Factsheet for Zm00001d037009_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20147	Sorghum	vacuole	73.55	80.41
Os06t0548200-01	Rice	extracellular	64.16	70.41
HORVU7Hr1G089270.1	Barley	vacuole	63.65	70.11
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	62.63	68.98
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	63.48	65.84
Zm00001d046322_P001	Maize	extracellular	52.05	57.44
Zm00001d037005_P001	Maize	vacuole	47.27	52.86
Zm00001d046318_P001	Maize	vacuole	45.9	50.66
Zm00001d046319_P001	Maize	vacuole	43.34	48.29
Zm00001d037008_P001	Maize	golgi, vacuole	41.13	47.16
GSMUA_Achr2P15490_001	Banana	golgi, vacuole	33.45	46.78
Zm00001d049169_P001	Maize	vacuole	41.81	46.4
GSMUA_Achr4P31040_001	Banana	vacuole	41.47	45.51
Zm00001d016199_P001	Maize	mitochondrion	43.17	45.1
PGSC0003DMT400080465	Potato	cytosol	31.23	45.07
CDY68515	Canola	extracellular, plasma membrane	29.18	45.0
VIT_12s0028g01780.t01	Wine grape	plasma membrane, vacuole	40.96	44.78
CDY72595	Canola	extracellular, vacuole	29.01	44.74
VIT_10s0003g05390.t01	Wine grape	extracellular	40.44	44.3
VIT_03s0017g01470.t01	Wine grape	vacuole	23.55	44.09
PGSC0003DMT400080467	Potato	vacuole	40.44	44.05
Solyc06g065060.1.1	Tomato	extracellular	40.44	44.05
CDY29118	Canola	cytosol, peroxisome, plastid	29.18	43.85
KRH58398	Soybean	plasma membrane, vacuole	39.59	43.69
KRH42273	Soybean	nucleus	39.25	43.64
KRH42267	Soybean	vacuole	39.08	43.45
CDY59834	Canola	peroxisome, plasma membrane, plastid	33.28	43.43
KRH58387	Soybean	plastid, vacuole	40.61	43.35
CDY66956	Canola	peroxisome, plasma membrane, plastid	31.06	43.23
KRH42274	Soybean	mitochondrion, nucleus	38.57	43.21
PGSC0003DMT400080468	Potato	vacuole	38.91	43.18
KRH42266	Soybean	vacuole	39.59	43.04
KRH36852	Soybean	plastid	32.42	42.89
AT4G20820.1	Thale cress	plastid	38.91	42.86
KRH42268	Soybean	vacuole	38.57	42.72
KRH58391	Soybean	vacuole	38.57	42.64
Solyc06g065070.1.1	Tomato	vacuole	38.91	42.54
VIT_12s0028g01770.t01	Wine grape	plasma membrane, vacuole	41.13	42.28
KRH58388	Soybean	vacuole	39.42	42.23
VIT_10s0003g05580.t01	Wine grape	plasma membrane, vacuole	38.23	42.18
Bra024719.1-P	Field mustard	peroxisome, plastid, vacuole	32.42	42.04
VIT_12s0028g01790.t01	Wine grape	plastid	39.08	42.02
VIT_10s0003g05550.t01	Wine grape	vacuole	38.05	42.0
VIT_10s0003g05620.t01	Wine grape	vacuole	38.05	42.0
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	30.89	42.0
KRH56394	Soybean	vacuole	37.71	41.94
VIT_10s0003g05420.t01	Wine grape	vacuole	38.57	41.93
KRH36839	Soybean	nucleus	38.74	41.8
CDX94788	Canola	vacuole	38.23	41.79
CDX82776	Canola	endoplasmic reticulum, vacuole	38.05	41.76
Bra013475.1-P	Field mustard	golgi, vacuole	38.05	41.68
CDX79007	Canola	golgi, vacuole	38.05	41.68
KRH58389	Soybean	nucleus	38.05	41.6
KRH58399	Soybean	nucleus	37.88	41.57
KRH42808	Soybean	extracellular, vacuole	37.88	41.5
Solyc10g054480.1.1	Tomato	plastid	21.5	41.45
Bra023122.1-P	Field mustard	vacuole	37.37	41.32
Bra027549.1-P	Field mustard	peroxisome	31.57	41.29
KRH11824	Soybean	nucleus	38.23	41.25
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	37.03	41.1
KRH42269	Soybean	vacuole	37.2	41.05
AT5G44410.1	Thale cress	golgi	37.37	40.93
PGSC0003DMT400054571	Potato	cytosol	28.16	40.64
KRH58344	Soybean	vacuole	36.69	40.57
VIT_03s0017g01490.t01	Wine grape	vacuole	37.71	40.55
Solyc02g070060.1.1	Tomato	vacuole	36.35	40.49
Bra027552.1-P	Field mustard	peroxisome	23.55	40.47
PGSC0003DMT400054385	Potato	plastid	34.13	40.4
Bra033740.1-P	Field mustard	golgi	37.71	40.4
AT5G44360.2	Thale cress	golgi	37.71	40.33
CDY43653	Canola	golgi	20.99	40.33
KRH56395	Soybean	nucleus	36.35	40.26
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	35.84	40.23
AT4G20860.1	Thale cress	vacuole	36.35	40.19
Solyc02g070110.1.1	Tomato	extracellular, vacuole	36.35	40.19
KRH11845	Soybean	vacuole	36.69	40.19
VIT_10s0003g05470.t01	Wine grape	vacuole	38.74	40.18
CDY13104	Canola	extracellular, vacuole	36.52	40.15
CDY31432	Canola	vacuole	36.35	40.11
CDY31642	Canola	plasma membrane	34.81	40.08
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	35.67	40.04
VIT_10s0003g05570.t01	Wine grape	plasma membrane, vacuole	38.05	40.04
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	36.18	40.0
VIT_10s0003g04730.t01	Wine grape	plasma membrane, vacuole	36.52	40.0
CDY29116	Canola	extracellular, vacuole	36.35	39.96
CDY70228	Canola	cytosol, golgi, peroxisome	20.99	39.94
KRH11844	Soybean	vacuole	36.86	39.93
Bra020915.1-P	Field mustard	vacuole	36.18	39.92
PGSC0003DMT400086243	Potato	vacuole	35.84	39.92
CDX79034	Canola	plastid	35.49	39.92
CDX84280	Canola	plasma membrane	34.64	39.88
Bra005392.1-P	Field mustard	plasma membrane	36.18	39.85
AT1G30700.1	Thale cress	vacuole	35.84	39.85
CDX82800	Canola	extracellular	35.49	39.85
KRH11825	Soybean	vacuole	35.49	39.85
CDX94780	Canola	plasma membrane, vacuole	36.86	39.78
Bra027555.1-P	Field mustard	extracellular, vacuole	36.18	39.77
AT5G44390.1	Thale cress	vacuole	36.69	39.67
KRH36853	Soybean	vacuole	36.35	39.66
Bra013501.1-P	Field mustard	vacuole	36.01	39.66
CDX76449	Canola	vacuole	36.01	39.66
Solyc02g070130.1.1	Tomato	vacuole	36.01	39.59
CDY49007	Canola	vacuole	36.52	39.56
CDX98676	Canola	vacuole	36.35	39.52
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	36.01	39.51
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	36.01	39.51
Solyc02g070090.1.1	Tomato	extracellular	36.01	39.51
PGSC0003DMT400043091	Potato	extracellular	35.67	39.51
PGSC0003DMT400089776	Potato	golgi, vacuole	36.86	39.49
CDX79004	Canola	extracellular, vacuole	35.49	39.47
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	35.15	39.46
CDY16155	Canola	endoplasmic reticulum, extracellular, vacuole	34.98	39.42
Zm00001d049539_P001	Maize	extracellular, vacuole	36.86	39.42
CDY02321	Canola	extracellular, vacuole	36.01	39.37
Bra019831.1-P	Field mustard	plasma membrane, vacuole	35.67	39.36
CDX97984	Canola	plasma membrane, vacuole	35.67	39.36
Bra014886.1-P	Field mustard	extracellular	35.32	39.35
Bra038798.1-P	Field mustard	vacuole	36.18	39.33
Solyc02g069690.1.1	Tomato	golgi, vacuole	36.69	39.31
PGSC0003DMT400054386	Potato	vacuole	35.67	39.29
Bra013472.1-P	Field mustard	extracellular, vacuole	35.32	39.28
CDY49803	Canola	vacuole	35.49	39.25
KRH36766	Soybean	vacuole	35.67	39.21
CDY09546	Canola	extracellular, vacuole	35.84	39.18
KRH11827	Soybean	vacuole	35.84	39.11
CDX82774	Canola	extracellular, vacuole	35.15	39.09
CDY68914	Canola	golgi, plastid	28.84	39.03
Solyc02g022850.1.1	Tomato	vacuole	36.01	39.0
KRH11841	Soybean	vacuole	37.2	39.0
Bra013476.1-P	Field mustard	cytosol, plastid	35.84	38.96
AT2G34790.1	Thale cress	golgi, vacuole	35.32	38.91
Bra027547.1-P	Field mustard	vacuole	35.84	38.89
CDY13105	Canola	vacuole	35.84	38.89
Solyc02g070170.1.1	Tomato	extracellular, vacuole	35.49	38.88
Bra016272.1-P	Field mustard	peroxisome, plasma membrane, plastid	22.35	38.87
KRH41927	Soybean	nucleus	35.15	38.87
KRH36843	Soybean	vacuole	35.32	38.84
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	33.96	38.79
CDX94009	Canola	vacuole	35.67	38.78
AT1G30760.2	Thale cress	golgi	36.52	38.77
CDX94008	Canola	golgi	35.32	38.69
AT1G26390.1	Thale cress	vacuole	34.98	38.68
PGSC0003DMT400054564	Potato	cytosol, plastid	32.59	38.66
AT4G20800.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	34.81	38.64
KRH41928	Soybean	vacuole	34.98	38.61
PGSC0003DMT400046308	Potato	extracellular	35.84	38.6
CDY50728	Canola	extracellular, vacuole	34.64	38.59
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	36.35	38.59
CDY67309	Canola	endoplasmic reticulum, plasma membrane	35.15	38.58
CDX98675	Canola	golgi	35.15	38.5
CDY69093	Canola	vacuole	35.15	38.5
CDX77574	Canola	cytosol	26.28	38.5
Bra021930.1-P	Field mustard	plasma membrane	32.94	38.45
KRH49946	Soybean	extracellular, vacuole	27.82	38.44
AT1G30740.2	Thale cress	vacuole	35.15	38.43
Zm00001d049536_P001	Maize	vacuole	35.67	38.42
Bra013473.1-P	Field mustard	vacuole	34.47	38.4
CDX79005	Canola	vacuole	34.47	38.4
CDX77568	Canola	endoplasmic reticulum, plasma membrane	34.98	38.39
AT5G44400.1	Thale cress	golgi, vacuole	35.15	38.36
CDY29122	Canola	cytosol	12.63	38.34
AT1G26400.1	Thale cress	golgi, vacuole	34.47	38.33
AT1G30720.1	Thale cress	vacuole	34.47	38.33
VIT_10s0003g05450.t01	Wine grape	extracellular	37.54	38.33
CDY29117	Canola	vacuole	34.98	38.32
PGSC0003DMT400057528	Potato	extracellular	35.15	38.29
KRH36851	Soybean	vacuole	36.86	38.23
Solyc02g070070.1.1	Tomato	extracellular	34.64	38.23
Bra038799.1-P	Field mustard	golgi	34.81	38.13
KRH36842	Soybean	vacuole	34.64	38.09
AT1G11770.1	Thale cress	vacuole	34.81	38.06
Bra006964.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.81	38.06
AT4G20840.1	Thale cress	plasma membrane	34.98	38.03
KRH42272	Soybean	vacuole	34.98	38.03
Bra014890.1-P	Field mustard	plasma membrane	34.64	38.02
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	34.64	38.02
AT1G26420.1	Thale cress	vacuole	34.3	38.0
CDX94785	Canola	vacuole	34.81	37.99
AT1G34575.1	Thale cress	vacuole	34.13	37.95
CDY09547	Canola	extracellular, vacuole	34.13	37.95
AT1G01980.1	Thale cress	plasma membrane, vacuole	34.98	37.89
Solyc02g070200.1.1	Tomato	vacuole	34.98	37.89
Solyc09g072660.2.1	Tomato	extracellular	35.49	37.89
CDX82775	Canola	extracellular, vacuole	34.13	37.88
CDY71012	Canola	extracellular, vacuole	34.13	37.88
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	34.81	37.78
Bra023126.1-P	Field mustard	extracellular, vacuole	33.96	37.69
KRH36841	Soybean	vacuole	25.26	37.66
Bra033743.1-P	Field mustard	vacuole	34.47	37.62
CDY49011	Canola	vacuole	34.47	37.62
AT1G26380.1	Thale cress	endoplasmic reticulum	34.3	37.57
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	35.49	37.55
CDX82782	Canola	vacuole	36.52	37.54
CDX79582	Canola	mitochondrion	30.55	37.53
AT5G44440.2	Thale cress	golgi	38.57	37.48
AT1G30710.1	Thale cress	extracellular, plasma membrane, vacuole	33.96	37.48
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.21	37.47
Zm00001d024541_P001	Maize	vacuole	35.67	37.46
CDX79010	Canola	cytosol	17.06	37.45
CDX85019	Canola	extracellular	33.11	37.45
CDX67534	Canola	plasma membrane, vacuole	34.3	37.43
Solyc02g079440.1.1	Tomato	nucleus	34.3	37.36
KRH42276	Soybean	nucleus	37.71	37.27
Bra028530.1-P	Field mustard	plasma membrane, vacuole	34.13	37.24
Solyc02g079450.1.1	Tomato	extracellular	34.13	37.24
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	33.79	37.22
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	35.15	37.18
CDX79008	Canola	vacuole	36.01	37.15
KRH11826	Soybean	nucleus	34.47	37.13
Bra022992.1-P	Field mustard	mitochondrion	30.2	37.11
CDY70640	Canola	mitochondrion	30.2	37.11
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	33.96	37.06
KRH36840	Soybean	nucleus	34.64	37.04
KRH42271	Soybean	endoplasmic reticulum	36.35	36.92
CDY70679	Canola	cytosol, mitochondrion, peroxisome	14.68	36.91
CDY13353	Canola	plasma membrane	33.79	36.87
Bra024717.1-P	Field mustard	vacuole	33.11	36.81
CDY16156	Canola	vacuole	33.11	36.81
AT1G30730.1	Thale cress	extracellular	32.94	36.69
KRH12123	Soybean	plastid	28.67	36.68
KRH58395	Soybean	endoplasmic reticulum	36.01	36.25
CDY34627	Canola	vacuole	32.76	35.89
Bra014885.1-P	Field mustard	plasma membrane, vacuole	32.42	35.78
AT1G26410.1	Thale cress	golgi	33.62	35.69
PGSC0003DMT400012979	Potato	cytosol	24.23	35.68
Bra033739.1-P	Field mustard	plasma membrane, vacuole	36.86	35.53
AT5G44380.2	Thale cress	mitochondrion, plastid	35.15	35.46
AT4G20830.1	Thale cress	vacuole	34.47	35.44
CDX77576	Canola	plasma membrane, vacuole	32.08	35.4
CDY50727	Canola	plasma membrane, vacuole	32.08	35.4
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	32.42	35.25
Bra027553.1-P	Field mustard	vacuole	26.11	35.17
Bra031780.1-P	Field mustard	vacuole	32.25	35.13
CDY34829	Canola	vacuole	32.25	35.13
Zm00001d022215_P001	Maize	plastid	31.57	35.1
Bra005390.1-P	Field mustard	vacuole	32.25	35.06
CDY69038	Canola	vacuole	32.25	35.06
CDY52527	Canola	vacuole	32.42	35.06
Bra023123.1-P	Field mustard	plasma membrane, vacuole	30.55	34.96
CDY02318	Canola	plasma membrane, vacuole	30.55	34.96
KRH11830	Soybean	vacuole	29.35	34.96
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	32.94	34.28
AT2G34810.1	Thale cress	vacuole	31.57	34.26
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	32.76	34.22
CDX94786	Canola	vacuole	30.72	33.9
KRH71761	Soybean	mitochondrion, plastid, vacuole	24.06	33.18
CDX82780	Canola	cytosol	11.6	31.78
CDX85018	Canola	cytosol	35.32	30.9
KRG99206	Soybean	extracellular, peroxisome	20.31	29.46

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A1D6LTC1
ProteinID:AQK82663.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614
GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF19	SUPFAM:SSF56176	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0008431716	EnsemblPlantsGene:Zm00001d037009	EnsemblPlants:Zm00001d037009_P001	EnsemblPlants:Zm00001d037009_T001	SEG:seg

Description

FAD-binding Berberine family protein

Coordinates

chr6:+:108903771..108928531

Molecular Weight (calculated)

64137.3 Da

IEP (calculated)

9.792

GRAVY (calculated)

0.001

Length

586 amino acids

Sequence
(BLAST)

001: MVIRSFATTS LIAAFFAIAH LAAWVTPPQA AATAAPPSSP DTASFLRCLG AHLPPQAVYT NASRSYTSVL ESSIKNLLFV TPATPTPVAI VAASNASHVQ
101: AAVRCGARHG VGVRPRSGGH DYEGLSYRSL SARRPFAVVD LARLRAVSVD ARNRTAWVGS GATLGELYYA IASRSARLGF PGGVGPTVGV GGHLSGGGFG
201: LLLRKHGLAA DHVVDAVVVD AAGRLRDRAA MGEDLFWAIR GGGGGSFGVV LSWKLRLVRV PPVVAVSTVH RPRNQSASAL LARWQHVAPA LPRDAILRVV
301: LQNQDAQFES LYLGTCAGLV ATMARRFPEL GMEARDCIEM TWIQSVLYFA FYGTGQPTER LLDRGTKPER YFKGKSDYVT EPMPSHVWES AWSWLLKDGA
401: GLLILDPYGG RMRGVAPSAT PFPHRRALYN LQYYGFWFQN GTRATEKHVG WIRGLHREME PYVSKNPRGA YVNYRDLDLG VNHDDHRGLA SYEKARFVEG
501: KWLEWMDTEV KPQDGEGKLP TSMLFGPRII REKFTQLCSP EITTLLAAIP IIGYACILDI GWEWAGVMWI YNVVTFLPMD MFKLAI

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.