Factsheet for VIT_10s0003g05580.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g05550.t01	Wine grape	vacuole	95.67	95.67
VIT_10s0003g05620.t01	Wine grape	vacuole	95.29	95.29
VIT_10s0003g05570.t01	Wine grape	plasma membrane, vacuole	89.08	84.92
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	57.06	70.3
KRH11845	Soybean	vacuole	68.36	67.85
KRH36853	Soybean	vacuole	67.04	66.29
KRH11844	Soybean	vacuole	67.23	65.99
KRH36852	Soybean	plastid	54.99	65.91
Solyc02g070090.1.1	Tomato	extracellular	65.72	65.36
CDY72595	Canola	extracellular, vacuole	44.63	62.37
Bra023122.1-P	Field mustard	vacuole	61.96	62.08
CDY68515	Canola	extracellular, plasma membrane	44.07	61.58
AT1G30700.1	Thale cress	vacuole	60.64	61.1
KRH11841	Soybean	vacuole	64.03	60.82
VIT_03s0017g01470.t01	Wine grape	vacuole	35.78	60.7
KRH36851	Soybean	vacuole	63.65	59.82
VIT_03s0017g01490.t01	Wine grape	vacuole	60.83	59.27
VIT_12s0028g01780.t01	Wine grape	plasma membrane, vacuole	58.95	58.4
VIT_10s0003g04730.t01	Wine grape	plasma membrane, vacuole	58.38	57.94
VIT_10s0003g05470.t01	Wine grape	vacuole	61.02	57.35
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	59.51	57.25
KRH71761	Soybean	mitochondrion, plastid, vacuole	44.82	56.0
VIT_12s0028g01790.t01	Wine grape	plastid	57.44	55.96
VIT_10s0003g05450.t01	Wine grape	extracellular	59.89	55.4
VIT_12s0028g01770.t01	Wine grape	plasma membrane, vacuole	58.76	54.74
KRH12123	Soybean	plastid	47.08	54.59
VIT_10s0003g05390.t01	Wine grape	extracellular	52.73	52.34
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	43.88	52.01
VIT_10s0003g05420.t01	Wine grape	vacuole	52.73	51.95
TraesCS1D01G443200.1	Wheat	cytosol	28.06	47.15
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	46.89	46.8
TraesCS2B01G172300.1	Wheat	vacuole	46.14	46.31
TraesCS2D01G151500.1	Wheat	vacuole	46.14	46.31
TraesCS7A01G354100.1	Wheat	vacuole	37.85	46.21
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	45.95	46.12
TraesCS1B01G469800.1	Wheat	vacuole	46.7	46.1
HORVU7Hr1G089270.1	Barley	vacuole	46.14	46.05
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	35.97	46.02
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.33	45.81
Os06t0548100-00	Rice	golgi	46.14	45.79
TraesCS1D01G338700.1	Wheat	plasma membrane	46.14	45.71
KXG20146	Sorghum	extracellular	45.76	45.59
Zm00001d046322_P001	Maize	extracellular	45.57	45.57
TraesCS1B01G456900.1	Wheat	vacuole	42.56	45.38
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	44.26	45.37
Os06t0548200-01	Rice	extracellular	45.57	45.32
TraesCS1A01G424100.1	Wheat	vacuole	43.31	45.1
Os06t0549900-01	Rice	extracellular	44.82	45.08
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	45.57	44.98
TraesCS7B01G273600.1	Wheat	vacuole	43.69	44.87
TraesCS7D01G368700.1	Wheat	unclear	43.69	44.87
TraesCS1D01G433600.1	Wheat	vacuole	45.57	44.81
TraesCS7A01G354000.1	Wheat	vacuole	43.5	44.68
HORVU1Hr1G092680.1	Barley	golgi, vacuole	45.01	44.59
EER89907	Sorghum	plasma membrane, vacuole	44.07	44.49
TraesCS7B01G273700.1	Wheat	vacuole	43.5	44.42
KXG20147	Sorghum	vacuole	44.63	44.22
TraesCS7A01G353900.1	Wheat	vacuole	43.13	44.12
EER89910	Sorghum	vacuole	43.5	43.67
TraesCS7D01G368800.1	Wheat	vacuole	42.75	43.65
KXG20949	Sorghum	vacuole	44.44	43.62
HORVU7Hr1G089160.3	Barley	vacuole	43.13	43.62
TraesCS5D01G268800.1	Wheat	vacuole	43.13	43.62
TraesCS7A01G400100.1	Wheat	unclear	43.13	43.62
TraesCS7D01G393900.1	Wheat	vacuole	42.94	43.59
TraesCS4B01G391900.1	Wheat	vacuole	42.0	43.55
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	46.33	43.54
Zm00001d046319_P001	Maize	vacuole	43.13	43.54
TraesCS7A01G126600.1	Wheat	vacuole	42.56	43.46
TraesCS5A01G261400.1	Wheat	vacuole	42.94	43.43
Os06t0549300-00	Rice	extracellular	42.75	43.4
TraesCS2A01G052900.1	Wheat	unclear	43.13	43.37
Zm00001d046318_P001	Maize	vacuole	43.31	43.31
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	42.0	43.22
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	42.94	43.18
Os06t0549600-01	Rice	extracellular	42.75	43.16
Zm00001d037005_P001	Maize	vacuole	42.56	43.13
TraesCS4D01G101000.1	Wheat	golgi	44.07	43.09
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	42.18	43.08
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	42.75	43.07
Zm00001d037008_P001	Maize	golgi, vacuole	41.43	43.05
TraesCS2B01G017300.1	Wheat	plastid	33.15	43.03
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	42.94	43.02
TraesCS4A01G212100.1	Wheat	vacuole	43.88	42.99
TraesCSU01G034600.1	Wheat	vacuole	41.62	42.91
HORVU4Hr1G017270.1	Barley	vacuole	43.88	42.91
EES13185	Sorghum	vacuole	44.07	42.86
TraesCS4B01G104000.1	Wheat	vacuole	43.88	42.83
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	42.18	42.83
Os06t0549633-00	Rice	vacuole	42.56	42.8
HORVU2Hr1G122590.1	Barley	vacuole	42.94	42.62
TraesCS7B01G273500.1	Wheat	plastid	43.5	42.54
HORVU7Hr1G093940.1	Barley	vacuole	42.37	42.45
EER89909	Sorghum	extracellular, plasma membrane, vacuole	42.0	42.4
Os06t0548800-01	Rice	extracellular	42.37	42.37
EER89908	Sorghum	plasma membrane, vacuole	42.94	42.3
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	42.18	42.26
KXG28418	Sorghum	vacuole	42.0	42.23
Zm00001d049169_P001	Maize	vacuole	42.0	42.23
TraesCS5D01G309100.1	Wheat	vacuole	41.43	42.23
TraesCS3A01G111600.1	Wheat	vacuole	42.18	42.18
TraesCS2B01G066900.1	Wheat	nucleus, unclear	41.81	42.13
TraesCS2A01G052600.1	Wheat	vacuole	42.18	42.11
TraesCS2B01G572400.1	Wheat	unclear	42.0	42.08
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	40.68	42.02
TraesCS2B01G066800.1	Wheat	vacuole	41.62	41.86
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	40.68	41.78
TraesCS5B01G302700.1	Wheat	vacuole	40.87	41.73
TraesCS2A01G052800.1	Wheat	plastid, vacuole	41.24	41.71
TraesCS4B01G358600.1	Wheat	golgi	41.05	41.68
HORVU2Hr1G000540.1	Barley	golgi, vacuole	42.56	41.62
TraesCS2A01G542600.1	Wheat	vacuole	41.62	41.62
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.14	41.55
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.24	41.48
TraesCS2D01G052700.1	Wheat	unclear	41.05	41.29
TraesCS7B01G026000.1	Wheat	cytosol	25.8	41.27
HORVU2Hr1G008300.1	Barley	plastid	40.87	41.25
TraesCS2D01G052300.1	Wheat	plastid	40.87	41.18
HORVU2Hr1G008270.1	Barley	peroxisome	24.11	41.16
TraesCS2A01G051500.1	Wheat	peroxisome	26.37	41.06
TraesCS4B01G222500.1	Wheat	plasma membrane	43.69	40.99
TraesCS4A01G081300.1	Wheat	unclear	43.5	40.88
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	33.71	40.87
HORVU2Hr1G013930.1	Barley	golgi, vacuole	42.0	40.84
TraesCS2D01G052400.1	Wheat	vacuole	30.89	40.8
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.92	40.77
Os02t0235900-01	Rice	plasma membrane, vacuole	43.5	40.74
TraesCS2B01G066400.1	Wheat	plastid	40.49	40.72
TraesCS2D01G006000.1	Wheat	plastid	38.79	40.71
HORVU2Hr1G008310.1	Barley	golgi, vacuole	41.62	40.7
TraesCS7A01G353800.1	Wheat	vacuole	39.74	40.58
HORVU7Hr1G089190.1	Barley	vacuole	40.11	40.57
TraesCS7B01G273800.1	Wheat	plasma membrane	39.74	40.5
TraesCS4D01G223000.1	Wheat	plasma membrane	43.13	40.46
TraesCS2A01G005700.1	Wheat	vacuole	37.66	40.4
TraesCS2B01G016900.1	Wheat	vacuole	39.36	40.35
KXG26140	Sorghum	plasma membrane	40.49	40.19
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.36	40.04
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.36	40.04
TraesCS2B01G145300.1	Wheat	plasma membrane	42.94	39.86
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	43.13	39.83
TraesCS7B01G273900.1	Wheat	vacuole	38.98	39.81
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	43.5	39.76
TraesCS3B01G070000.1	Wheat	mitochondrion	21.09	39.72
TraesCS7D01G472000.1	Wheat	vacuole	38.98	39.66
Zm00001d016199_P001	Maize	mitochondrion	41.81	39.57
TraesCS2D01G543700.1	Wheat	unclear	41.62	39.39
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	42.0	38.92
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.51	38.91
Os11t0495950-00	Rice	plasma membrane, vacuole	39.36	38.7
KXG29886	Sorghum	mitochondrion	42.18	38.55
Zm00001d037009_P001	Maize	plasma membrane	42.18	38.23
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.62	38.17
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.49	37.01
KXG29885	Sorghum	plastid	34.84	36.93
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.92	36.61
TraesCS2B01G145500.1	Wheat	vacuole	40.11	36.6
HORVU7Hr1G089210.1	Barley	mitochondrion	41.43	35.83
HORVU7Hr1G089260.1	Barley	mitochondrion	30.32	33.13
HORVU7Hr1G026630.1	Barley	plastid	29.0	30.37
VIT_18s0089g01200.t01	Wine grape	plasma membrane	38.98	17.92

Protein Annotations

EntrezGene:100247412	wikigene:100247412	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1
InterPro:BBE	ProteinID:CCB55887	ProteinID:CCB55887.1	UniProt:F6HM12	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf
InterPro:FAD-bd_2_sub1	EMBL:FN595992	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	EntrezGene:LOC100247412	wikigene:LOC100247412	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF25	SUPFAM:SSF56176
SignalP:SignalP-noTM	UniParc:UPI00015CAF79	ArrayExpress:VIT_10s0003g05580	EnsemblPlantsGene:VIT_10s0003g05580	EnsemblPlants:VIT_10s0003g05580.t01	RefSeq:XP_002270181
RefSeq:XP_002270181.2	RefSeq:XP_010655774.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:10359501..10361112

Molecular Weight (calculated)

59110.8 Da

IEP (calculated)

8.184

GRAVY (calculated)

-0.153

Length

531 amino acids

Sequence
(BLAST)

001: MGTSSSSMLS LLSIILLLSL SWAASDSVHG AFLQCLSTHS QSSHPISAAL YTPDNSSYSS VLESYIRNLR FNTSTTPKPR LIITATHESH IQAAIICSKK
101: HGLQMKIRSG GHDFEGVSYV SDVPFFILDM FNLRSISVDI EDESAWVQAG ATLGEMYYRI AEKSKTHGFP AGVCPTVGAG GHFSGGGYGN MMRKYGLSVD
201: NIVDAELVDV NGRLLNRKSM GEDLFWAIIA GGGASYGVIV SYKIKLVQVP ATVTVFRVAR TLEQNATNIV YQWQQVADKV DGDLFIRLTM DVVNSSRSGE
301: KTVRATFLSL FLGSSERLLS IMNTRLPELG LQSSDCTEMS WVESVLFWTE FATGTPVEAL LDRNPQVLTH LKRKSDYLKE PIPKAGLEGI WKKMIELQTP
401: YLVFNPYGGK MAEISPSATP FPHRAGNLCK IMYATNWDEE GSEAAERYIN LTQKLYSYMT PFVSKSPREA FLNYRDLDLG VNHNGKNSYL EGRIYGIKYF
501: KENFNRLVRI KTKVDPGNFF RNEQSIPTLP Y

Best Arabidopsis Sequence Match ( AT1G30700.1 )
(BLAST)

001: MKYALILVLF FVVFIWQSSS SSANSETFTQ CLTSNSDPKH PISPAIFFSG NGSYSSVLQA NIRNLRFNTT STPKPFLIIA ATHESHVQAA ITCGKRHNLQ
101: MKIRSGGHDY DGLSYVTYSG KPFFVLDMFN LRSVDVDVAS KTAWVQTGAI LGEVYYYIWE KSKTLAYPAG ICPTVGVGGH ISGGGYGNMM RKYGLTVDNT
201: IDARMVDVNG KILDRKLMGE DLYWAINGGG GGSYGVVLAY KINLVEVPEN VTVFRISRTL EQNATDIIHR WQQVAPKLPD ELFIRTVIDV VNGTVSSQKT
301: VRTTFIAMFL GDTTTLLSIL NRRFPELGLV RSDCTETSWI QSVLFWTNIQ VGSSETLLLQ RNQPVNYLKR KSDYVREPIS RTGLESIWKK MIELEIPTMA
401: FNPYGGEMGR ISSTVTPFPY RAGNLWKIQY GANWRDETLT DRYMELTRKL YQFMTPFVSK NPRQSFFNYR DVDLGINSHN GKISSYVEGK RYGKKYFAGN
501: FERLVKIKTR VDSGNFFRNE QSIPVLP

Arabidopsis Description

Berberine bridge enzyme-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA85]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.