Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 3
- vacuole 6
- extracellular 4
- endoplasmic reticulum 4
- plasma membrane 5
- golgi 4
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_12s0028g01770.t01 | Wine grape | plasma membrane, vacuole | 96.27 | 90.53 |
VIT_12s0028g01790.t01 | Wine grape | plastid | 72.57 | 71.38 |
VIT_10s0003g05390.t01 | Wine grape | extracellular | 59.51 | 59.63 |
VIT_10s0003g05550.t01 | Wine grape | vacuole | 58.58 | 59.13 |
VIT_10s0003g05620.t01 | Wine grape | vacuole | 58.58 | 59.13 |
VIT_10s0003g05580.t01 | Wine grape | plasma membrane, vacuole | 58.4 | 58.95 |
VIT_10s0003g05420.t01 | Wine grape | vacuole | 56.72 | 56.4 |
VIT_10s0003g05570.t01 | Wine grape | plasma membrane, vacuole | 58.21 | 56.01 |
GSMUA_Achr3P23450_001 | Banana | plasma membrane, vacuole | 46.64 | 55.8 |
KRH42267 | Soybean | vacuole | 54.66 | 55.6 |
KRH58391 | Soybean | vacuole | 53.92 | 54.53 |
KRH42268 | Soybean | vacuole | 53.17 | 53.88 |
VIT_03s0017g01470.t01 | Wine grape | vacuole | 30.97 | 53.04 |
VIT_10s0003g05470.t01 | Wine grape | vacuole | 55.78 | 52.92 |
VIT_10s0003g04730.t01 | Wine grape | plasma membrane, vacuole | 52.43 | 52.52 |
GSMUA_Achr3P23470_001 | Banana | extracellular, plasma membrane, vacuole | 39.37 | 50.84 |
HORVU7Hr1G089270.1 | Barley | vacuole | 50.37 | 50.75 |
VIT_03s0017g01490.t01 | Wine grape | vacuole | 51.31 | 50.46 |
TraesCS7A01G353700.1 | Wheat | extracellular, vacuole | 49.63 | 50.0 |
KXG20146 | Sorghum | extracellular | 49.63 | 49.91 |
VIT_03s0017g01420.t01 | Wine grape | cytosol, peroxisome, vacuole | 51.12 | 49.64 |
TraesCS7D01G369200.1 | Wheat | extracellular, vacuole | 48.88 | 49.53 |
VIT_10s0003g05450.t01 | Wine grape | extracellular | 52.99 | 49.48 |
Zm00001d046322_P001 | Maize | extracellular | 48.88 | 49.34 |
TraesCS1D01G443200.1 | Wheat | cytosol | 28.92 | 49.05 |
KRH11825 | Soybean | vacuole | 47.76 | 49.04 |
TraesCS7A01G354100.1 | Wheat | vacuole | 39.37 | 48.51 |
Os06t0548100-00 | Rice | golgi | 48.32 | 48.41 |
KXG20147 | Sorghum | vacuole | 48.13 | 48.13 |
Os06t0548200-01 | Rice | extracellular | 47.95 | 48.13 |
TraesCS7A01G353600.1 | Wheat | cytosol, nucleus, peroxisome | 19.59 | 47.95 |
TraesCS7B01G026000.1 | Wheat | cytosol | 29.66 | 47.89 |
TraesCS7D01G369100.1 | Wheat | plasma membrane, vacuole | 50.37 | 47.79 |
HORVU7Hr1G089280.1 | Barley | mitochondrion, peroxisome, plasma membrane | 47.95 | 47.77 |
TraesCS7D01G368500.1 | Wheat | plasma membrane, vacuole | 46.08 | 47.68 |
TraesCS1D01G338700.1 | Wheat | plasma membrane | 47.57 | 47.57 |
TraesCS7D01G124500.1 | Wheat | plasma membrane, vacuole | 46.08 | 47.5 |
EER89910 | Sorghum | vacuole | 46.46 | 47.07 |
TraesCS2B01G172300.1 | Wheat | vacuole | 46.46 | 47.07 |
Zm00001d037005_P001 | Maize | vacuole | 45.9 | 46.95 |
TraesCS5D01G268800.1 | Wheat | vacuole | 45.71 | 46.67 |
Os06t0549633-00 | Rice | vacuole | 45.9 | 46.59 |
EER89909 | Sorghum | extracellular, plasma membrane, vacuole | 45.71 | 46.58 |
TraesCS1A01G433900.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 46.64 | 46.55 |
TraesCS7A01G126600.1 | Wheat | vacuole | 45.15 | 46.54 |
TraesCS5A01G261400.1 | Wheat | vacuole | 45.52 | 46.48 |
TraesCS1B01G469800.1 | Wheat | vacuole | 46.64 | 46.47 |
TraesCS4B01G222500.1 | Wheat | plasma membrane | 48.88 | 46.29 |
TraesCS4A01G081300.1 | Wheat | unclear | 48.69 | 46.19 |
Zm00001d046318_P001 | Maize | vacuole | 45.71 | 46.14 |
TraesCS4D01G223000.1 | Wheat | plasma membrane | 48.69 | 46.11 |
TraesCS7D01G368700.1 | Wheat | unclear | 44.4 | 46.03 |
TraesCS2D01G151500.1 | Wheat | vacuole | 45.34 | 45.94 |
TraesCS1D01G433600.1 | Wheat | vacuole | 46.27 | 45.93 |
GSMUA_Achr3P23440_001 | Banana | extracellular, plasma membrane | 44.03 | 45.91 |
TraesCS7A01G354000.1 | Wheat | vacuole | 44.22 | 45.84 |
Zm00001d046319_P001 | Maize | vacuole | 44.96 | 45.82 |
TraesCS2A01G051500.1 | Wheat | peroxisome | 29.1 | 45.75 |
HORVU2Hr1G008330.1 | Barley | extracellular, plasma membrane, vacuole | 45.15 | 45.66 |
HORVU2Hr1G008270.1 | Barley | peroxisome | 26.49 | 45.66 |
TraesCS1B01G456900.1 | Wheat | vacuole | 42.35 | 45.58 |
TraesCS2B01G017300.1 | Wheat | plastid | 34.7 | 45.48 |
Os06t0549600-01 | Rice | extracellular | 44.59 | 45.44 |
Os02t0235900-01 | Rice | plasma membrane, vacuole | 47.95 | 45.33 |
TraesCS1A01G424100.1 | Wheat | vacuole | 43.1 | 45.29 |
HORVU1Hr1G092680.1 | Barley | golgi, vacuole | 45.15 | 45.15 |
Os06t0549900-01 | Rice | extracellular | 44.4 | 45.08 |
TraesCS7B01G273600.1 | Wheat | vacuole | 43.47 | 45.07 |
TraesCS2A01G052700.1 | Wheat | extracellular, plasma membrane, plastid, vacuole | 43.84 | 44.93 |
HORVU4Hr1G062830.1 | Barley | mitochondrion, peroxisome, plasma membrane | 48.69 | 44.92 |
HORVU7Hr1G089160.3 | Barley | vacuole | 43.84 | 44.76 |
Os06t0549300-00 | Rice | extracellular | 43.66 | 44.74 |
KXG20949 | Sorghum | vacuole | 45.15 | 44.73 |
TraesCS2D01G006000.1 | Wheat | plastid | 41.98 | 44.47 |
Zm00001d016199_P001 | Maize | mitochondrion | 46.46 | 44.38 |
TraesCS2A01G052800.1 | Wheat | plastid, vacuole | 43.47 | 44.38 |
TraesCS3B01G070000.1 | Wheat | mitochondrion | 23.32 | 44.33 |
EES13185 | Sorghum | vacuole | 45.15 | 44.32 |
TraesCS2D01G052500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.66 | 44.32 |
TraesCS7A01G353900.1 | Wheat | vacuole | 42.91 | 44.32 |
Os06t0548800-01 | Rice | extracellular | 43.84 | 44.26 |
TraesCS7B01G388200.1 | Wheat | extracellular, plasma membrane, vacuole | 43.1 | 44.25 |
TraesCS7A01G353800.1 | Wheat | vacuole | 42.91 | 44.23 |
TraesCS7B01G273700.1 | Wheat | vacuole | 42.91 | 44.23 |
TraesCS2D01G052300.1 | Wheat | plastid | 43.47 | 44.21 |
TraesCS7B01G273500.1 | Wheat | plastid | 44.78 | 44.2 |
EER89908 | Sorghum | plasma membrane, vacuole | 44.4 | 44.16 |
TraesCS5D01G309100.1 | Wheat | vacuole | 42.91 | 44.15 |
TraesCS2A01G052900.1 | Wheat | unclear | 43.47 | 44.13 |
TraesCS7A01G484600.1 | Wheat | extracellular, plasma membrane, vacuole | 42.91 | 44.06 |
TraesCS7D01G369000.1 | Wheat | extracellular, vacuole | 42.72 | 44.04 |
Zm00001d037008_P001 | Maize | golgi, vacuole | 41.98 | 44.03 |
TraesCS2B01G066900.1 | Wheat | nucleus, unclear | 43.28 | 44.02 |
TraesCS2A01G052600.1 | Wheat | vacuole | 43.66 | 43.98 |
KXG28418 | Sorghum | vacuole | 43.28 | 43.94 |
EER89907 | Sorghum | plasma membrane, vacuole | 43.1 | 43.92 |
TraesCS7D01G368800.1 | Wheat | vacuole | 42.54 | 43.85 |
HORVU3Hr1G020240.1 | Barley | extracellular, plasma membrane, vacuole | 43.28 | 43.77 |
TraesCS7B01G273800.1 | Wheat | plasma membrane | 42.54 | 43.76 |
TraesCS3B01G132200.1 | Wheat | extracellular, plasma membrane, vacuole | 43.1 | 43.75 |
HORVU2Hr1G008300.1 | Barley | plastid | 42.91 | 43.73 |
TraesCS7D01G472000.1 | Wheat | vacuole | 42.54 | 43.68 |
TraesCS3D01G113700.1 | Wheat | extracellular, plasma membrane, vacuole | 42.91 | 43.64 |
TraesCS2B01G066400.1 | Wheat | plastid | 42.91 | 43.56 |
TraesCS7B01G273900.1 | Wheat | vacuole | 42.16 | 43.46 |
TraesCS7D01G393900.1 | Wheat | vacuole | 42.35 | 43.4 |
Zm00001d049169_P001 | Maize | vacuole | 42.72 | 43.37 |
TraesCS5B01G302700.1 | Wheat | vacuole | 41.98 | 43.27 |
TraesCS2B01G572400.1 | Wheat | unclear | 42.72 | 43.21 |
TraesCS2D01G052700.1 | Wheat | unclear | 42.54 | 43.18 |
HORVU2Hr1G122590.1 | Barley | vacuole | 43.1 | 43.18 |
TraesCS3A01G111600.1 | Wheat | vacuole | 42.72 | 43.13 |
HORVU2Hr1G000540.1 | Barley | golgi, vacuole | 43.66 | 43.09 |
TraesCS2B01G016900.1 | Wheat | vacuole | 41.6 | 43.05 |
TraesCS2B01G066800.1 | Wheat | vacuole | 42.35 | 42.99 |
TraesCS2A01G542600.1 | Wheat | vacuole | 42.54 | 42.94 |
KXG29886 | Sorghum | mitochondrion | 46.46 | 42.86 |
TraesCS7A01G400100.1 | Wheat | unclear | 41.98 | 42.86 |
TraesCS4B01G358600.1 | Wheat | golgi | 41.79 | 42.83 |
TraesCS4B01G391900.1 | Wheat | vacuole | 40.86 | 42.77 |
HORVU4Hr1G086520.1 | Barley | plasma membrane, vacuole | 41.23 | 42.75 |
TraesCS2A01G005700.1 | Wheat | vacuole | 39.37 | 42.63 |
KXG26140 | Sorghum | plasma membrane | 42.54 | 42.62 |
TraesCS2D01G052400.1 | Wheat | vacuole | 31.9 | 42.54 |
HORVU7Hr1G089190.1 | Barley | vacuole | 41.6 | 42.48 |
TraesCS5A01G555000.1 | Wheat | plasma membrane, vacuole | 40.86 | 42.44 |
HORVU2Hr1G008310.1 | Barley | golgi, vacuole | 42.91 | 42.36 |
HORVU7Hr1G093940.1 | Barley | vacuole | 41.79 | 42.26 |
TraesCSU01G034600.1 | Wheat | vacuole | 40.49 | 42.14 |
HORVU2Hr1G013930.1 | Barley | golgi, vacuole | 42.54 | 41.76 |
TraesCS2D01G126200.1 | Wheat | plasma membrane, vacuole | 44.78 | 41.74 |
TraesCS2B01G145300.1 | Wheat | plasma membrane | 44.4 | 41.61 |
KXG29885 | Sorghum | plastid | 38.81 | 41.52 |
TraesCS4A01G212100.1 | Wheat | vacuole | 41.98 | 41.51 |
TraesCS7D01G368900.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.47 | 41.42 |
TraesCS4D01G101000.1 | Wheat | golgi | 41.79 | 41.25 |
HORVU2Hr1G000530.1 | Barley | plasma membrane, vacuole | 33.58 | 41.1 |
Zm00001d037009_P001 | Maize | plasma membrane | 44.78 | 40.96 |
Os11t0495950-00 | Rice | plasma membrane, vacuole | 41.23 | 40.93 |
HORVU4Hr1G017270.1 | Barley | vacuole | 41.42 | 40.88 |
TraesCS2A01G123200.1 | Wheat | plasma membrane, vacuole | 43.66 | 40.84 |
TraesCS4B01G104000.1 | Wheat | vacuole | 41.42 | 40.81 |
TraesCS2D01G543700.1 | Wheat | unclear | 42.54 | 40.64 |
HORVU2Hr1G021650.2 | Barley | golgi, mitochondrion, plastid, vacuole | 43.47 | 40.24 |
TraesCS2A01G123400.1 | Wheat | plasma membrane, vacuole | 43.28 | 39.93 |
TraesCS2D01G126400.1 | Wheat | golgi, vacuole | 42.91 | 39.72 |
TraesCS2B01G145500.1 | Wheat | vacuole | 43.1 | 39.69 |
HORVU7Hr1G089210.1 | Barley | mitochondrion | 43.84 | 38.27 |
HORVU7Hr1G089260.1 | Barley | mitochondrion | 31.34 | 34.57 |
HORVU7Hr1G026630.1 | Barley | plastid | 32.46 | 34.32 |
VIT_18s0089g01200.t01 | Wine grape | plasma membrane | 42.91 | 19.91 |
Protein Annotations
EntrezGene:100248870 | wikigene:100248870 | Gene3D:3.30.43.10 | Gene3D:3.30.465.50 | Gene3D:3.40.462.20 | MapMan:50.1.1 |
EMBL:AM443436 | InterPro:BBE | ProteinID:CAN63059 | ProteinID:CAN63059.1 | ProteinID:CCB47394 | ProteinID:CCB47394.1 |
UniProt:F6H526 | InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf | InterPro:FAD-bd_2_sub1 | EMBL:FN595235 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
GO:GO:0016614 | GO:GO:0050660 | GO:GO:0055114 | GO:GO:0071949 | InterPro:IPR016166 | InterPro:IPR016167 |
EntrezGene:LOC100248870 | wikigene:LOC100248870 | InterPro:Oxid_FAD_bind_N | PFAM:PF01565 | PFAM:PF08031 | PFscan:PS51387 |
PANTHER:PTHR32448 | PANTHER:PTHR32448:SF54 | SUPFAM:SSF56176 | SignalP:SignalP-noTM | UniParc:UPI00019844B9 | ArrayExpress:VIT_12s0028g01780 |
EnsemblPlantsGene:VIT_12s0028g01780 | EnsemblPlants:VIT_12s0028g01780.t01 | unigene:Vvi.24188 | RefSeq:XP_002277294 | RefSeq:XP_002277294.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:+:2410313..2411934
Molecular Weight (calculated)
59741.0 Da
IEP (calculated)
7.047
GRAVY (calculated)
-0.148
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSSCAETY ILVFTLLFSS VSWAASSSVH QNFLQCLTLN SNSSTPITKV VYTPHNSSYE TVLDFSIQNL RFTSSCTPRP QVIVTPLLVS HIQAAVICSK
101: KYGLQIRARS GGHDYEGLSY VSEVPFIIVD LLELRSINVD VEDGSAWVEA GATLGEVYYS IANKTATHGF PAGICPTVGV GGHLSGGGYG TLLRKYGLAA
201: DNIIDAYIVD SNGTLLNRES MGEDLFWAIR GGGGASFGII VSWKIKLVPV PSTVTVFTVT RTLEQDAEKI LLKWQQVADK LHEDLFIRVY VQAVNGSQEG
301: ERTISSTYES LFLGNTSGLL SLMNESFPEL GLAADDCNET SWIESVLYFA GFSGQPLDVL LNRSQTSKNY FKNKSDFLKE PIPETGLHGI WKLFYELKNA
401: TGMIIISPYG GRMNEIPETE TPFPHRKGSL YSIQYVVNWL EEGEEVSKRH IDWTRKLYKY MAPYVSKSPR AAYLNYRDLD LGRNKNGNTS YAQASIWGLK
501: YYKINFNRLV QVKTKVDPSN FFRNEQSIPL SSWWKK
101: KYGLQIRARS GGHDYEGLSY VSEVPFIIVD LLELRSINVD VEDGSAWVEA GATLGEVYYS IANKTATHGF PAGICPTVGV GGHLSGGGYG TLLRKYGLAA
201: DNIIDAYIVD SNGTLLNRES MGEDLFWAIR GGGGASFGII VSWKIKLVPV PSTVTVFTVT RTLEQDAEKI LLKWQQVADK LHEDLFIRVY VQAVNGSQEG
301: ERTISSTYES LFLGNTSGLL SLMNESFPEL GLAADDCNET SWIESVLYFA GFSGQPLDVL LNRSQTSKNY FKNKSDFLKE PIPETGLHGI WKLFYELKNA
401: TGMIIISPYG GRMNEIPETE TPFPHRKGSL YSIQYVVNWL EEGEEVSKRH IDWTRKLYKY MAPYVSKSPR AAYLNYRDLD LGRNKNGNTS YAQASIWGLK
501: YYKINFNRLV QVKTKVDPSN FFRNEQSIPL SSWWKK
001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE
Arabidopsis Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.