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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH58398 Soybean plasma membrane, vacuole 96.39 95.67
KRH42274 Soybean mitochondrion, nucleus 80.65 81.26
KRH36839 Soybean nucleus 82.73 80.29
KRH11824 Soybean nucleus 81.21 78.82
KRH58399 Soybean nucleus 71.16 70.22
CDY43653 Canola golgi 39.85 68.85
CDY70228 Canola cytosol, golgi, peroxisome 39.85 68.18
VIT_10s0003g05420.t01 Wine grape vacuole 69.07 67.53
CDX77568 Canola endoplasmic reticulum, plasma membrane 66.98 66.1
CDY70679 Canola cytosol, mitochondrion, peroxisome 29.22 66.09
Bra023131.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 66.79 65.92
CDY02326 Canola endoplasmic reticulum, plasma membrane, vacuole 66.79 65.92
PGSC0003DMT400054393 Potato plasma membrane, vacuole 66.79 65.92
Bra014890.1-P Field mustard plasma membrane 66.6 65.73
CDY67309 Canola endoplasmic reticulum, plasma membrane 66.6 65.73
Solyc02g070070.1.1 Tomato extracellular 65.28 64.78
Solyc09g072660.2.1 Tomato extracellular 67.36 64.66
PGSC0003DMT400062414 Potato plasma membrane, vacuole 67.55 64.26
Bra005392.1-P Field mustard plasma membrane 64.71 64.1
AT2G34790.1 Thale cress golgi, vacuole 64.52 63.91
AT1G30760.2 Thale cress golgi 66.79 63.77
CDY31642 Canola plasma membrane 61.48 63.65
CDX84280 Canola plasma membrane 61.1 63.26
KRH42276 Soybean nucleus 70.97 63.07
Bra021930.1-P Field mustard plasma membrane 59.2 62.15
Solyc02g069690.1.1 Tomato golgi, vacuole 63.76 61.43
PGSC0003DMT400089776 Potato golgi, vacuole 63.19 60.88
KRH42266 Soybean vacuole 54.84 53.62
KRG99206 Soybean extracellular, peroxisome 40.61 52.97
KRH58388 Soybean vacuole 53.89 51.92
KRH36852 Soybean plastid 43.64 51.92
KRH42268 Soybean vacuole 51.42 51.23
KRH58389 Soybean nucleus 51.99 51.12
KRH58387 Soybean plastid, vacuole 52.94 50.82
KRH56394 Soybean vacuole 50.66 50.66
KRH58344 Soybean vacuole 50.66 50.38
KRH58391 Soybean vacuole 50.66 50.38
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 42.69 50.22
KRH62528 Soybean endoplasmic reticulum, golgi, vacuole 50.28 50.19
KRH41927 Soybean nucleus 50.28 50.0
KRH42808 Soybean extracellular, vacuole 50.47 49.72
KRH42267 Soybean vacuole 49.72 49.72
KRH42269 Soybean vacuole 49.91 49.53
KRH56395 Soybean nucleus 49.72 49.53
TraesCS7A01G354100.1 Wheat vacuole 40.8 49.43
KRH11844 Soybean vacuole 50.66 49.35
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 48.2 49.03
KRH11845 Soybean vacuole 49.34 48.6
TraesCS1D01G443200.1 Wheat cytosol 28.84 48.1
KRH36853 Soybean vacuole 48.96 48.04
TraesCS7B01G026000.1 Wheat cytosol 30.17 47.89
KRH36766 Soybean vacuole 48.39 47.84
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 37.57 47.71
KRH11827 Soybean vacuole 48.39 47.49
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 19.54 47.03
KRH36843 Soybean vacuole 47.44 46.9
TraesCS7A01G354000.1 Wheat vacuole 45.92 46.81
KRH11826 Soybean nucleus 48.2 46.69
TraesCS7D01G368700.1 Wheat unclear 45.73 46.62
KRH36840 Soybean nucleus 48.39 46.53
TraesCS2B01G172300.1 Wheat vacuole 46.68 46.5
TraesCS7B01G273600.1 Wheat vacuole 45.54 46.42
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 45.73 46.35
KRH11841 Soybean vacuole 48.96 46.15
KRH36842 Soybean vacuole 46.68 46.15
KXG20146 Sorghum extracellular 46.68 46.15
HORVU7Hr1G089270.1 Barley vacuole 46.49 46.05
TraesCS7B01G273500.1 Wheat plastid 47.44 46.04
TraesCS1B01G456900.1 Wheat vacuole 43.45 45.98
KRH41928 Soybean vacuole 46.3 45.95
HORVU1Hr1G092680.1 Barley golgi, vacuole 46.68 45.9
TraesCS1D01G338700.1 Wheat plasma membrane 46.68 45.9
KRH36841 Soybean vacuole 34.16 45.8
KRH49946 Soybean extracellular, vacuole 36.81 45.75
KRH42271 Soybean endoplasmic reticulum 50.09 45.75
HORVU7Hr1G089160.3 Barley vacuole 45.54 45.71
KXG20147 Sorghum vacuole 46.49 45.71
KRH36851 Soybean vacuole 48.96 45.66
Os06t0549600-01 Rice extracellular 45.54 45.63
Zm00001d037005_P001 Maize vacuole 45.35 45.61
Zm00001d046322_P001 Maize extracellular 45.92 45.57
EER89910 Sorghum vacuole 45.73 45.56
TraesCS2D01G151500.1 Wheat vacuole 45.73 45.56
KRH58395 Soybean endoplasmic reticulum 50.28 45.53
TraesCS7A01G353700.1 Wheat extracellular, vacuole 45.92 45.49
TraesCS7A01G353900.1 Wheat vacuole 44.78 45.47
TraesCS7A01G126600.1 Wheat vacuole 44.78 45.38
TraesCS7D01G368800.1 Wheat vacuole 44.78 45.38
TraesCS7D01G369200.1 Wheat extracellular, vacuole 45.54 45.37
TraesCS1B01G469800.1 Wheat vacuole 46.3 45.35
Os06t0548200-01 Rice extracellular 45.92 45.32
TraesCS7B01G273700.1 Wheat vacuole 44.59 45.19
TraesCS1D01G433600.1 Wheat vacuole 46.3 45.19
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 45.92 45.07
HORVU2Hr1G008270.1 Barley peroxisome 26.57 45.02
TraesCS4B01G391900.1 Wheat vacuole 43.64 44.92
Zm00001d046318_P001 Maize vacuole 45.16 44.82
TraesCS1A01G424100.1 Wheat vacuole 43.26 44.71
Os06t0549900-01 Rice extracellular 44.78 44.7
EER89909 Sorghum extracellular, plasma membrane, vacuole 44.59 44.68
TraesCS5A01G261400.1 Wheat vacuole 44.4 44.57
TraesCS5D01G268800.1 Wheat vacuole 44.4 44.57
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 44.78 44.53
KRH42272 Soybean vacuole 45.54 44.53
KRH11830 Soybean vacuole 41.56 44.51
Os06t0548100-00 Rice golgi 45.16 44.49
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 45.35 44.42
TraesCS2B01G066900.1 Wheat nucleus, unclear 44.4 44.4
Zm00001d049169_P001 Maize vacuole 44.4 44.32
TraesCS2A01G051500.1 Wheat peroxisome 28.65 44.28
KRH11825 Soybean vacuole 43.83 44.25
TraesCS2A01G052800.1 Wheat plastid, vacuole 44.02 44.19
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 43.26 44.19
KXG28418 Sorghum vacuole 44.21 44.13
TraesCS2B01G066800.1 Wheat vacuole 44.21 44.13
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 44.21 44.13
HORVU2Hr1G122590.1 Barley vacuole 44.78 44.11
TraesCSU01G034600.1 Wheat vacuole 43.07 44.08
KRH71761 Soybean mitochondrion, plastid, vacuole 35.48 44.0
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 43.64 43.98
TraesCS2A01G052600.1 Wheat vacuole 44.21 43.8
TraesCS2D01G052700.1 Wheat unclear 43.83 43.75
HORVU2Hr1G008300.1 Barley plastid 43.64 43.73
KRH12123 Soybean plastid 37.95 43.67
TraesCS3B01G070000.1 Wheat mitochondrion 23.34 43.62
Os06t0549300-00 Rice extracellular 43.26 43.59
TraesCS2A01G052900.1 Wheat unclear 43.64 43.56
TraesCS2B01G017300.1 Wheat plastid 33.78 43.52
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 42.69 43.52
TraesCS5B01G302700.1 Wheat vacuole 42.88 43.46
EER89908 Sorghum plasma membrane, vacuole 44.4 43.41
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 42.31 43.39
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 46.49 43.36
TraesCS2A01G542600.1 Wheat vacuole 43.64 43.31
TraesCS2B01G572400.1 Wheat unclear 43.45 43.21
TraesCS5D01G309100.1 Wheat vacuole 42.69 43.19
TraesCS7B01G273800.1 Wheat plasma membrane 42.5 42.99
Os06t0549633-00 Rice vacuole 43.07 42.99
HORVU2Hr1G000540.1 Barley golgi, vacuole 44.21 42.91
TraesCS2D01G052300.1 Wheat plastid 42.88 42.88
Zm00001d037008_P001 Maize golgi, vacuole 41.56 42.86
TraesCS4B01G358600.1 Wheat golgi 42.5 42.83
KXG26140 Sorghum plasma membrane 43.45 42.8
EER89907 Sorghum plasma membrane, vacuole 42.69 42.78
Zm00001d046319_P001 Maize vacuole 42.69 42.78
TraesCS2D01G006000.1 Wheat plastid 40.99 42.69
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 42.88 42.64
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 42.69 42.61
HORVU4Hr1G017270.1 Barley vacuole 43.83 42.54
TraesCS7D01G393900.1 Wheat vacuole 42.13 42.45
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 41.94 42.34
KXG20949 Sorghum vacuole 43.45 42.33
HORVU2Hr1G013930.1 Barley golgi, vacuole 43.83 42.31
TraesCS4B01G104000.1 Wheat vacuole 43.64 42.28
TraesCS3A01G111600.1 Wheat vacuole 42.5 42.18
TraesCS7D01G472000.1 Wheat vacuole 41.75 42.15
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 42.13 42.13
TraesCS7A01G353800.1 Wheat vacuole 41.56 42.12
TraesCS7D01G369000.1 Wheat extracellular, vacuole 41.56 42.12
TraesCS4A01G212100.1 Wheat vacuole 43.26 42.07
TraesCS2B01G066400.1 Wheat plastid 42.13 42.05
TraesCS4D01G101000.1 Wheat golgi 43.26 41.99
TraesCS2B01G145300.1 Wheat plasma membrane 45.54 41.96
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 41.56 41.95
TraesCS7A01G400100.1 Wheat unclear 41.75 41.9
Os06t0548800-01 Rice extracellular 42.13 41.81
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 45.54 41.74
TraesCS7B01G273900.1 Wheat vacuole 41.18 41.73
HORVU7Hr1G089190.1 Barley vacuole 41.56 41.71
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 45.35 41.71
HORVU7Hr1G093940.1 Barley vacuole 41.94 41.7
EES13185 Sorghum vacuole 43.07 41.58
TraesCS2D01G052400.1 Wheat vacuole 31.69 41.54
HORVU2Hr1G008310.1 Barley golgi, vacuole 42.69 41.44
TraesCS2B01G016900.1 Wheat vacuole 40.42 41.12
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 44.97 40.93
TraesCS2D01G543700.1 Wheat unclear 43.26 40.64
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 18.41 40.59
Os11t0495950-00 Rice plasma membrane, vacuole 41.37 40.37
TraesCS4B01G222500.1 Wheat plasma membrane 43.07 40.11
TraesCS2A01G005700.1 Wheat vacuole 37.57 40.0
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 44.02 39.93
TraesCS2D01G126400.1 Wheat golgi, vacuole 43.83 39.9
TraesCS2B01G145500.1 Wheat vacuole 44.02 39.86
Os02t0235900-01 Rice plasma membrane, vacuole 42.88 39.86
TraesCS4D01G223000.1 Wheat plasma membrane 42.69 39.75
Zm00001d016199_P001 Maize mitochondrion 42.31 39.75
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 32.83 39.5
TraesCS4A01G081300.1 Wheat unclear 42.31 39.47
Zm00001d037009_P001 Maize plasma membrane 43.64 39.25
KXG29886 Sorghum mitochondrion 43.07 39.07
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 42.69 38.73
KXG29885 Sorghum plastid 36.05 37.92
KRH34335 Soybean vacuole 39.47 37.82
KRG92465 Soybean golgi, vacuole 39.28 37.64
HORVU7Hr1G089210.1 Barley mitochondrion 42.88 36.81
HORVU7Hr1G026630.1 Barley plastid 32.64 33.92
HORVU7Hr1G089260.1 Barley mitochondrion 31.12 33.74
Protein Annotations
EntrezGene:100813706Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1EMBL:ACUP02004795
InterPro:BBEInterPro:FAD-bd_2InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1EnsemblPlantsGene:GLYMA_08G080600GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0016614GO:GO:0050660GO:GO:0055114GO:GO:0071949UniProt:I1KRB5InterPro:IPR016166
InterPro:IPR016167EnsemblPlants:KRH42273ProteinID:KRH42273ProteinID:KRH42273.1InterPro:Oxid_FAD_bind_NPFAM:PF01565
PFAM:PF08031PFscan:PS51387PANTHER:PTHR32448PANTHER:PTHR32448:SF35SUPFAM:SSF56176SignalP:SignalP-noTM
UniParc:UPI00023C6039SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:6114930..6117078
Molecular Weight (calculated)
58865.7 Da
IEP (calculated)
9.000
GRAVY (calculated)
-0.113
Length
527 amino acids
Sequence
(BLAST)
001: MVSPISLIVL LLSVSLADSA SVQESFVQCL NLNSDKTFPF YSSIYTASNP SFTSILDSSA QNLRLLVPSV PKPEFIFTPS RDSHVQAAVI CSKKLGIHIR
101: VRSGGHDYEG ISYVSEIESP FIVVDLVKLR GIDVDVKSNT AWVQAGATTG EVYYRIYEKS SVHGFPAGLC TSLGIGGHIT GGAYGAMMRK YGLGVDNVLD
201: AKIVDANGRI LDREAMGEDL FWAIRGGGGG SFGILLWWKI KLVSVPPTVT VFTVTKTLEQ GATKILHKWQ EVAPYIDENL FIRVIIQPSS DARNKTQRTI
301: ATSYNALFLG GARTLLQVMK TSFPELGLTI KDCLETSWIK SVLYIAGFPS DTPPEVLLKG KSTFKNFFKA KSDFVREPIP ETGLEGLWQR LLVEDSPLMI
401: WNPYGGRMSQ FSESETPFPH RNGTLYKIQY LSLWQEGDKN AAKHIDWIRK LYNYMGPYVS SLPREAYVNY RDLDLGINTK NSTSYIQASA WGYRYYKNNF
501: DRLVKIKTKV DPENVFRHEQ SIPPLPL
Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)
001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE
Arabidopsis Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.