CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 6
plasma membrane 6
golgi 5
plastid 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11826	Soybean	nucleus	91.61	92.28
KRH36766	Soybean	vacuole	79.38	81.61
KRH36842	Soybean	vacuole	78.83	81.05
KRH11830	Soybean	vacuole	70.26	78.25
KRH36843	Soybean	vacuole	73.36	75.42
KRH11827	Soybean	vacuole	67.88	69.27
KRH58395	Soybean	endoplasmic reticulum	72.81	68.56
KRH42271	Soybean	endoplasmic reticulum	72.08	68.46
KRH42272	Soybean	vacuole	64.6	65.68
Bra038798.1-P	Field mustard	vacuole	62.77	63.82
CDX98676	Canola	vacuole	62.59	63.64
AT4G20840.1	Thale cress	plasma membrane	62.41	63.45
Bra020915.1-P	Field mustard	vacuole	60.95	62.9
CDY31432	Canola	vacuole	60.95	62.9
CDX94009	Canola	vacuole	61.86	62.89
KRH36841	Soybean	vacuole	45.07	62.85
CDX76449	Canola	vacuole	60.77	62.59
CDY49803	Canola	vacuole	60.4	62.45
Bra019831.1-P	Field mustard	plasma membrane, vacuole	60.4	62.34
CDX97984	Canola	plasma membrane, vacuole	60.4	62.34
AT1G11770.1	Thale cress	vacuole	60.77	62.13
Bra038799.1-P	Field mustard	golgi	60.58	62.06
CDX94008	Canola	golgi	60.58	62.06
CDX98675	Canola	golgi	60.4	61.87
KRH36852	Soybean	plastid	49.45	61.17
VIT_03s0017g01470.t01	Wine grape	vacuole	34.85	61.02
AT1G01980.1	Thale cress	plasma membrane, vacuole	59.31	60.07
CDY34627	Canola	vacuole	58.58	60.0
CDY34829	Canola	vacuole	58.21	59.29
Bra013476.1-P	Field mustard	cytosol, plastid	58.21	59.18
Bra031780.1-P	Field mustard	vacuole	58.03	59.11
CDX67534	Canola	plasma membrane, vacuole	57.85	59.03
AT4G20830.1	Thale cress	vacuole	61.31	58.95
VIT_03s0017g01490.t01	Wine grape	vacuole	58.39	58.72
Bra028530.1-P	Field mustard	plasma membrane, vacuole	57.48	58.66
CDY13353	Canola	plasma membrane	57.48	58.66
KRH11845	Soybean	vacuole	56.75	58.13
KRH36853	Soybean	vacuole	56.93	58.1
Solyc02g022850.1.1	Tomato	vacuole	57.12	57.86
KRH11844	Soybean	vacuole	56.93	57.67
CDX82782	Canola	vacuole	59.85	57.54
PGSC0003DMT400046308	Potato	extracellular	56.93	57.35
CDX79008	Canola	vacuole	59.12	57.04
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	57.3	56.88
VIT_10s0003g05450.t01	Wine grape	extracellular	59.49	56.79
CDY09546	Canola	extracellular, vacuole	54.01	55.22
AT1G30740.2	Thale cress	vacuole	53.65	54.85
CDY02321	Canola	extracellular, vacuole	53.47	54.66
KRH11841	Soybean	vacuole	54.93	53.85
KRH36851	Soybean	vacuole	54.2	52.57
KRH42269	Soybean	vacuole	50.73	52.35
KRH42808	Soybean	extracellular, vacuole	50.73	51.96
KRH42266	Soybean	vacuole	50.18	51.02
KRH41927	Soybean	nucleus	48.72	50.38
KRH71761	Soybean	mitochondrion, plastid, vacuole	39.05	50.35
KRH12123	Soybean	plastid	41.61	49.78
KRH58389	Soybean	nucleus	48.36	49.44
KRH42267	Soybean	vacuole	47.45	49.34
KRH58399	Soybean	nucleus	47.99	49.25
KRH58391	Soybean	vacuole	47.08	48.68
KRH41928	Soybean	vacuole	47.08	48.59
KRH58398	Soybean	plasma membrane, vacuole	47.08	48.59
KRH42268	Soybean	vacuole	46.9	48.58
KRH42273	Soybean	nucleus	46.53	48.39
KRH58388	Soybean	vacuole	47.81	47.9
KRH36839	Soybean	nucleus	47.26	47.7
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	38.87	47.54
KRH58344	Soybean	vacuole	45.26	46.79
KRH11824	Soybean	nucleus	46.35	46.78
KRH42274	Soybean	mitochondrion, nucleus	44.53	46.65
KRH58387	Soybean	plastid, vacuole	46.72	46.63
KRH49946	Soybean	extracellular, vacuole	35.4	45.75
TraesCS2B01G017300.1	Wheat	plastid	33.94	45.48
KRH56394	Soybean	vacuole	43.61	45.35
Zm00001d046318_P001	Maize	vacuole	43.8	45.2
TraesCS7A01G354100.1	Wheat	vacuole	35.77	45.06
EER89910	Sorghum	vacuole	43.43	44.99
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	43.07	44.7
TraesCS1D01G443200.1	Wheat	cytosol	25.73	44.62
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.15	44.59
Os06t0549900-01	Rice	extracellular	42.88	44.51
TraesCS7B01G273700.1	Wheat	vacuole	42.15	44.42
TraesCS5A01G261400.1	Wheat	vacuole	42.52	44.38
HORVU2Hr1G008270.1	Barley	peroxisome	25.18	44.37
KRH56395	Soybean	nucleus	42.7	44.23
TraesCS5D01G268800.1	Wheat	vacuole	42.34	44.19
Zm00001d037005_P001	Maize	vacuole	42.15	44.08
TraesCS2A01G051500.1	Wheat	peroxisome	27.37	43.99
TraesCS2D01G151500.1	Wheat	vacuole	42.34	43.86
TraesCS7D01G368800.1	Wheat	vacuole	41.61	43.85
KRH42276	Soybean	nucleus	47.45	43.84
TraesCS7B01G273500.1	Wheat	plastid	43.43	43.83
TraesCS7A01G353900.1	Wheat	vacuole	41.42	43.74
TraesCS2B01G172300.1	Wheat	vacuole	42.15	43.67
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.7	43.58
TraesCS5D01G309100.1	Wheat	vacuole	41.42	43.57
EER89909	Sorghum	extracellular, plasma membrane, vacuole	41.79	43.54
TraesCS7A01G354000.1	Wheat	vacuole	41.06	43.52
TraesCS1B01G469800.1	Wheat	vacuole	42.7	43.49
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.24	43.46
TraesCS7B01G273600.1	Wheat	vacuole	40.88	43.33
TraesCS1D01G338700.1	Wheat	plasma membrane	42.34	43.28
TraesCS2B01G016900.1	Wheat	vacuole	40.88	43.24
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.97	43.23
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.24	43.21
TraesCS4B01G358600.1	Wheat	golgi	41.24	43.21
TraesCS4B01G391900.1	Wheat	vacuole	40.33	43.16
HORVU2Hr1G008300.1	Barley	plastid	41.42	43.16
TraesCS7D01G368700.1	Wheat	unclear	40.69	43.13
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	40.51	43.02
TraesCS1B01G456900.1	Wheat	vacuole	39.05	42.97
EER89907	Sorghum	plasma membrane, vacuole	41.24	42.97
TraesCS1A01G424100.1	Wheat	vacuole	39.96	42.94
TraesCS2D01G006000.1	Wheat	plastid	39.6	42.89
TraesCS7A01G126600.1	Wheat	vacuole	40.69	42.88
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.42	42.83
TraesCS7B01G026000.1	Wheat	cytosol	25.91	42.77
KRH11825	Soybean	vacuole	40.69	42.72
TraesCS2D01G052300.1	Wheat	plastid	41.06	42.69
TraesCS5B01G302700.1	Wheat	vacuole	40.51	42.69
TraesCS1D01G433600.1	Wheat	vacuole	41.97	42.59
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	40.15	42.55
HORVU7Hr1G089160.3	Barley	vacuole	40.69	42.48
TraesCS2B01G066400.1	Wheat	plastid	40.88	42.42
KXG20146	Sorghum	extracellular	41.24	42.4
Zm00001d046319_P001	Maize	vacuole	40.69	42.4
Zm00001d046322_P001	Maize	extracellular	41.06	42.37
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	40.88	42.34
TraesCSU01G034600.1	Wheat	vacuole	39.78	42.33
Os06t0548100-00	Rice	golgi	41.24	42.24
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.24	42.16
HORVU7Hr1G089270.1	Barley	vacuole	40.88	42.11
HORVU2Hr1G000540.1	Barley	golgi, vacuole	41.61	41.99
TraesCS2A01G052600.1	Wheat	vacuole	40.69	41.92
TraesCS7A01G400100.1	Wheat	unclear	40.15	41.9
TraesCS7D01G393900.1	Wheat	vacuole	39.96	41.87
HORVU2Hr1G122590.1	Barley	vacuole	40.88	41.87
Os06t0549600-01	Rice	extracellular	40.15	41.83
TraesCS2B01G066900.1	Wheat	nucleus, unclear	40.15	41.75
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	31.57	41.69
TraesCS2A01G052900.1	Wheat	unclear	40.15	41.67
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	40.88	41.64
TraesCS4D01G101000.1	Wheat	golgi	41.24	41.62
TraesCS2A01G542600.1	Wheat	vacuole	40.33	41.62
TraesCS2A01G005700.1	Wheat	vacuole	37.59	41.62
EES13185	Sorghum	vacuole	41.42	41.58
Os06t0548200-01	Rice	extracellular	40.51	41.57
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.42	41.54
TraesCS4A01G212100.1	Wheat	vacuole	41.06	41.51
TraesCS2B01G066800.1	Wheat	vacuole	39.96	41.48
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.42	41.38
HORVU7Hr1G089190.1	Barley	vacuole	39.6	41.33
TraesCS2B01G572400.1	Wheat	unclear	39.96	41.32
Os06t0549300-00	Rice	extracellular	39.42	41.3
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.88	41.25
KXG20949	Sorghum	vacuole	40.69	41.22
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.23	41.19
EER89908	Sorghum	plasma membrane, vacuole	40.51	41.19
TraesCS2D01G052700.1	Wheat	unclear	39.6	41.1
Zm00001d037008_P001	Maize	golgi, vacuole	38.32	41.1
TraesCS7B01G273800.1	Wheat	plasma membrane	39.05	41.07
HORVU4Hr1G017270.1	Barley	vacuole	40.69	41.07
KXG20147	Sorghum	vacuole	40.15	41.04
TraesCS4B01G104000.1	Wheat	vacuole	40.69	40.99
TraesCS7A01G353800.1	Wheat	vacuole	38.87	40.96
TraesCS7B01G273900.1	Wheat	vacuole	38.87	40.96
HORVU7Hr1G093940.1	Barley	vacuole	39.6	40.94
Os06t0549633-00	Rice	vacuole	39.42	40.91
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.23	40.72
TraesCS7D01G472000.1	Wheat	vacuole	38.69	40.61
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.87	40.57
Os06t0548800-01	Rice	extracellular	39.05	40.3
HORVU2Hr1G013930.1	Barley	golgi, vacuole	40.15	40.29
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	16.06	40.18
TraesCS2B01G145300.1	Wheat	plasma membrane	41.79	40.03
KXG26140	Sorghum	plasma membrane	39.05	40.0
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.06	39.82
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.32	39.77
TraesCS2D01G052400.1	Wheat	vacuole	29.01	39.55
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.57	39.5
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	41.42	39.48
TraesCS4A01G081300.1	Wheat	unclear	40.69	39.47
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.14	39.43
TraesCS3A01G111600.1	Wheat	vacuole	38.14	39.36
TraesCS4B01G222500.1	Wheat	plasma membrane	40.51	39.22
KXG28418	Sorghum	vacuole	37.77	39.2
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.24	39.03
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	37.41	38.9
TraesCS4D01G223000.1	Wheat	plasma membrane	40.15	38.87
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	40.51	38.74
Os11t0495950-00	Rice	plasma membrane, vacuole	38.14	38.7
Zm00001d049169_P001	Maize	vacuole	37.23	38.64
TraesCS2D01G543700.1	Wheat	unclear	39.42	38.5
Os02t0235900-01	Rice	plasma membrane, vacuole	39.78	38.45
Zm00001d016199_P001	Maize	mitochondrion	38.87	37.97
TraesCS3B01G070000.1	Wheat	mitochondrion	19.53	37.94
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.15	37.87
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.96	37.82
KRG92465	Soybean	golgi, vacuole	37.77	37.64
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	35.04	37.35
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	39.6	37.35
KRH34335	Soybean	vacuole	37.41	37.27
KRG99206	Soybean	extracellular, peroxisome	27.37	37.13
TraesCS2B01G145500.1	Wheat	vacuole	39.42	37.11
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	15.88	36.4
HORVU7Hr1G089210.1	Barley	mitochondrion	40.69	36.32
KXG29886	Sorghum	mitochondrion	38.5	36.32
Zm00001d037009_P001	Maize	plasma membrane	37.04	34.64
KXG29885	Sorghum	plastid	31.2	34.13
HORVU7Hr1G089260.1	Barley	mitochondrion	29.56	33.33
HORVU7Hr1G026630.1	Barley	plastid	29.56	31.95

Protein Annotations

EntrezGene:100788233	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EMBL:ACUP02005398
InterPro:BBE	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	EnsemblPlantsGene:GLYMA_09G027000	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:I1L0H7	InterPro:IPR016166
InterPro:IPR016167	EnsemblPlants:KRH36840	ProteinID:KRH36840	ProteinID:KRH36840.1	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF34	SUPFAM:SSF56176	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000233C1B8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2203821..2205916

Molecular Weight (calculated)

60953.4 Da

IEP (calculated)

10.087

GRAVY (calculated)

-0.127

Length

548 amino acids

Sequence
(BLAST)

001: MATKPRLAYL PAIFVLLLVV FTSVTAQSPG PESSSLHDTF LQCLTKYTKN SSSQLSNIVF ANTNPKFPTV LQNYIRNARF NTSSTPKPSL IVTPQKESHV
101: QATVICAKSV NIQLKIRSGG HDYEGISYIS DEPFIILDMF NFRRITVDIK NEVAVVQAGA TLGEVYYRIW KKSKVHGFPA GVCPTVGVGG HFSGGGYGNM
201: LRKYGLSVDN VIDAQIVDVK GNLLNRKTMG EDLFWAIRGG GGASFGVILS YTIKLVPVPE TVTVFRVEKT LETNVTATDL VVQWQKVAPN TDDRLFMRLL
301: LQPVSSKVVK GTITVRASVV ALFLGGANEV VSILAKQFSL LGLKKENCTE VSWINSVLWW NDNNSLKNGV KPEALLDRNL NSAGFLKRKS DYVQNAISRD
401: GLEWLFKRMI ELGKTGLVFN PYGGKMSEIP SDATPFPHRK GNLYKIQYSV NWDDRSPGAA LNFTNQAKRL FSYMTPFVSK NPRSAFLNYR DLDIGVNSFG
501: ENSFQEGVVY GTKYFNDNFQ RLVKIKTIVD PENFFRNEQS IPVLRGKA

Best Arabidopsis Sequence Match ( AT4G20840.1 )
(BLAST)

001: MIATQTFVSV FFFVFFLVSL PFFSSAAPPS SDSIYESFVQ CFSDKTKSPQ AQITDNVFSR TNPSFSSVLR AYIRNGRFNT SSTPKPAIIV TPRSDIHVSA
101: AVTCSKSLNF LLKIRSGGHD YEGLSYISDK PFFILDMSNL RDVSVDIADQ SAWISAGATL GEVYYRIWEK SKVHGFPAGV CPTVGVGGHI SGGGYGNMLR
201: KFGLSVDNLI DAKIVDVNGQ ILDRKSMGED LFWAISGGGG ASFGVVLGYK VKLVPVPETV TVFRVEKYMD SGAVDMVHKW QSVGPKTDRN LFLRMLIQPV
301: TRKKVKTVRA TVVALFLGRA EEVVALLGKE FPELSLKKEN CSEMTWFQSA LWWDNRVNPT QIDPKVFLDR NLDRANFGKR KSDYVASEIP RDGIESLFKK
401: MTELGKIGLV FNPYGGKMAE VTVNATPFPH RSKLFKIQYS VTWQENSVEI EKGFLNQANV LYSFMTGFVS KNPRNAYLNY RDVDIGVNDH GTNSYEEGEV
501: YGRKYFGDNF DRLVKVKTAA DPDNFFRNEQ SIPTVLSKA

Arabidopsis Description

Berberine bridge enzyme-like 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.