CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	100.0	100.0
CDY70228	Canola	cytosol, golgi, peroxisome	56.55	98.05
CDX77568	Canola	endoplasmic reticulum, plasma membrane	92.88	92.88
CDY67309	Canola	endoplasmic reticulum, plasma membrane	92.88	92.88
AT1G30760.2	Thale cress	golgi	91.57	88.59
CDY43653	Canola	golgi	48.13	84.26
CDY70679	Canola	cytosol, mitochondrion, peroxisome	35.77	81.97
CDX84280	Canola	plasma membrane	76.59	80.35
CDY31642	Canola	plasma membrane	75.66	79.37
KRH42273	Soybean	nucleus	65.92	66.79
KRH36839	Soybean	nucleus	67.23	66.11
KRH11824	Soybean	nucleus	67.04	65.93
KRH58398	Soybean	plasma membrane, vacuole	65.54	65.91
KRH58399	Soybean	nucleus	64.04	64.04
CDY29118	Canola	cytosol, peroxisome, plastid	45.13	61.79
VIT_10s0003g05420.t01	Wine grape	vacuole	62.36	61.78
Solyc09g072660.2.1	Tomato	extracellular	63.3	61.57
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	61.24	61.24
Solyc02g070070.1.1	Tomato	extracellular	60.86	61.21
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	63.48	61.19
CDY69093	Canola	vacuole	60.86	60.75
CDY29117	Canola	vacuole	60.67	60.56
KRH42274	Soybean	mitochondrion, nucleus	58.8	60.04
CDY29122	Canola	cytosol	21.16	58.55
CDY13105	Canola	vacuole	58.99	58.33
Solyc02g069690.1.1	Tomato	golgi, vacuole	59.74	58.32
PGSC0003DMT400089776	Potato	golgi, vacuole	59.55	58.14
KRH42276	Soybean	nucleus	64.04	57.67
CDY49007	Canola	vacuole	58.24	57.49
CDX94780	Canola	plasma membrane, vacuole	58.43	57.46
CDY49011	Canola	vacuole	54.68	54.38
CDX94786	Canola	vacuole	53.93	54.24
CDX94785	Canola	vacuole	54.49	54.19
CDY66956	Canola	peroxisome, plasma membrane, plastid	40.82	51.78
CDY59834	Canola	peroxisome, plasma membrane, plastid	42.51	50.56
CDY16155	Canola	endoplasmic reticulum, extracellular, vacuole	47.38	48.65
TraesCS7B01G026000.1	Wheat	cytosol	29.96	48.19
CDY68515	Canola	extracellular, plasma membrane	34.27	48.16
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	40.26	47.99
CDY72595	Canola	extracellular, vacuole	34.08	47.89
CDX77574	Canola	cytosol	35.77	47.75
TraesCS1D01G443200.1	Wheat	cytosol	27.9	47.15
CDX85019	Canola	extracellular	45.69	47.1
CDX79005	Canola	vacuole	46.07	46.77
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	19.1	46.58
KRG99206	Soybean	extracellular, peroxisome	35.21	46.53
CDY16156	Canola	vacuole	45.69	46.3
CDX82775	Canola	extracellular, vacuole	45.69	46.21
CDX79004	Canola	extracellular, vacuole	45.32	45.92
CDX67534	Canola	plasma membrane, vacuole	46.07	45.81
CDX82774	Canola	extracellular, vacuole	45.13	45.73
CDX94788	Canola	vacuole	45.88	45.71
KXG20146	Sorghum	extracellular	45.51	45.59
Zm00001d046322_P001	Maize	extracellular	45.13	45.39
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	44.19	45.38
CDX79582	Canola	mitochondrion	40.45	45.28
CDY70640	Canola	mitochondrion	40.45	45.28
TraesCS2D01G151500.1	Wheat	vacuole	44.76	45.18
CDY13353	Canola	plasma membrane	45.32	45.07
CDX79007	Canola	golgi, vacuole	45.13	45.05
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	43.63	44.98
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	45.13	44.8
CDY49803	Canola	vacuole	44.38	44.72
CDY50728	Canola	extracellular, vacuole	44.01	44.68
CDX97984	Canola	plasma membrane, vacuole	44.38	44.63
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	44.19	44.61
Zm00001d037005_P001	Maize	vacuole	43.63	44.47
TraesCS2B01G172300.1	Wheat	vacuole	44.01	44.42
TraesCS7A01G126600.1	Wheat	vacuole	43.26	44.42
TraesCS1D01G338700.1	Wheat	plasma membrane	44.57	44.4
CDX82776	Canola	endoplasmic reticulum, vacuole	44.38	44.38
Os06t0548200-01	Rice	extracellular	44.19	44.19
TraesCS1B01G456900.1	Wheat	vacuole	41.2	44.18
CDY69038	Canola	vacuole	44.57	44.16
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	34.27	44.1
TraesCS1B01G469800.1	Wheat	vacuole	44.38	44.05
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.19	43.95
CDY02318	Canola	plasma membrane, vacuole	42.13	43.95
CDY34627	Canola	vacuole	44.01	43.93
Os06t0548100-00	Rice	golgi	43.82	43.74
TraesCS1A01G424100.1	Wheat	vacuole	41.76	43.73
CDY50727	Canola	plasma membrane, vacuole	43.45	43.69
HORVU1Hr1G092680.1	Barley	golgi, vacuole	43.82	43.66
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.45	43.61
CDX94009	Canola	vacuole	44.01	43.6
CDX79034	Canola	plastid	42.51	43.57
TraesCS1D01G433600.1	Wheat	vacuole	44.01	43.52
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	42.51	43.49
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	42.51	43.49
KXG20147	Sorghum	vacuole	43.63	43.47
HORVU7Hr1G089270.1	Barley	vacuole	43.26	43.42
CDX98676	Canola	vacuole	43.82	43.41
CDY52527	Canola	vacuole	44.01	43.36
CDX77576	Canola	plasma membrane, vacuole	43.07	43.31
TraesCS7B01G273700.1	Wheat	vacuole	42.13	43.27
TraesCS7A01G353900.1	Wheat	vacuole	41.95	43.16
TraesCS7B01G273600.1	Wheat	vacuole	41.76	43.13
CDY31432	Canola	vacuole	42.88	43.13
Zm00001d046318_P001	Maize	vacuole	42.88	43.13
CDY34829	Canola	vacuole	43.45	43.12
CDX82800	Canola	extracellular	42.13	43.1
EER89910	Sorghum	vacuole	42.7	43.1
TraesCS2D01G006000.1	Wheat	plastid	40.82	43.08
CDX79010	Canola	cytosol	21.54	43.07
CDX76449	Canola	vacuole	42.88	43.05
CDX82780	Canola	cytosol	17.23	42.99
TraesCS7A01G354100.1	Wheat	vacuole	35.02	42.99
CDY13104	Canola	extracellular, vacuole	42.88	42.96
CDY29116	Canola	extracellular, vacuole	42.88	42.96
CDY68914	Canola	golgi, plastid	34.83	42.96
TraesCS7B01G273500.1	Wheat	plastid	43.63	42.91
KXG20949	Sorghum	vacuole	43.45	42.88
HORVU2Hr1G008270.1	Barley	peroxisome	24.91	42.77
TraesCS7D01G368700.1	Wheat	unclear	41.39	42.75
TraesCS7D01G368800.1	Wheat	vacuole	41.57	42.69
TraesCS5A01G261400.1	Wheat	vacuole	41.95	42.67
TraesCS2B01G017300.1	Wheat	plastid	32.58	42.54
TraesCS2A01G051500.1	Wheat	peroxisome	27.15	42.52
CDY09547	Canola	extracellular, vacuole	41.95	42.5
TraesCS5D01G268800.1	Wheat	vacuole	41.76	42.48
CDY71012	Canola	extracellular, vacuole	41.95	42.42
TraesCS4B01G391900.1	Wheat	vacuole	40.64	42.38
HORVU2Hr1G000540.1	Barley	golgi, vacuole	43.07	42.36
TraesCS7A01G354000.1	Wheat	vacuole	40.82	42.17
TraesCSU01G034600.1	Wheat	vacuole	40.64	42.14
EER89908	Sorghum	plasma membrane, vacuole	42.51	42.12
TraesCS2B01G016900.1	Wheat	vacuole	40.82	42.08
Zm00001d037008_P001	Maize	golgi, vacuole	40.26	42.07
Os06t0549900-01	Rice	extracellular	41.57	42.05
EER89909	Sorghum	extracellular, plasma membrane, vacuole	41.39	42.02
CDY09546	Canola	extracellular, vacuole	42.13	41.98
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	40.45	41.86
CDX94008	Canola	golgi	41.76	41.68
CDX98675	Canola	golgi	41.76	41.68
HORVU2Hr1G122590.1	Barley	vacuole	41.76	41.68
Os06t0549600-01	Rice	extracellular	41.01	41.63
CDY02321	Canola	extracellular, vacuole	41.76	41.6
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.2	41.51
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	43.82	41.42
TraesCS2B01G066900.1	Wheat	nucleus, unclear	40.82	41.37
TraesCS2A01G052600.1	Wheat	vacuole	41.2	41.35
EER89907	Sorghum	plasma membrane, vacuole	40.64	41.25
TraesCS5B01G302700.1	Wheat	vacuole	40.07	41.15
HORVU7Hr1G089160.3	Barley	vacuole	40.45	41.14
TraesCS3B01G070000.1	Wheat	mitochondrion	21.72	41.13
TraesCS2D01G052700.1	Wheat	unclear	40.64	41.1
Zm00001d046319_P001	Maize	vacuole	40.45	41.06
Os06t0548800-01	Rice	extracellular	40.82	41.05
EES13185	Sorghum	vacuole	41.95	41.03
HORVU2Hr1G013930.1	Barley	golgi, vacuole	41.95	41.03
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	40.45	40.99
KXG26140	Sorghum	plasma membrane	41.01	40.93
Os06t0549300-00	Rice	extracellular	40.07	40.92
TraesCS2A01G542600.1	Wheat	vacuole	40.64	40.87
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	39.51	40.81
TraesCS2D01G052300.1	Wheat	plastid	40.26	40.8
TraesCS7D01G393900.1	Wheat	vacuole	39.89	40.73
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.26	40.72
TraesCS5D01G309100.1	Wheat	vacuole	39.7	40.69
TraesCS7B01G273800.1	Wheat	plasma membrane	39.7	40.69
HORVU2Hr1G008300.1	Barley	plastid	40.07	40.68
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	39.14	40.66
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.7	40.61
TraesCS7A01G400100.1	Wheat	unclear	39.89	40.57
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	40.26	40.57
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	39.7	40.54
Os06t0549633-00	Rice	vacuole	40.07	40.53
TraesCS3A01G111600.1	Wheat	vacuole	40.26	40.49
TraesCS2A01G005700.1	Wheat	vacuole	37.45	40.4
TraesCS7A01G353800.1	Wheat	vacuole	39.33	40.38
Os11t0495950-00	Rice	plasma membrane, vacuole	40.82	40.37
TraesCS2A01G052900.1	Wheat	unclear	39.89	40.34
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	39.89	40.34
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.33	40.23
HORVU7Hr1G089190.1	Barley	vacuole	39.51	40.19
TraesCS2A01G052800.1	Wheat	plastid, vacuole	39.51	40.19
TraesCS4B01G358600.1	Wheat	golgi	39.33	40.15
TraesCS2B01G066800.1	Wheat	vacuole	39.7	40.15
CDX79008	Canola	vacuole	42.7	40.14
TraesCS7D01G472000.1	Wheat	vacuole	39.14	40.04
CDX82782	Canola	vacuole	42.7	40.0
TraesCS7B01G273900.1	Wheat	vacuole	38.95	40.0
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	38.95	40.0
TraesCS2B01G066400.1	Wheat	plastid	39.51	39.96
TraesCS2B01G145300.1	Wheat	plasma membrane	42.7	39.86
TraesCS2B01G572400.1	Wheat	unclear	39.51	39.81
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	42.7	39.65
HORVU7Hr1G093940.1	Barley	vacuole	39.33	39.62
Zm00001d049169_P001	Maize	vacuole	39.14	39.58
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	42.13	39.27
HORVU4Hr1G017270.1	Barley	vacuole	39.7	39.04
TraesCS4D01G101000.1	Wheat	golgi	39.7	39.04
KXG28418	Sorghum	vacuole	38.58	39.02
Os02t0235900-01	Rice	plasma membrane, vacuole	41.39	38.98
TraesCS4B01G104000.1	Wheat	vacuole	39.7	38.97
TraesCS4A01G212100.1	Wheat	vacuole	39.51	38.93
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.42	38.91
TraesCS4B01G222500.1	Wheat	plasma membrane	41.2	38.87
TraesCS4D01G223000.1	Wheat	plasma membrane	41.2	38.87
TraesCS4A01G081300.1	Wheat	unclear	41.01	38.76
KXG29886	Sorghum	mitochondrion	42.13	38.73
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.95	38.69
HORVU2Hr1G008310.1	Barley	golgi, vacuole	39.14	38.49
Zm00001d016199_P001	Maize	mitochondrion	40.26	38.32
TraesCS2D01G052400.1	Wheat	vacuole	28.84	38.31
TraesCS2D01G126400.1	Wheat	golgi, vacuole	41.01	37.82
TraesCS2B01G145500.1	Wheat	vacuole	41.2	37.8
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	41.01	37.69
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	30.9	37.67
CDX85018	Canola	cytosol	47.19	37.61
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.64	37.35
TraesCS2D01G543700.1	Wheat	unclear	38.95	37.08
KXG29885	Sorghum	plastid	34.27	36.53
Zm00001d037009_P001	Maize	plasma membrane	39.51	36.01
HORVU7Hr1G089210.1	Barley	mitochondrion	40.07	34.85
HORVU7Hr1G026630.1	Barley	plastid	32.02	33.73
HORVU7Hr1G089260.1	Barley	mitochondrion	28.46	31.28

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	GO:A0A078EM83	InterPro:BBE
EnsemblPlants:CDY02326	ProteinID:CDY02326	ProteinID:CDY02326.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00113797001	InterPro:IPR016166
InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448
PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025424DB	SEG:seg

Description

BnaA09g25760D

Coordinates

chrLK031933:+:522736..525249

Molecular Weight (calculated)

59953.1 Da

IEP (calculated)

6.914

GRAVY (calculated)

-0.210

Length

534 amino acids

Sequence
(BLAST)

001: MASAIITDAN AFLVALLLLS LSHIPFSSST IQQDFVMCLV DNSDASFPMD SSFFTRDLNA SSYKMALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: ACAKKLQLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RHINVDLESN TAWVHAGASI GEVYYRIQEK SKVHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPETV TVFTVTKTLE QDGTRILYKW QQVADKLDED LFIRAIIQPA
301: SKTPKSKERT ISVSYQGQFL GDVNRLMQVM QRSFPQLGLM KKDCVETSWI KSVMYIAGFP STAPPEALLD GKSLFKNYFK AKSDYVEEAI PIEGLEGLWK
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLYKIQ WLTLWQDGKA SEAKHMEWMR DMYSYMEQYV SKNPRAAYVN YRDLDLGMNG KGSDAREWGN
501: KYFKGNFERL VKIKAKFDPE NFFRHEQSIP TGLE

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.