion, nucleus	58.95	59.85
AT1G30760.2	Thale cress	golgi	62.15	59.78
Bra021930.1-P	Field mustard	plasma membrane	55.56	58.76
KRH42276	Soybean	nucleus	60.45	54.13
Solyc06g065070.1.1	Tomato	vacuole	52.54	52.05
Solyc06g065060.1.1	Tomato	extracellular	51.98	51.3
Solyc02g070110.1.1	Tomato	extracellular, vacuole	49.91	50.0
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	41.81	49.55
Solyc02g070130.1.1	Tomato	vacuole	49.72	49.53
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	48.78	47.96
Solyc02g070200.1.1	Tomato	vacuole	48.59	47.69
Solyc02g070170.1.1	Tomato	extracellular, vacuole	47.65	47.29
Solyc02g070060.1.1	Tomato	vacuole	46.7	47.15
Solyc10g054480.1.1	Tomato	plastid	26.74	46.71
Solyc02g070090.1.1	Tomato	extracellular	46.89	46.63
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.35	46.51
KRG99206	Soybean	extracellular, peroxisome	35.22	46.29
Solyc02g022850.1.1	Tomato	vacuole	45.76	44.92
Solyc02g079440.1.1	Tomato	nucleus	45.39	44.8
TraesCS1D01G443200.1	Wheat	cytosol	26.37	44.3
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	43.88	43.8
TraesCS7A01G354100.1	Wheat	vacuole	35.59	43.45
KXG20146	Sorghum	extracellular	43.5	43.34
TraesCS2B01G172300.1	Wheat	vacuole	43.13	43.29
HORVU1Hr1G092680.1	Barley	golgi, vacuole	43.69	43.28
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.18	43.24
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.7	42.92
TraesCS2D01G151500.1	Wheat	vacuole	42.75	42.91
TraesCS7B01G026000.1	Wheat	cytosol	26.74	42.77
HORVU2Hr1G008270.1	Barley	peroxisome	25.05	42.77
TraesCS1B01G456900.1	Wheat	vacuole	39.92	42.57
TraesCS1B01G469800.1	Wheat	vacuole	43.13	42.57
Zm00001d046322_P001	Maize	extracellular	42.56	42.56
TraesCS1D01G338700.1	Wheat	plasma membrane	42.94	42.54
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.94	42.46
TraesCS1D01G433600.1	Wheat	vacuole	43.13	42.41
TraesCS1A01G424100.1	Wheat	vacuole	40.49	42.16
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.24	42.12
TraesCS7D01G368800.1	Wheat	vacuole	41.24	42.12
HORVU7Hr1G089270.1	Barley	vacuole	42.18	42.11
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	41.81	41.97
TraesCS7B01G273700.1	Wheat	vacuole	41.05	41.92
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	42.0	41.92
Solyc02g079450.1.1	Tomato	extracellular	42.37	41.9
Os06t0548100-00	Rice	golgi	42.18	41.87
Os06t0549600-01	Rice	extracellular	41.43	41.83
TraesCS7A01G354000.1	Wheat	vacuole	40.68	41.78
TraesCS7D01G368700.1	Wheat	unclear	40.68	41.78
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	42.37	41.74
TraesCS7A01G353900.1	Wheat	vacuole	40.68	41.62
KXG20147	Sorghum	vacuole	42.0	41.6
Os06t0548200-01	Rice	extracellular	41.81	41.57
TraesCS4B01G222500.1	Wheat	plasma membrane	44.26	41.52
HORVU2Hr1G000540.1	Barley	golgi, vacuole	42.37	41.44
EER89910	Sorghum	vacuole	41.24	41.4
EER89908	Sorghum	plasma membrane, vacuole	42.0	41.37
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	41.81	41.26
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	39.92	41.25
Zm00001d046318_P001	Maize	vacuole	41.24	41.24
TraesCS7B01G273600.1	Wheat	vacuole	40.11	41.2
TraesCS4D01G223000.1	Wheat	plasma membrane	43.88	41.17
Zm00001d037008_P001	Maize	golgi, vacuole	39.55	41.1
TraesCS2B01G017300.1	Wheat	plastid	31.64	41.08
TraesCS4A01G081300.1	Wheat	unclear	43.69	41.06
TraesCS2A01G051500.1	Wheat	peroxisome	26.37	41.06
TraesCS7A01G126600.1	Wheat	vacuole	40.11	40.96
TraesCS2A01G052800.1	Wheat	plastid, vacuole	40.49	40.95
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	40.87	40.94
TraesCS2B01G066800.1	Wheat	vacuole	40.68	40.91
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.68	40.91
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	39.74	40.89
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	43.13	40.82
HORVU7Hr1G089160.3	Barley	vacuole	40.3	40.76
TraesCS5A01G261400.1	Wheat	vacuole	40.3	40.76
TraesCS5D01G268800.1	Wheat	vacuole	40.3	40.76
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	40.11	40.73
TraesCS7B01G273500.1	Wheat	plastid	41.62	40.7
TraesCSU01G034600.1	Wheat	vacuole	39.17	40.39
Os02t0235900-01	Rice	plasma membrane, vacuole	43.13	40.39
KXG26140	Sorghum	plasma membrane	40.68	40.37
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.92	40.3
KXG20949	Sorghum	vacuole	41.05	40.3
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	44.07	40.28
Zm00001d037005_P001	Maize	vacuole	39.74	40.27
TraesCS2A01G052600.1	Wheat	vacuole	40.3	40.23
EER89907	Sorghum	plasma membrane, vacuole	39.74	40.11
Zm00001d046319_P001	Maize	vacuole	39.74	40.11
Os06t0548800-01	Rice	extracellular	40.11	40.11
TraesCS4B01G391900.1	Wheat	vacuole	38.61	40.04
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.74	40.04
HORVU2Hr1G122590.1	Barley	vacuole	40.3	40.0
TraesCS2A01G052900.1	Wheat	unclear	39.74	39.96
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	39.74	39.96
Os06t0549300-00	Rice	extracellular	39.36	39.96
HORVU2Hr1G008300.1	Barley	plastid	39.55	39.92
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.74	39.81
Os06t0549900-01	Rice	extracellular	39.55	39.77
TraesCS4B01G358600.1	Wheat	golgi	39.17	39.77
Zm00001d016199_P001	Maize	mitochondrion	42.0	39.75
TraesCS2D01G006000.1	Wheat	plastid	37.85	39.72
TraesCS5B01G302700.1	Wheat	vacuole	38.79	39.62
KXG28418	Sorghum	vacuole	39.36	39.58
Os06t0549633-00	Rice	vacuole	39.36	39.58
Zm00001d049169_P001	Maize	vacuole	39.36	39.58
TraesCS2B01G016900.1	Wheat	vacuole	38.61	39.58
TraesCS3A01G111600.1	Wheat	vacuole	39.55	39.55
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.0	39.47
TraesCS2D01G052300.1	Wheat	plastid	39.17	39.47
TraesCS2D01G052700.1	Wheat	unclear	39.17	39.39
TraesCS4A01G212100.1	Wheat	vacuole	40.11	39.3
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.98	39.28
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	38.61	39.27
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.23	39.27
TraesCS7B01G273900.1	Wheat	vacuole	38.42	39.23
HORVU4Hr1G017270.1	Barley	vacuole	40.11	39.23
TraesCS2B01G066400.1	Wheat	plastid	38.98	39.2
TraesCS5D01G309100.1	Wheat	vacuole	38.42	39.16
TraesCS7B01G273800.1	Wheat	plasma membrane	38.42	39.16
TraesCS7A01G353800.1	Wheat	vacuole	38.23	39.04
EES13185	Sorghum	vacuole	40.11	39.01
TraesCS2A01G542600.1	Wheat	vacuole	38.98	38.98
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	38.23	38.89
TraesCS7D01G472000.1	Wheat	vacuole	38.23	38.89
TraesCS4D01G101000.1	Wheat	golgi	39.74	38.86
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	38.04	38.85
TraesCS4B01G104000.1	Wheat	vacuole	39.74	38.79
TraesCS2B01G572400.1	Wheat	unclear	38.61	38.68
HORVU7Hr1G089190.1	Barley	vacuole	38.23	38.67
TraesCS3B01G070000.1	Wheat	mitochondrion	20.53	38.65
TraesCS7D01G393900.1	Wheat	vacuole	38.04	38.62
KXG29886	Sorghum	mitochondrion	42.18	38.55
TraesCS7A01G400100.1	Wheat	unclear	38.04	38.48
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.55	38.46
TraesCS2D01G052400.1	Wheat	vacuole	28.81	38.06
TraesCS2A01G005700.1	Wheat	vacuole	35.4	37.98
HORVU2Hr1G008310.1	Barley	golgi, vacuole	38.79	37.94
HORVU7Hr1G093940.1	Barley	vacuole	37.66	37.74
TraesCS2B01G145300.1	Wheat	plasma membrane	40.3	37.41
Solyc04g080400.1.1	Tomato	extracellular	39.74	37.41
Os11t0495950-00	Rice	plasma membrane, vacuole	38.04	37.41
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.49	37.39
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	40.3	37.35
KXG29885	Sorghum	plastid	35.22	37.33
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.3	36.96
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.3	36.83
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	30.32	36.76
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.92	36.61
TraesCS2B01G145500.1	Wheat	vacuole	39.92	36.43
TraesCS2D01G543700.1	Wheat	unclear	38.23	36.19
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	15.63	34.73
Zm00001d037009_P001	Maize	plasma membrane	38.23	34.64
HORVU7Hr1G089210.1	Barley	mitochondrion	39.55	34.2
HORVU7Hr1G026630.1	Barley	plastid	30.32	31.76
HORVU7Hr1G089260.1	Barley	mitochondrion	28.63	31.28

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:K4B7Y9	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc02g070070.1	EnsemblPlants:Solyc02g070070.1.1	TMHMM:TMhelix	UniParc:UPI000276848C	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:39904988..39906583

Molecular Weight (calculated)

59463.6 Da

IEP (calculated)

7.202

GRAVY (calculated)

-0.107

Length

531 amino acids

Sequence
(BLAST)

001: MASSNCIVIT LILILLWSSS SVLSDTTIPE KFYQCICKNS DFSDPFSSAF YTPNDASFNT ILNSTAQNLR CLMPSVPKPD LIFTPITEPH VQASVICAKK
101: LNLQLRVRSG GHDYEGISYI SEMGFPFVIV DLLKLRGIDV NTEENSAWAQ AGATVGEVYY RISEKSKTLG FPAGLCTSLG IGGHITGGAY GSMMRKFGLG
201: VDNVIDARIV NANGTILDRQ SMGEDLFWAI RGGGGASFGI ILSWKMKLVT VPSVVTVFTV SKTLEDGATK VLYKWQQVAD KIDDRLFMRV VINVVDKKQA
301: KGERTVQTAY NSLFLGNGET LLRITNESFP ELGLTQKDVT EMSWIESILY IVGYANNTPP EVLLQGKPQF KNYFKAKSDF VKVPIPETGL EGLWELLLEE
401: DSPLMIWNPY GGMMANISES DTPFPHRKGV IFKIQYLTLW NQPNEELATK HVHWMRKLYN YMTSYASMYP REAYVNYRDL DLGMNGNSSF AQASVWGNKY
501: FKNNFHRLVQ IKTVVDPENF FKHEQSIPVK G

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.