Factsheet for AT1G30760.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 2
golgi 4
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70228	Canola	cytosol, golgi, peroxisome	51.99	93.18
CDX77568	Canola	endoplasmic reticulum, plasma membrane	88.77	91.76
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	88.59	91.57
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	88.59	91.57
Bra014890.1-P	Field mustard	plasma membrane	88.41	91.39
CDY67309	Canola	endoplasmic reticulum, plasma membrane	88.04	91.01
AT2G34790.1	Thale cress	golgi, vacuole	76.63	79.51
KRH42273	Soybean	nucleus	63.77	66.79
KRH36839	Soybean	nucleus	65.4	66.48
KRH58398	Soybean	plasma membrane, vacuole	63.22	65.72
KRH11824	Soybean	nucleus	64.49	65.56
KRH58399	Soybean	nucleus	61.59	63.67
VIT_10s0003g05420.t01	Wine grape	vacuole	61.05	62.52
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	60.14	62.17
Solyc02g070070.1.1	Tomato	extracellular	59.78	62.15
Solyc09g072660.2.1	Tomato	extracellular	60.87	61.2
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	61.23	61.01
KRH42274	Soybean	mitochondrion, nucleus	57.61	60.8
AT5G44400.1	Thale cress	golgi, vacuole	57.79	59.4
Solyc02g069690.1.1	Tomato	golgi, vacuole	58.7	59.23
PGSC0003DMT400089776	Potato	golgi, vacuole	58.51	59.05
KRH42276	Soybean	nucleus	62.68	58.35
AT5G44390.1	Thale cress	vacuole	56.52	57.56
AT5G44380.2	Thale cress	mitochondrion, plastid	54.53	51.81
KRG99206	Soybean	extracellular, peroxisome	34.6	47.28
TraesCS1D01G443200.1	Wheat	cytosol	26.99	47.15
AT1G30700.1	Thale cress	vacuole	44.75	46.87
AT1G26390.1	Thale cress	vacuole	44.93	46.79
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	37.86	46.65
AT1G26420.1	Thale cress	vacuole	44.2	46.12
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.3	46.12
TraesCS7B01G026000.1	Wheat	cytosol	27.72	46.08
AT4G20800.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	43.84	45.83
AT1G26380.1	Thale cress	endoplasmic reticulum	44.38	45.79
AT5G44360.2	Thale cress	golgi	45.29	45.62
KXG20146	Sorghum	extracellular	44.02	45.59
AT1G26400.1	Thale cress	golgi, vacuole	43.3	45.35
AT4G20820.1	Thale cress	plastid	43.66	45.3
Zm00001d046322_P001	Maize	extracellular	43.48	45.2
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.48	45.11
AT4G20860.1	Thale cress	vacuole	43.12	44.91
TraesCS2D01G151500.1	Wheat	vacuole	42.93	44.8
HORVU7Hr1G089270.1	Barley	vacuole	42.93	44.55
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.57	44.42
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	43.12	44.24
AT1G11770.1	Thale cress	vacuole	42.93	44.22
KXG20147	Sorghum	vacuole	42.93	44.22
Os06t0548200-01	Rice	extracellular	42.75	44.19
TraesCS2B01G172300.1	Wheat	vacuole	42.21	44.05
TraesCS1D01G338700.1	Wheat	plasma membrane	42.75	44.03
AT1G34575.1	Thale cress	vacuole	42.03	44.02
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	32.97	43.86
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.3	43.85
TraesCS1B01G456900.1	Wheat	vacuole	39.49	43.78
TraesCS1B01G469800.1	Wheat	vacuole	42.57	43.68
AT1G01980.1	Thale cress	plasma membrane, vacuole	42.75	43.62
AT4G20840.1	Thale cress	plasma membrane	42.57	43.6
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.39	43.58
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	40.76	43.44
Os06t0548100-00	Rice	golgi	42.03	43.36
AT1G30720.1	Thale cress	vacuole	41.3	43.26
AT1G30710.1	Thale cress	extracellular, plasma membrane, vacuole	41.49	43.13
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.85	43.1
AT2G34810.1	Thale cress	vacuole	42.03	42.96
TraesCS1D01G433600.1	Wheat	vacuole	42.03	42.96
TraesCS1A01G424100.1	Wheat	vacuole	39.67	42.94
AT5G44410.1	Thale cress	golgi	41.49	42.8
AT1G26410.1	Thale cress	golgi	42.75	42.75
TraesCS7B01G273600.1	Wheat	vacuole	40.04	42.75
AT1G30740.2	Thale cress	vacuole	41.49	42.72
TraesCS7A01G126600.1	Wheat	vacuole	40.22	42.69
TraesCS7B01G273700.1	Wheat	vacuole	40.22	42.69
Zm00001d037005_P001	Maize	vacuole	40.4	42.56
TraesCS5D01G268800.1	Wheat	vacuole	40.4	42.48
HORVU2Hr1G008270.1	Barley	peroxisome	23.91	42.44
TraesCS7D01G368700.1	Wheat	unclear	39.67	42.36
TraesCS7D01G368800.1	Wheat	vacuole	39.86	42.31
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	43.3	42.3
TraesCS5A01G261400.1	Wheat	vacuole	40.22	42.29
TraesCS7A01G353900.1	Wheat	vacuole	39.67	42.2
TraesCS7A01G354000.1	Wheat	vacuole	39.49	42.17
EER89910	Sorghum	vacuole	40.22	41.97
TraesCS2A01G051500.1	Wheat	peroxisome	25.91	41.94
TraesCS2D01G006000.1	Wheat	plastid	38.41	41.9
Zm00001d037008_P001	Maize	golgi, vacuole	38.77	41.88
TraesCS7A01G354100.1	Wheat	vacuole	32.97	41.84
AT1G30730.1	Thale cress	extracellular	39.86	41.83
TraesCS2B01G017300.1	Wheat	plastid	30.98	41.81
TraesCS7B01G273500.1	Wheat	plastid	41.12	41.8
KXG20949	Sorghum	vacuole	40.94	41.77
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.94	41.62
Zm00001d046318_P001	Maize	vacuole	40.04	41.62
TraesCSU01G034600.1	Wheat	vacuole	38.77	41.55
TraesCS4B01G391900.1	Wheat	vacuole	38.41	41.41
EER89908	Sorghum	plasma membrane, vacuole	40.4	41.37
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	38.59	41.28
TraesCS2A01G052600.1	Wheat	vacuole	39.67	41.17
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.49	41.13
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.13	41.06
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.13	40.99
Os06t0549300-00	Rice	extracellular	38.77	40.92
TraesCS2B01G066900.1	Wheat	nucleus, unclear	38.95	40.8
HORVU7Hr1G089160.3	Barley	vacuole	38.77	40.76
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.13	40.75
KXG26140	Sorghum	plasma membrane	39.49	40.75
TraesCS2B01G016900.1	Wheat	vacuole	38.22	40.73
Os06t0549900-01	Rice	extracellular	38.95	40.72
EER89907	Sorghum	plasma membrane, vacuole	38.77	40.68
Os06t0549600-01	Rice	extracellular	38.77	40.68
Zm00001d046319_P001	Maize	vacuole	38.77	40.68
TraesCS2D01G052300.1	Wheat	plastid	38.77	40.61
TraesCS5B01G302700.1	Wheat	vacuole	38.22	40.58
HORVU2Hr1G122590.1	Barley	vacuole	39.31	40.56
TraesCS2A01G052900.1	Wheat	unclear	38.77	40.53
TraesCS2D01G052700.1	Wheat	unclear	38.77	40.53
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.77	40.53
Zm00001d049169_P001	Maize	vacuole	38.77	40.53
AT4G20830.1	Thale cress	vacuole	41.85	40.53
TraesCS3A01G111600.1	Wheat	vacuole	38.95	40.49
EES13185	Sorghum	vacuole	40.04	40.48
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	37.68	40.47
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	37.86	40.43
KXG28418	Sorghum	vacuole	38.59	40.34
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.59	40.34
HORVU2Hr1G008300.1	Barley	plastid	38.41	40.3
Os11t0495950-00	Rice	plasma membrane, vacuole	39.31	40.19
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	38.04	40.15
TraesCS5D01G309100.1	Wheat	vacuole	37.86	40.12
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.67	40.11
TraesCS7D01G393900.1	Wheat	vacuole	37.86	39.96
TraesCS2A01G542600.1	Wheat	vacuole	38.41	39.92
TraesCS7B01G273800.1	Wheat	plasma membrane	37.68	39.92
TraesCS2A01G052800.1	Wheat	plastid, vacuole	37.86	39.81
TraesCS7A01G400100.1	Wheat	unclear	37.86	39.81
TraesCS2B01G066400.1	Wheat	plastid	38.04	39.77
TraesCS2B01G066800.1	Wheat	vacuole	38.04	39.77
TraesCS4B01G358600.1	Wheat	golgi	37.68	39.77
TraesCS3B01G070000.1	Wheat	mitochondrion	20.29	39.72
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	37.5	39.66
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	37.32	39.46
TraesCS7A01G353800.1	Wheat	vacuole	37.14	39.42
Os06t0549633-00	Rice	vacuole	37.68	39.39
Os06t0548800-01	Rice	extracellular	37.86	39.36
TraesCS7D01G472000.1	Wheat	vacuole	37.14	39.27
HORVU7Hr1G089190.1	Barley	vacuole	37.32	39.24
TraesCS2B01G572400.1	Wheat	unclear	37.5	39.06
TraesCS2D01G052400.1	Wheat	vacuole	28.44	39.05
TraesCS7B01G273900.1	Wheat	vacuole	36.78	39.04
TraesCS2A01G005700.1	Wheat	vacuole	34.96	38.99
HORVU7Hr1G093940.1	Barley	vacuole	37.32	38.87
HORVU4Hr1G017270.1	Barley	vacuole	38.22	38.86
TraesCS4D01G101000.1	Wheat	golgi	38.22	38.86
TraesCS4A01G212100.1	Wheat	vacuole	38.04	38.75
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	36.41	38.65
TraesCS4B01G104000.1	Wheat	vacuole	38.04	38.6
TraesCS4D01G223000.1	Wheat	plasma membrane	39.49	38.52
Os02t0235900-01	Rice	plasma membrane, vacuole	39.49	38.45
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.04	38.43
TraesCS4A01G081300.1	Wheat	unclear	39.31	38.41
KXG29886	Sorghum	mitochondrion	40.4	38.38
TraesCS4B01G222500.1	Wheat	plasma membrane	39.31	38.34
Zm00001d016199_P001	Maize	mitochondrion	38.77	38.15
TraesCS2B01G145300.1	Wheat	plasma membrane	39.49	38.11
HORVU2Hr1G008310.1	Barley	golgi, vacuole	37.32	37.94
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	39.13	37.7
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.89	37.67
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	16.3	37.66
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	39.31	37.48
TraesCS2D01G126400.1	Wheat	golgi, vacuole	38.95	37.13
TraesCS2B01G145500.1	Wheat	vacuole	39.13	37.11
AT5G44440.2	Thale cress	golgi	40.4	36.98
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.77	36.83
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	38.77	36.83
Zm00001d037009_P001	Maize	plasma membrane	38.77	36.52
TraesCS2D01G543700.1	Wheat	unclear	36.96	36.36
KXG29885	Sorghum	plastid	32.97	36.33
HORVU7Hr1G089210.1	Barley	mitochondrion	37.86	34.04
HORVU7Hr1G026630.1	Barley	plastid	29.53	32.15
HORVU7Hr1G089260.1	Barley	mitochondrion	27.17	30.86

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EntrezGene:839958	UniProt:A0A1P8AT94
ProteinID:AAD25763.1	ProteinID:AAD32926.1	ProteinID:AEE31270.1	ProteinID:ANM59869.1	ArrayExpress:AT1G30760	EnsemblPlantsGene:AT1G30760
RefSeq:AT1G30760	TAIR:AT1G30760	RefSeq:AT1G30760-TAIR-G	EnsemblPlants:AT1G30760.2	EMBL:AY057687	Unigene:At.17084
InterPro:BBE	EMBL:BT004513	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0030312
GO:GO:0045551	GO:GO:0050268	GO:GO:0050660	GO:GO:0052747	GO:GO:0055114	GO:GO:0071949
InterPro:IPR016166	InterPro:IPR016167	RefSeq:NP_001319117.1	RefSeq:NP_174363.2	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	TMHMM:TMhelix
UniParc:UPI00084843FB	SEG:seg	:	:	:	:

Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]

Coordinates

chr1:+:10918267..10920677

Molecular Weight (calculated)

62342.1 Da

IEP (calculated)

7.389

GRAVY (calculated)

-0.235

Length

552 amino acids

Sequence
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.