CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79007	Canola	golgi, vacuole	95.51	95.33
AT4G20820.1	Thale cress	plastid	86.7	87.03
CDX94788	Canola	vacuole	64.04	63.81
CDY13104	Canola	extracellular, vacuole	61.61	61.73
CDY29116	Canola	extracellular, vacuole	61.24	61.35
TraesCS7A01G354100.1	Wheat	vacuole	39.7	48.74
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	40.07	47.77
CDY72595	Canola	extracellular, vacuole	33.52	47.11
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	45.51	46.91
CDY68515	Canola	extracellular, plasma membrane	33.33	46.84
CDY66956	Canola	peroxisome, plasma membrane, plastid	36.52	46.32
TraesCS1D01G443200.1	Wheat	cytosol	27.34	46.2
TraesCS2B01G172300.1	Wheat	vacuole	45.69	46.12
TraesCS1B01G456900.1	Wheat	vacuole	42.88	45.98
CDY29118	Canola	cytosol, peroxisome, plastid	33.52	45.9
HORVU1Hr1G092680.1	Barley	golgi, vacuole	46.07	45.9
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.07	45.81
TraesCS2D01G151500.1	Wheat	vacuole	45.32	45.75
CDY43653	Canola	golgi	26.03	45.57
EER89910	Sorghum	vacuole	45.13	45.56
TraesCS1D01G433600.1	Wheat	vacuole	46.07	45.56
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	35.39	45.54
TraesCS1B01G469800.1	Wheat	vacuole	45.88	45.54
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	45.32	45.49
CDY70228	Canola	cytosol, golgi, peroxisome	26.22	45.45
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	44.94	45.37
TraesCS1D01G338700.1	Wheat	plasma membrane	45.51	45.34
HORVU7Hr1G089270.1	Barley	vacuole	45.13	45.3
TraesCS1A01G424100.1	Wheat	vacuole	43.26	45.29
Os06t0548100-00	Rice	golgi	45.32	45.23
Os06t0549900-01	Rice	extracellular	44.57	45.08
Zm00001d046318_P001	Maize	vacuole	44.76	45.01
CDY59834	Canola	peroxisome, plasma membrane, plastid	37.83	44.99
Zm00001d037005_P001	Maize	vacuole	44.01	44.85
KXG20146	Sorghum	extracellular	44.76	44.84
CDX84280	Canola	plasma membrane	42.7	44.79
CDY31642	Canola	plasma membrane	42.51	44.6
CDX77574	Canola	cytosol	33.33	44.5
TraesCS2B01G017300.1	Wheat	plastid	34.08	44.5
Zm00001d046322_P001	Maize	extracellular	44.19	44.44
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	43.26	44.42
KXG20147	Sorghum	vacuole	44.57	44.4
TraesCS7B01G273500.1	Wheat	plastid	45.13	44.38
CDX77568	Canola	endoplasmic reticulum, plasma membrane	44.38	44.38
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.38	44.38
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	44.57	44.24
TraesCS7A01G126600.1	Wheat	vacuole	43.07	44.23
CDX79010	Canola	cytosol	22.1	44.19
TraesCS5D01G268800.1	Wheat	vacuole	43.45	44.19
KXG26140	Sorghum	plasma membrane	44.19	44.11
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	43.07	44.06
EER89909	Sorghum	extracellular, plasma membrane, vacuole	43.26	43.92
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	42.88	43.87
CDY67309	Canola	endoplasmic reticulum, plasma membrane	43.82	43.82
Os06t0548200-01	Rice	extracellular	43.82	43.82
TraesCS5A01G261400.1	Wheat	vacuole	43.07	43.81
CDX79034	Canola	plastid	42.7	43.76
TraesCS2D01G006000.1	Wheat	plastid	41.39	43.68
CDY13105	Canola	vacuole	44.01	43.52
CDX82800	Canola	extracellular	42.51	43.49
CDX94785	Canola	vacuole	43.63	43.39
CDY49011	Canola	vacuole	43.63	43.39
TraesCS7B01G026000.1	Wheat	cytosol	26.97	43.37
TraesCS7A01G354000.1	Wheat	vacuole	41.95	43.33
CDY50727	Canola	plasma membrane, vacuole	43.07	43.31
HORVU2Hr1G000540.1	Barley	golgi, vacuole	44.01	43.28
CDX79005	Canola	vacuole	42.51	43.16
CDX77576	Canola	plasma membrane, vacuole	42.88	43.13
TraesCS2B01G016900.1	Wheat	vacuole	41.76	43.05
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	45.51	43.01
CDY16155	Canola	endoplasmic reticulum, extracellular, vacuole	41.76	42.88
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	35.02	42.69
CDY69093	Canola	vacuole	42.7	42.62
CDY50728	Canola	extracellular, vacuole	41.95	42.59
Os06t0549600-01	Rice	extracellular	41.95	42.59
Os06t0548800-01	Rice	extracellular	42.32	42.56
TraesCS7B01G273600.1	Wheat	vacuole	41.2	42.55
TraesCS7D01G368700.1	Wheat	unclear	41.2	42.55
CDX94780	Canola	plasma membrane, vacuole	43.26	42.54
CDY49007	Canola	vacuole	43.07	42.51
KXG20949	Sorghum	vacuole	43.07	42.51
CDX94009	Canola	vacuole	42.88	42.49
CDX98676	Canola	vacuole	42.88	42.49
EER89908	Sorghum	plasma membrane, vacuole	42.88	42.49
CDX85019	Canola	extracellular	41.2	42.47
CDY29117	Canola	vacuole	42.51	42.43
CDX82775	Canola	extracellular, vacuole	41.95	42.42
CDY02318	Canola	plasma membrane, vacuole	40.64	42.38
TraesCS7B01G273700.1	Wheat	vacuole	41.2	42.31
Os06t0549300-00	Rice	extracellular	41.39	42.26
CDX94008	Canola	golgi	42.32	42.24
CDX98675	Canola	golgi	42.32	42.24
Os06t0549633-00	Rice	vacuole	41.76	42.23
EER89907	Sorghum	plasma membrane, vacuole	41.57	42.21
Zm00001d046319_P001	Maize	vacuole	41.57	42.21
EES13185	Sorghum	vacuole	43.07	42.12
CDY49803	Canola	vacuole	41.76	42.08
Zm00001d037008_P001	Maize	golgi, vacuole	40.26	42.07
CDY70679	Canola	cytosol, mitochondrion, peroxisome	18.35	42.06
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	40.64	42.05
CDY16156	Canola	vacuole	41.39	41.94
CDY70640	Canola	mitochondrion	37.45	41.93
TraesCS7A01G400100.1	Wheat	unclear	41.2	41.9
TraesCS7A01G353900.1	Wheat	vacuole	40.64	41.81
CDX97984	Canola	plasma membrane, vacuole	41.57	41.81
TraesCS2A01G542600.1	Wheat	vacuole	41.57	41.81
CDY68914	Canola	golgi, plastid	33.9	41.8
CDY09546	Canola	extracellular, vacuole	41.95	41.79
TraesCSU01G034600.1	Wheat	vacuole	40.26	41.75
CDX82774	Canola	extracellular, vacuole	41.2	41.75
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	40.82	41.68
TraesCS7D01G393900.1	Wheat	vacuole	40.82	41.68
CDY31432	Canola	vacuole	41.39	41.62
TraesCS4B01G391900.1	Wheat	vacuole	39.89	41.6
CDX76449	Canola	vacuole	41.39	41.54
TraesCS7D01G368800.1	Wheat	vacuole	40.45	41.54
CDX67534	Canola	plasma membrane, vacuole	41.76	41.53
TraesCS2B01G572400.1	Wheat	unclear	41.2	41.51
TraesCS5D01G309100.1	Wheat	vacuole	40.45	41.46
CDY29122	Canola	cytosol	14.98	41.45
CDY02321	Canola	extracellular, vacuole	41.57	41.42
TraesCS2A01G005700.1	Wheat	vacuole	38.39	41.41
CDX79004	Canola	extracellular, vacuole	40.82	41.37
HORVU7Hr1G089160.3	Barley	vacuole	40.64	41.33
HORVU2Hr1G122590.1	Barley	vacuole	41.39	41.31
TraesCS2B01G145300.1	Wheat	plasma membrane	44.19	41.26
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	40.26	41.19
CDY09547	Canola	extracellular, vacuole	40.64	41.18
CDY13353	Canola	plasma membrane	41.39	41.15
TraesCS2A01G052900.1	Wheat	unclear	40.64	41.1
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	16.85	41.1
CDX79582	Canola	mitochondrion	36.7	41.09
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	44.19	41.04
TraesCS7A01G353800.1	Wheat	vacuole	39.89	40.96
CDY71012	Canola	extracellular, vacuole	40.45	40.91
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.89	40.8
TraesCS7D01G472000.1	Wheat	vacuole	39.89	40.8
TraesCS5B01G302700.1	Wheat	vacuole	39.7	40.77
TraesCS4B01G358600.1	Wheat	golgi	39.89	40.73
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	39.33	40.62
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.51	40.58
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	43.45	40.49
TraesCS2D01G052300.1	Wheat	plastid	39.89	40.42
HORVU7Hr1G093940.1	Barley	vacuole	40.07	40.38
TraesCS7B01G273800.1	Wheat	plasma membrane	39.33	40.31
HORVU2Hr1G008300.1	Barley	plastid	39.7	40.3
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.7	40.23
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.89	40.19
CDY34627	Canola	vacuole	40.26	40.19
TraesCS2B01G066800.1	Wheat	vacuole	39.7	40.15
TraesCS3A01G111600.1	Wheat	vacuole	39.89	40.11
HORVU7Hr1G089190.1	Barley	vacuole	39.33	40.0
TraesCS2A01G052800.1	Wheat	plastid, vacuole	39.33	40.0
TraesCS7B01G273900.1	Wheat	vacuole	38.95	40.0
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	43.26	39.9
HORVU2Hr1G008270.1	Barley	peroxisome	23.22	39.87
TraesCS4A01G212100.1	Wheat	vacuole	40.45	39.85
CDY34829	Canola	vacuole	40.07	39.78
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.33	39.77
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	38.2	39.69
CDX79008	Canola	vacuole	42.13	39.61
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.26	39.59
TraesCS2A01G051500.1	Wheat	peroxisome	25.28	39.59
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	39.14	39.58
CDX82782	Canola	vacuole	42.13	39.47
TraesCS2A01G052600.1	Wheat	vacuole	39.33	39.47
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.14	39.43
HORVU2Hr1G013930.1	Barley	golgi, vacuole	40.26	39.38
HORVU4Hr1G017270.1	Barley	vacuole	39.89	39.23
TraesCS2B01G066400.1	Wheat	plastid	38.76	39.2
TraesCS2B01G066900.1	Wheat	nucleus, unclear	38.58	39.09
TraesCS4D01G101000.1	Wheat	golgi	39.7	39.04
TraesCS2D01G052700.1	Wheat	unclear	38.58	39.02
CDY69038	Canola	vacuole	39.33	38.96
TraesCS4B01G222500.1	Wheat	plasma membrane	41.2	38.87
TraesCS4D01G223000.1	Wheat	plasma membrane	41.2	38.87
TraesCS2D01G543700.1	Wheat	unclear	40.82	38.86
TraesCS2D01G052400.1	Wheat	vacuole	29.21	38.81
TraesCS4B01G104000.1	Wheat	vacuole	39.51	38.79
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	42.13	38.73
KXG28418	Sorghum	vacuole	38.2	38.64
TraesCS4A01G081300.1	Wheat	unclear	40.82	38.58
CDY52527	Canola	vacuole	39.14	38.56
Zm00001d049169_P001	Maize	vacuole	38.02	38.45
TraesCS3B01G070000.1	Wheat	mitochondrion	20.22	38.3
CDX94786	Canola	vacuole	38.02	38.23
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	41.57	38.21
Zm00001d037009_P001	Maize	plasma membrane	41.76	38.05
Os02t0235900-01	Rice	plasma membrane, vacuole	40.26	37.92
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	16.85	37.66
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.82	37.65
Zm00001d016199_P001	Maize	mitochondrion	39.51	37.61
TraesCS2B01G145500.1	Wheat	vacuole	40.82	37.46
Os11t0495950-00	Rice	plasma membrane, vacuole	37.83	37.41
KXG29886	Sorghum	mitochondrion	40.64	37.35
CDX82780	Canola	cytosol	14.61	36.45
HORVU7Hr1G089210.1	Barley	mitochondrion	40.26	35.02
KXG29885	Sorghum	plastid	32.02	34.13
CDX85018	Canola	cytosol	41.57	33.13
HORVU7Hr1G026630.1	Barley	plastid	30.71	32.35
HORVU7Hr1G089260.1	Barley	mitochondrion	29.03	31.89

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	GO:A0A078D057	InterPro:BBE
EnsemblPlants:CDX82776	ProteinID:CDX82776	ProteinID:CDX82776.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00138097001	InterPro:IPR016166
InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448
PANTHER:PTHR32448:SF30	SUPFAM:SSF56176	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE5B31	SEG:seg

Description

BnaC01g12260D

Coordinates

chrLK031830:+:105810..107414

Molecular Weight (calculated)

60437.5 Da

IEP (calculated)

8.134

GRAVY (calculated)

-0.205

Length

534 amino acids

Sequence
(BLAST)

001: MKLQTFFSTI LLFTTIFLLL SLPHSVSANQ SNHTGFLQCL SLRLNDSNIV SKVIHTPNDS SFSSVLSLTI QNPRFSSPGT PKPVLILTPV QPSHVQSAVK
101: CARRFGIHIR TRSGGHDYEG LSYATHKPFV ILDLTNLRSI TVDVDNRSVW VQTGATIGEL YYELGKKNRT LAFPAGVCPT VGVGGHFSGG GYGTLLRKHG
201: LAADHVIDAR VVDARGRVLE RREMGEEFFW AIRGGGGSSF CVVLSWKIGL VDVPSTVTVF NVTEFEEQSA LKIIHRWQFV SDRVSDELFV RVMLQRYKNM
301: VRASFPGLYL GSVKSLLELV NREFPELGLE EKDCKEMSWI ESVVWFAELG DVPIDNLGKR TRASLAFKAK SDFVQEPIPE NVISKMWRRL QAPEAEHAQL
401: IFTPFGGKMS EIGEYETPFP HREGNMYEIQ YLNYWRGGGG EEKEKYMRWV ERVYDEMSEF VARSPRGAYI NLRDLDLGIY VGGKRSKYEE GKSWGVKYFK
501: NNFERLVRVK TSVDPFDFFC DEQSIPPFSS VEVM

Best Arabidopsis Sequence Match ( AT4G20820.1 )
(BLAST)

001: MKFQSFFSSV LIFFTTSTLL LSIPHPVSAN RSNQSSFLQC LSLQLNDSNI VSKVIHTPND TSFSSVLASS IQNQRFSAPD VPKPVLILTP VQPSDVQSAV
101: KCARRFGIHI RTRSGGHDYE GLSYVTHKPF VILDLRNLRS ITVDVDNRSV WVQTGATIGE LYYEIGKKNR TLAFPAGVCP TVGVGGHFSG GGYGTLLRKH
201: GLAADHVIDA RVVDARGRIL ERREMGEDFF WAIRGGGGSS FCVVLSWKIG LINVPSTVTV FNVTKFSEQS ALKIIHRWQF VADKVSDDLF IRVMLQRYKN
301: MVRASFPGLY LGSVKNLLKM VNKEFPELGL EEDDCTEMSW IESVIWFAEL GEEPINVLTK RTRASLAFKA KSDFVQEPMP KTAISKLWRR LQEPEAEHAQ
401: LIFTPFGGKM SEIADYETPF PHRKGNIYEI QYLNYWRGDV KEKYMRWVER VYDDMSEFVA KSPRGAYINL RDLDLGMYVG VKRSKYEEGK SWGVKYFKNN
501: FERLVRVKTS VDPSDFFCDE QSIPPFTFVE VI

Arabidopsis Description

Berberine bridge enzyme-like 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.