Factsheet for VIT_10s0003g05450.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 23391302
extracellular: 26106900

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

msms PMID: 26106900 doi

C Guillier, M Gamm, G Lucchi, C Truntzer, D Pecqueur, P Ducoroy, M Adrian, MC Héloir

Clinical Innovation Proteomic Platform - CLIPP, 15 Boulevard Maréchal de Lattre de Tassigny, BP37013, F-21070 Dijon cedex, France., CNRS, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;, Université de Bourgogne, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g01490.t01	Wine grape	vacuole	68.47	72.11
VIT_03s0017g01470.t01	Wine grape	vacuole	38.15	69.97
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	65.51	68.12
KRH36842	Soybean	vacuole	55.92	60.23
VIT_10s0003g05620.t01	Wine grape	vacuole	55.57	60.08
VIT_10s0003g05550.t01	Wine grape	vacuole	55.4	59.89
VIT_10s0003g05580.t01	Wine grape	plasma membrane, vacuole	55.4	59.89
KRH36840	Soybean	nucleus	56.79	59.49
KRH11827	Soybean	vacuole	55.57	59.4
KRH36766	Soybean	vacuole	54.88	59.1
Solyc02g022850.1.1	Tomato	vacuole	55.57	58.96
KRH11826	Soybean	nucleus	55.57	58.64
Bra038798.1-P	Field mustard	vacuole	54.88	58.44
CDX98676	Canola	vacuole	54.7	58.26
PGSC0003DMT400046308	Potato	extracellular	54.88	57.9
CDX94009	Canola	vacuole	54.36	57.88
KRH36843	Soybean	vacuole	53.48	57.6
VIT_10s0003g05570.t01	Wine grape	plasma membrane, vacuole	55.57	57.27
CDY31432	Canola	vacuole	52.79	57.06
CDY49803	Canola	vacuole	52.61	56.98
KRH42272	Soybean	vacuole	53.48	56.96
Bra019831.1-P	Field mustard	plasma membrane, vacuole	52.61	56.87
Bra020915.1-P	Field mustard	vacuole	52.61	56.87
CDX97984	Canola	plasma membrane, vacuole	52.61	56.87
KRH42271	Soybean	endoplasmic reticulum	56.97	56.67
CDX76449	Canola	vacuole	52.44	56.58
KRH36841	Soybean	vacuole	38.5	56.23
Bra013476.1-P	Field mustard	cytosol, plastid	52.79	56.22
AT4G20840.1	Thale cress	plasma membrane	52.61	56.03
CDX94008	Canola	golgi	51.74	55.51
KRH58395	Soybean	endoplasmic reticulum	56.27	55.5
Bra038799.1-P	Field mustard	golgi	51.57	55.33
CDY13353	Canola	plasma membrane	51.74	55.31
KRH11830	Soybean	vacuole	47.39	55.28
VIT_10s0003g05470.t01	Wine grape	vacuole	54.36	55.22
CDX98675	Canola	golgi	51.39	55.14
AT1G01980.1	Thale cress	plasma membrane, vacuole	51.92	55.08
AT1G11770.1	Thale cress	vacuole	51.39	55.04
VIT_10s0003g04730.t01	Wine grape	plasma membrane, vacuole	51.22	54.95
Bra028530.1-P	Field mustard	plasma membrane, vacuole	51.39	54.93
CDX67534	Canola	plasma membrane, vacuole	51.39	54.93
CDX79008	Canola	vacuole	53.48	54.05
CDX82782	Canola	vacuole	53.48	53.86
Bra031780.1-P	Field mustard	vacuole	50.0	53.35
CDY34829	Canola	vacuole	50.0	53.35
CDY34627	Canola	vacuole	49.65	53.27
CDY09546	Canola	extracellular, vacuole	49.65	53.17
CDY02321	Canola	extracellular, vacuole	49.48	52.99
VIT_12s0028g01780.t01	Wine grape	plasma membrane, vacuole	49.48	52.99
AT4G20830.1	Thale cress	vacuole	52.44	52.81
AT1G30740.2	Thale cress	vacuole	48.78	52.24
VIT_12s0028g01790.t01	Wine grape	plastid	47.39	49.91
VIT_10s0003g05390.t01	Wine grape	extracellular	46.52	49.91
VIT_12s0028g01770.t01	Wine grape	plasma membrane, vacuole	48.95	49.3
VIT_10s0003g05420.t01	Wine grape	vacuole	45.82	48.79
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	36.59	46.88
TraesCS7A01G354000.1	Wheat	vacuole	40.77	45.26
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.64	44.92
Os06t0549900-01	Rice	extracellular	41.29	44.89
TraesCS7D01G368700.1	Wheat	unclear	40.07	44.49
EER89910	Sorghum	vacuole	40.94	44.42
TraesCS7B01G273700.1	Wheat	vacuole	40.24	44.42
Os06t0549300-00	Rice	extracellular	40.24	44.17
TraesCS7B01G273600.1	Wheat	vacuole	39.72	44.1
HORVU2Hr1G008270.1	Barley	peroxisome	23.87	44.05
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	39.72	44.02
TraesCS1D01G443200.1	Wheat	cytosol	24.22	43.99
HORVU7Hr1G089270.1	Barley	vacuole	40.77	43.98
TraesCS7A01G353900.1	Wheat	vacuole	39.72	43.93
TraesCS7A01G354100.1	Wheat	vacuole	33.28	43.91
TraesCS7D01G368800.1	Wheat	vacuole	39.72	43.85
HORVU7Hr1G089160.3	Barley	vacuole	40.07	43.81
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	39.9	43.79
Zm00001d046318_P001	Maize	vacuole	40.42	43.69
Zm00001d037005_P001	Maize	vacuole	39.72	43.51
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	40.07	43.48
KXG20147	Sorghum	vacuole	40.59	43.47
TraesCS4B01G391900.1	Wheat	vacuole	38.5	43.16
Zm00001d037008_P001	Maize	golgi, vacuole	38.33	43.05
TraesCS2B01G017300.1	Wheat	plastid	30.66	43.03
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	38.68	43.02
Os06t0548100-00	Rice	golgi	40.07	42.99
TraesCS5D01G268800.1	Wheat	vacuole	39.2	42.86
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.2	42.78
TraesCS1B01G469800.1	Wheat	vacuole	40.07	42.75
TraesCSU01G034600.1	Wheat	vacuole	38.33	42.72
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	30.84	42.65
TraesCS5D01G309100.1	Wheat	vacuole	38.68	42.61
TraesCS1D01G338700.1	Wheat	plasma membrane	39.72	42.54
TraesCS2A01G051500.1	Wheat	peroxisome	25.26	42.52
Os06t0548200-01	Rice	extracellular	39.55	42.51
TraesCS5A01G261400.1	Wheat	vacuole	38.85	42.48
Os06t0549600-01	Rice	extracellular	38.85	42.4
HORVU2Hr1G122590.1	Barley	vacuole	39.37	42.24
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	37.98	42.17
TraesCS2B01G066900.1	Wheat	nucleus, unclear	38.68	42.13
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.46	42.12
TraesCS5B01G302700.1	Wheat	vacuole	38.15	42.12
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.5	42.1
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.37	42.09
KXG28418	Sorghum	vacuole	38.68	42.05
Zm00001d049169_P001	Maize	vacuole	38.68	42.05
KXG20146	Sorghum	extracellular	39.02	42.03
HORVU2Hr1G008300.1	Barley	plastid	38.5	42.02
TraesCS2B01G172300.1	Wheat	vacuole	38.68	41.97
TraesCS4B01G358600.1	Wheat	golgi	38.15	41.87
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.5	41.86
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	39.2	41.82
TraesCS2D01G151500.1	Wheat	vacuole	38.5	41.78
TraesCS2D01G052300.1	Wheat	plastid	38.33	41.75
EER89908	Sorghum	plasma membrane, vacuole	39.2	41.74
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	37.8	41.73
TraesCS2B01G066800.1	Wheat	vacuole	38.33	41.67
HORVU2Hr1G000540.1	Barley	golgi, vacuole	39.37	41.62
TraesCS7B01G273500.1	Wheat	plastid	39.37	41.62
TraesCS2A01G542600.1	Wheat	vacuole	38.5	41.62
Zm00001d046322_P001	Maize	extracellular	38.5	41.62
TraesCS1B01G456900.1	Wheat	vacuole	36.06	41.57
TraesCS2A01G052600.1	Wheat	vacuole	38.5	41.54
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	38.33	41.51
TraesCS7D01G393900.1	Wheat	vacuole	37.8	41.49
TraesCS2D01G052400.1	Wheat	vacuole	28.92	41.29
Os06t0549633-00	Rice	vacuole	37.98	41.29
TraesCS2A01G052900.1	Wheat	unclear	37.98	41.29
TraesCS7A01G126600.1	Wheat	vacuole	37.28	41.15
HORVU7Hr1G093940.1	Barley	vacuole	37.98	41.13
TraesCS2B01G066400.1	Wheat	plastid	37.8	41.1
TraesCS2D01G052700.1	Wheat	unclear	37.8	41.1
TraesCS7A01G400100.1	Wheat	unclear	37.46	40.95
TraesCS1D01G433600.1	Wheat	vacuole	38.5	40.93
TraesCS4D01G101000.1	Wheat	golgi	38.68	40.88
EER89907	Sorghum	plasma membrane, vacuole	37.46	40.87
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.18	40.87
HORVU1Hr1G092680.1	Barley	golgi, vacuole	38.15	40.86
TraesCS4B01G104000.1	Wheat	vacuole	38.68	40.81
TraesCS4A01G212100.1	Wheat	vacuole	38.5	40.77
TraesCS1A01G424100.1	Wheat	vacuole	36.06	40.59
TraesCS2B01G572400.1	Wheat	unclear	37.46	40.57
KXG26140	Sorghum	plasma membrane	37.8	40.56
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	37.11	40.34
HORVU4Hr1G017270.1	Barley	vacuole	38.15	40.33
Zm00001d046319_P001	Maize	vacuole	36.76	40.11
TraesCS2B01G016900.1	Wheat	vacuole	36.06	39.96
TraesCS2D01G006000.1	Wheat	plastid	35.19	39.92
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	36.59	39.85
HORVU2Hr1G008310.1	Barley	golgi, vacuole	37.63	39.78
TraesCS7B01G026000.1	Wheat	cytosol	23.0	39.76
EES13185	Sorghum	vacuole	37.8	39.74
HORVU2Hr1G013930.1	Barley	golgi, vacuole	37.8	39.74
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	36.59	39.62
KXG20949	Sorghum	vacuole	37.28	39.56
TraesCS3A01G111600.1	Wheat	vacuole	36.59	39.55
Os06t0548800-01	Rice	extracellular	36.41	39.36
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	39.37	39.3
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	35.19	39.3
TraesCS2B01G145300.1	Wheat	plasma membrane	39.02	39.16
TraesCS7A01G353800.1	Wheat	vacuole	35.37	39.04
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	35.37	39.04
TraesCS2D01G543700.1	Wheat	unclear	38.15	39.04
TraesCS4B01G222500.1	Wheat	plasma membrane	38.15	38.69
TraesCS2A01G005700.1	Wheat	vacuole	33.28	38.59
TraesCS7B01G273800.1	Wheat	plasma membrane	35.02	38.58
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	38.15	38.22
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	38.5	38.17
TraesCS4D01G223000.1	Wheat	plasma membrane	37.63	38.16
Os11t0495950-00	Rice	plasma membrane, vacuole	35.89	38.15
HORVU7Hr1G089190.1	Barley	vacuole	34.84	38.1
TraesCS7B01G273900.1	Wheat	vacuole	34.49	38.08
TraesCS4A01G081300.1	Wheat	unclear	37.46	38.05
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	34.49	37.93
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	34.49	37.93
Os02t0235900-01	Rice	plasma membrane, vacuole	37.46	37.92
TraesCS7D01G472000.1	Wheat	vacuole	34.15	37.55
Zm00001d037009_P001	Maize	plasma membrane	38.33	37.54
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	37.98	37.52
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	14.29	37.44
TraesCS2D01G126400.1	Wheat	golgi, vacuole	37.11	36.79
TraesCS2B01G145500.1	Wheat	vacuole	37.28	36.77
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	37.11	36.66
Zm00001d016199_P001	Maize	mitochondrion	35.71	36.54
TraesCS3B01G070000.1	Wheat	mitochondrion	17.94	36.52
KXG29886	Sorghum	mitochondrion	36.41	35.97
HORVU7Hr1G089210.1	Barley	mitochondrion	36.59	34.2
KXG29885	Sorghum	plastid	29.62	33.93
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	13.94	33.47
HORVU7Hr1G089260.1	Barley	mitochondrion	28.22	33.33
HORVU7Hr1G026630.1	Barley	plastid	27.18	30.77
VIT_18s0089g01200.t01	Wine grape	plasma membrane	36.93	18.36

Protein Annotations

EntrezGene:100245607	wikigene:100245607	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1
EMBL:AM477047	InterPro:BBE	ProteinID:CAN81650	ProteinID:CAN81650.1	ProteinID:CCB55878	ProteinID:CCB55878.1
UniProt:F6HM03	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	EMBL:FN595992	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167
EntrezGene:LOC100245607	wikigene:LOC100245607	InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	PFscan:PS51257
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF34	SUPFAM:SSF56176	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000210A16F	ArrayExpress:VIT_10s0003g05450	EnsemblPlantsGene:VIT_10s0003g05450	EnsemblPlants:VIT_10s0003g05450.t01	unigene:Vvi.9013	RefSeq:XP_002268606
RefSeq:XP_002268606.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:-:10089099..10098884

Molecular Weight (calculated)

63860.2 Da

IEP (calculated)

6.723

GRAVY (calculated)

-0.118

Length

574 amino acids

Sequence
(BLAST)

001: MRTASSASVF GLVFLLGFLF FSSSSSSCEA SDSVYDTFIQ CLASHSDPSP PASSIVYNQS NSSYTTVLQS YIRNRRFNTS STPKPLIIVT PLVESHVQAA
101: ILCSKNVGME MKIRSGGHDY DGLSYISDIP FFILDLFNLR AIDVNIGDET AWVQAGATLG ELYYRIWEKS KLHGFPAGVG QTVGAGGHIS GGGYGTMLRK
201: YGLSIDQLVD AKIVDVNGRI LDRKAMGEDL FWAIRGGGGS SFGVILAYKI KLVAVPETVT VFRVQRTLDQ NATDLVYKWQ LVADKIDNDL FIRVLLQPVT
301: VNKNRTIRAS FVSLFLGDAA RLLSVMDKDF PALGLKKEDC MEMSWIESVL YWANFDNGTS PDALLNRTSD SVNFLKRKSD YVQTPISKDG LEWMWKKMIE
401: IGKTGLVFNP YGGRMSEIPS SETAFPHRAG NIYKIQYSVN WSEEGEEADK EYMTQIRRLY SYMTPFVSKS PRGSFLNYRD VDIGVTKTWS YDEGKVYGAK
501: YFMNNFDRLV KVKTAWDGAG LFGTHISVSV DVNMEAKPVE LIGMTFHQKP PTVDWMDGTF DNALLSPAIP NCSS

Best Arabidopsis Sequence Match ( AT4G20840.1 )
(BLAST)

001: MIATQTFVSV FFFVFFLVSL PFFSSAAPPS SDSIYESFVQ CFSDKTKSPQ AQITDNVFSR TNPSFSSVLR AYIRNGRFNT SSTPKPAIIV TPRSDIHVSA
101: AVTCSKSLNF LLKIRSGGHD YEGLSYISDK PFFILDMSNL RDVSVDIADQ SAWISAGATL GEVYYRIWEK SKVHGFPAGV CPTVGVGGHI SGGGYGNMLR
201: KFGLSVDNLI DAKIVDVNGQ ILDRKSMGED LFWAISGGGG ASFGVVLGYK VKLVPVPETV TVFRVEKYMD SGAVDMVHKW QSVGPKTDRN LFLRMLIQPV
301: TRKKVKTVRA TVVALFLGRA EEVVALLGKE FPELSLKKEN CSEMTWFQSA LWWDNRVNPT QIDPKVFLDR NLDRANFGKR KSDYVASEIP RDGIESLFKK
401: MTELGKIGLV FNPYGGKMAE VTVNATPFPH RSKLFKIQYS VTWQENSVEI EKGFLNQANV LYSFMTGFVS KNPRNAYLNY RDVDIGVNDH GTNSYEEGEV
501: YGRKYFGDNF DRLVKVKTAA DPDNFFRNEQ SIPTVLSKA

Arabidopsis Description

Berberine bridge enzyme-like 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.