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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • peroxisome 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G44390.1 Thale cress vacuole 65.58 70.3
AT5G44400.1 Thale cress golgi, vacuole 64.89 70.2
CDY49011 Canola vacuole 63.51 68.72
CDX94785 Canola vacuole 63.17 68.34
Bra033743.1-P Field mustard vacuole 62.82 67.97
AT2G34790.1 Thale cress golgi, vacuole 52.5 57.33
AT1G30760.2 Thale cress golgi 51.81 54.53
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 36.49 47.32
AT1G30700.1 Thale cress vacuole 42.34 46.68
AT1G26390.1 Thale cress vacuole 41.82 45.85
AT1G30720.1 Thale cress vacuole 41.48 45.73
TraesCS1D01G443200.1 Wheat cytosol 24.78 45.57
AT1G26380.1 Thale cress endoplasmic reticulum 41.82 45.42
AT1G26400.1 Thale cress golgi, vacuole 40.96 45.16
AT1G30730.1 Thale cress extracellular 40.79 45.06
AT4G20820.1 Thale cress plastid 41.14 44.92
AT1G34575.1 Thale cress vacuole 40.62 44.78
AT1G26420.1 Thale cress vacuole 40.62 44.61
AT5G44410.1 Thale cress golgi 40.96 44.49
AT1G30710.1 Thale cress extracellular, plasma membrane, vacuole 40.62 44.44
AT4G20800.1 Thale cress endoplasmic reticulum, extracellular, vacuole 40.28 44.32
TraesCS7B01G026000.1 Wheat cytosol 25.3 44.28
TraesCS7A01G354100.1 Wheat vacuole 33.05 44.14
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 39.07 43.82
TraesCS2B01G017300.1 Wheat plastid 30.81 43.77
TraesCS2B01G172300.1 Wheat vacuole 39.76 43.67
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 31.15 43.61
AT4G20860.1 Thale cress vacuole 39.76 43.58
TraesCS2D01G151500.1 Wheat vacuole 39.59 43.48
AT1G11770.1 Thale cress vacuole 40.1 43.47
AT5G44360.2 Thale cress golgi 40.79 43.25
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 39.93 43.2
TraesCS1B01G456900.1 Wheat vacuole 37.01 43.17
TraesCS1B01G469800.1 Wheat vacuole 39.93 43.12
TraesCS1D01G338700.1 Wheat plasma membrane 39.76 43.1
KXG20146 Sorghum extracellular 39.41 42.96
TraesCS1D01G433600.1 Wheat vacuole 39.93 42.96
HORVU1Hr1G092680.1 Barley golgi, vacuole 39.59 42.91
TraesCS2A01G051500.1 Wheat peroxisome 25.13 42.82
HORVU7Hr1G089270.1 Barley vacuole 39.07 42.67
HORVU2Hr1G008270.1 Barley peroxisome 22.72 42.44
AT1G26410.1 Thale cress golgi 40.28 42.39
EER89910 Sorghum vacuole 38.55 42.34
AT1G01980.1 Thale cress plasma membrane, vacuole 39.41 42.33
TraesCS7A01G126600.1 Wheat vacuole 37.87 42.31
TraesCS7A01G353700.1 Wheat extracellular, vacuole 38.73 42.29
AT1G30740.2 Thale cress vacuole 38.9 42.16
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 37.69 42.12
AT4G20840.1 Thale cress plasma membrane 39.07 42.12
TraesCS2D01G006000.1 Wheat plastid 36.66 42.09
TraesCS7D01G369200.1 Wheat extracellular, vacuole 38.21 41.97
TraesCS1A01G424100.1 Wheat vacuole 36.83 41.96
HORVU2Hr1G013930.1 Barley golgi, vacuole 39.41 41.94
Zm00001d046318_P001 Maize vacuole 38.21 41.81
Zm00001d046322_P001 Maize extracellular 38.21 41.81
TraesCS2B01G066900.1 Wheat nucleus, unclear 37.87 41.75
TraesCS2A01G052800.1 Wheat plastid, vacuole 37.69 41.71
TraesCS5A01G261400.1 Wheat vacuole 37.69 41.71
Os06t0549300-00 Rice extracellular 37.52 41.68
TraesCS7D01G393900.1 Wheat vacuole 37.52 41.68
Os06t0548100-00 Rice golgi 38.38 41.68
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.87 41.67
HORVU2Hr1G000540.1 Barley golgi, vacuole 38.9 41.62
TraesCS7B01G273500.1 Wheat plastid 38.9 41.62
TraesCS7B01G273700.1 Wheat vacuole 37.18 41.54
TraesCS5D01G268800.1 Wheat vacuole 37.52 41.52
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 38.38 41.45
Os06t0549600-01 Rice extracellular 37.52 41.44
KXG20147 Sorghum vacuole 38.21 41.42
Zm00001d037005_P001 Maize vacuole 37.35 41.41
TraesCS7A01G400100.1 Wheat unclear 37.35 41.33
HORVU2Hr1G122590.1 Barley vacuole 38.04 41.31
TraesCS2B01G066800.1 Wheat vacuole 37.52 41.29
TraesCS7B01G273800.1 Wheat plasma membrane 37.01 41.27
Os06t0548200-01 Rice extracellular 37.87 41.2
TraesCS7D01G368800.1 Wheat vacuole 36.83 41.15
TraesCS7A01G353900.1 Wheat vacuole 36.66 41.04
TraesCS7D01G368700.1 Wheat unclear 36.49 41.01
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 16.87 41.0
TraesCS2A01G052600.1 Wheat vacuole 37.52 40.98
TraesCS7B01G273900.1 Wheat vacuole 36.66 40.96
HORVU7Hr1G089190.1 Barley vacuole 37.01 40.95
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 37.35 40.94
TraesCS2D01G052700.1 Wheat unclear 37.18 40.91
Zm00001d046319_P001 Maize vacuole 37.01 40.87
TraesCS7B01G273600.1 Wheat vacuole 36.32 40.81
TraesCS2D01G052300.1 Wheat plastid 37.01 40.8
TraesCS5B01G302700.1 Wheat vacuole 36.49 40.77
TraesCS7A01G353800.1 Wheat vacuole 36.49 40.77
TraesCS7D01G369000.1 Wheat extracellular, vacuole 36.49 40.77
TraesCS2B01G016900.1 Wheat vacuole 36.32 40.73
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 36.66 40.73
Os06t0549633-00 Rice vacuole 37.01 40.72
TraesCS7A01G354000.1 Wheat vacuole 36.14 40.62
AT2G34810.1 Thale cress vacuole 37.69 40.56
TraesCS2A01G052900.1 Wheat unclear 36.83 40.53
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 35.97 40.5
EER89907 Sorghum plasma membrane, vacuole 36.66 40.49
EER89909 Sorghum extracellular, plasma membrane, vacuole 36.66 40.49
TraesCS2A01G542600.1 Wheat vacuole 37.01 40.49
EER89908 Sorghum plasma membrane, vacuole 37.52 40.45
TraesCS4B01G104000.1 Wheat vacuole 37.87 40.44
TraesCSU01G034600.1 Wheat vacuole 35.8 40.39
HORVU7Hr1G093940.1 Barley vacuole 36.83 40.38
TraesCS4B01G358600.1 Wheat golgi 36.32 40.34
TraesCS4D01G101000.1 Wheat golgi 37.69 40.33
TraesCS5D01G309100.1 Wheat vacuole 36.14 40.31
HORVU2Hr1G008300.1 Barley plastid 36.49 40.3
KXG20949 Sorghum vacuole 37.52 40.3
EES13185 Sorghum vacuole 37.87 40.29
TraesCS4B01G391900.1 Wheat vacuole 35.46 40.23
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 36.14 40.23
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 36.14 40.23
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 15.15 40.18
AT4G20830.1 Thale cress vacuole 39.41 40.18
Zm00001d037008_P001 Maize golgi, vacuole 35.28 40.12
TraesCS4A01G212100.1 Wheat vacuole 37.35 40.04
TraesCS2A01G005700.1 Wheat vacuole 34.08 40.0
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 38.9 40.0
HORVU4Hr1G017270.1 Barley vacuole 37.35 39.96
KXG28418 Sorghum vacuole 36.32 39.96
TraesCS2B01G066400.1 Wheat plastid 36.32 39.96
Os06t0548800-01 Rice extracellular 36.49 39.92
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 35.28 39.88
TraesCS7D01G472000.1 Wheat vacuole 35.8 39.85
TraesCS2B01G572400.1 Wheat unclear 36.32 39.81
HORVU7Hr1G089160.3 Barley vacuole 35.97 39.81
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 36.14 39.77
Os06t0549900-01 Rice extracellular 35.97 39.58
Zm00001d049169_P001 Maize vacuole 35.97 39.58
TraesCS3A01G111600.1 Wheat vacuole 36.14 39.55
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 35.11 39.46
KXG26140 Sorghum plasma membrane 36.32 39.44
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 35.63 39.28
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 35.63 39.06
TraesCS4B01G222500.1 Wheat plasma membrane 37.87 38.87
TraesCS4D01G223000.1 Wheat plasma membrane 37.87 38.87
TraesCS2D01G543700.1 Wheat unclear 37.52 38.86
HORVU2Hr1G008310.1 Barley golgi, vacuole 36.14 38.67
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 29.09 38.58
TraesCS4A01G081300.1 Wheat unclear 37.52 38.58
AT5G44440.2 Thale cress golgi 39.93 38.47
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 38.04 38.04
TraesCS3B01G070000.1 Wheat mitochondrion 18.42 37.94
TraesCS2D01G052400.1 Wheat vacuole 26.16 37.81
TraesCS2B01G145300.1 Wheat plasma membrane 37.18 37.76
Os11t0495950-00 Rice plasma membrane, vacuole 34.94 37.59
Os02t0235900-01 Rice plasma membrane, vacuole 36.49 37.39
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 36.49 36.87
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 36.14 36.65
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 36.32 36.44
Zm00001d016199_P001 Maize mitochondrion 35.11 36.36
KXG29886 Sorghum mitochondrion 35.97 35.97
HORVU7Hr1G089210.1 Barley mitochondrion 37.69 35.67
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 35.63 35.63
TraesCS2D01G126400.1 Wheat golgi, vacuole 35.28 35.41
TraesCS2B01G145500.1 Wheat vacuole 35.28 35.22
Zm00001d037009_P001 Maize plasma membrane 35.46 35.15
KXG29885 Sorghum plastid 29.78 34.53
HORVU7Hr1G089260.1 Barley mitochondrion 26.51 31.69
HORVU7Hr1G026630.1 Barley plastid 27.54 31.56
Protein Annotations
Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1EntrezGene:834464UniProt:A0A1P8BCJ3
ProteinID:AED95103.1EMBL:AK220778EMBL:AK226516ProteinID:ANM69306.1ArrayExpress:AT5G44380EnsemblPlantsGene:AT5G44380
RefSeq:AT5G44380TAIR:AT5G44380RefSeq:AT5G44380-TAIR-GEnsemblPlants:AT5G44380.2EMBL:AY093127Unigene:At.19702
ProteinID:BAB10123.1InterPro:BBEInterPro:FAD-bd_2InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009506
GO:GO:0016491GO:GO:0016614GO:GO:0030312GO:GO:0050660GO:GO:0055114GO:GO:0071949
InterPro:IPR016166InterPro:IPR016167RefSeq:NP_001330998.1RefSeq:NP_199251.1ProteinID:OAO94701.1InterPro:Oxid_FAD_bind_N
PFAM:PF01565PFAM:PF08031PFscan:PS51387PANTHER:PTHR32448PANTHER:PTHR32448:SF38SUPFAM:SSF56176
UniParc:UPI0008484CCCSEG:seg::::
Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44380]
Coordinates
chr5:-:17878672..17881495
Molecular Weight (calculated)
65282.7 Da
IEP (calculated)
10.121
GRAVY (calculated)
-0.097
Length
581 amino acids
Sequence
(BLAST)
001: MNLVLTILYK YINTFSSLTL KRKKTQNSSI WLLSCIFAAR MGNSKPLPTI SCIIVSVLYF SFYCITPTSS SASIQDQFIN CVKRNTHVSF PLEKTLFTPA
101: KNVSLFNQVL ESTAQNLQFL AKSMPKPGFI FRPIHQSQVQ ASIICSKKLG IHFRVRSGGH DFEALSYVSR IEKPFILLDL SKLKQINVDI ESNSAWVQPG
201: ATLGELYYRI AEKSKIHGFP AGLCTSVGIG GYMTGGGYGT LMRKYGLAGD NVLDVKMVDA NGKLLDRAAM GEDLFWAIRG GGGASFGIVL AWKIKLVPVP
301: KTVTVFTVTK TLEQDARLKT ISKWQQISSK IIEEIHIRVV LRAAGNDGNK TVTMTYLGQF LGEKGTLLKV MEKAFPELGL TQKDCTEMSW IEAALFHGGF
401: PTGSPIEILL QLKSPLGKDY FKATSDFVKE PIPVIGLKGI FKRLIEGNTT FLNWTPYGGM MSKIPESAIP FPHRNGTLFK ILYYANWLEN DKTSSRKINW
501: IKEIYNYMAP YVSSNPRQAY VNYRDLDFGQ NKNNAKVNFI EAKIWGPKYF KGNFDRLVKI KTKVDPENFF RHEQSIPPMP Y
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.