CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77568	Canola	endoplasmic reticulum, plasma membrane	97.94	97.94
CDY70228	Canola	cytosol, golgi, peroxisome	53.75	93.18
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	92.88	92.88
AT1G30760.2	Thale cress	golgi	91.01	88.04
CDY43653	Canola	golgi	47.57	83.28
CDY70679	Canola	cytosol, mitochondrion, peroxisome	35.39	81.12
CDX84280	Canola	plasma membrane	76.59	80.35
CDY31642	Canola	plasma membrane	75.66	79.37
KRH42273	Soybean	nucleus	65.73	66.6
KRH36839	Soybean	nucleus	66.85	65.75
KRH58398	Soybean	plasma membrane, vacuole	65.36	65.72
KRH11824	Soybean	nucleus	66.29	65.19
KRH58399	Soybean	nucleus	64.04	64.04
Solyc02g070070.1.1	Tomato	extracellular	61.98	62.34
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	61.98	61.98
VIT_10s0003g05420.t01	Wine grape	vacuole	62.17	61.6
Solyc09g072660.2.1	Tomato	extracellular	63.3	61.57
CDY29118	Canola	cytosol, peroxisome, plastid	44.94	61.54
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	63.48	61.19
KRH42274	Soybean	mitochondrion, nucleus	59.55	60.8
CDY69093	Canola	vacuole	60.67	60.56
CDY29117	Canola	vacuole	60.49	60.37
CDY29122	Canola	cytosol	21.35	59.07
Solyc02g069690.1.1	Tomato	golgi, vacuole	60.11	58.68
PGSC0003DMT400089776	Potato	golgi, vacuole	59.93	58.5
CDY13105	Canola	vacuole	58.61	57.96
KRH42276	Soybean	nucleus	63.67	57.34
CDX94780	Canola	plasma membrane, vacuole	57.12	56.17
CDY49007	Canola	vacuole	56.74	56.01
CDY49011	Canola	vacuole	55.24	54.93
CDX94785	Canola	vacuole	55.06	54.75
CDX94786	Canola	vacuole	53.93	54.24
CDY66956	Canola	peroxisome, plasma membrane, plastid	41.76	52.97
CDY59834	Canola	peroxisome, plasma membrane, plastid	43.26	51.45
CDY16155	Canola	endoplasmic reticulum, extracellular, vacuole	48.31	49.62
CDX85019	Canola	extracellular	46.44	47.88
CDX77574	Canola	cytosol	35.77	47.75
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	39.89	47.54
CDX79005	Canola	vacuole	46.82	47.53
CDY68515	Canola	extracellular, plasma membrane	33.52	47.11
CDY16156	Canola	vacuole	46.44	47.06
TraesCS7B01G026000.1	Wheat	cytosol	29.21	46.99
CDX82775	Canola	extracellular, vacuole	46.44	46.97
CDY72595	Canola	extracellular, vacuole	33.33	46.84
KRG99206	Soybean	extracellular, peroxisome	35.21	46.53
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.91	46.12
CDX79004	Canola	extracellular, vacuole	45.51	46.11
CDX67534	Canola	plasma membrane, vacuole	46.25	46.0
CDX82774	Canola	extracellular, vacuole	45.32	45.92
TraesCS1D01G443200.1	Wheat	cytosol	26.97	45.57
CDX79582	Canola	mitochondrion	40.64	45.49
CDY70640	Canola	mitochondrion	40.64	45.49
CDY13353	Canola	plasma membrane	45.32	45.07
CDX77576	Canola	plasma membrane, vacuole	44.76	45.01
CDY50727	Canola	plasma membrane, vacuole	44.76	45.01
CDY50728	Canola	extracellular, vacuole	44.19	44.87
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	43.63	44.81
CDY02318	Canola	plasma membrane, vacuole	42.88	44.73
CDY49803	Canola	vacuole	44.38	44.72
CDX79007	Canola	golgi, vacuole	44.76	44.67
KXG20146	Sorghum	extracellular	44.57	44.65
CDX97984	Canola	plasma membrane, vacuole	44.38	44.63
CDX94788	Canola	vacuole	44.76	44.59
CDY69038	Canola	vacuole	44.94	44.53
CDY34627	Canola	vacuole	44.57	44.49
CDX82780	Canola	cytosol	17.79	44.39
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.88	44.21
CDX94009	Canola	vacuole	44.57	44.16
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	34.27	44.1
Zm00001d046322_P001	Maize	extracellular	43.82	44.07
TraesCS2D01G151500.1	Wheat	vacuole	43.63	44.05
CDX98676	Canola	vacuole	44.38	43.97
CDY31432	Canola	vacuole	43.63	43.88
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	43.45	43.86
CDX82776	Canola	endoplasmic reticulum, vacuole	43.82	43.82
CDX76449	Canola	vacuole	43.63	43.8
CDY52527	Canola	vacuole	44.38	43.73
CDY13104	Canola	extracellular, vacuole	43.63	43.71
CDY29116	Canola	extracellular, vacuole	43.63	43.71
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	42.7	43.68
TraesCS7A01G126600.1	Wheat	vacuole	42.51	43.65
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	42.51	43.49
TraesCS2B01G172300.1	Wheat	vacuole	43.07	43.48
CDX79010	Canola	cytosol	21.72	43.45
CDY34829	Canola	vacuole	43.63	43.31
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	43.63	43.31
Os06t0548200-01	Rice	extracellular	43.26	43.26
CDX79034	Canola	plastid	42.13	43.19
Zm00001d037005_P001	Maize	vacuole	42.32	43.13
TraesCS1D01G338700.1	Wheat	plasma membrane	43.26	43.1
CDY09547	Canola	extracellular, vacuole	42.51	43.07
KXG20147	Sorghum	vacuole	43.07	42.91
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	42.7	42.86
CDX94008	Canola	golgi	42.88	42.8
TraesCS1B01G456900.1	Wheat	vacuole	39.89	42.77
TraesCS1A01G424100.1	Wheat	vacuole	40.82	42.75
HORVU1Hr1G092680.1	Barley	golgi, vacuole	42.88	42.72
CDX82800	Canola	extracellular	41.76	42.72
HORVU7Hr1G089270.1	Barley	vacuole	42.51	42.67
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.88	42.64
CDX98675	Canola	golgi	42.7	42.62
CDY71012	Canola	extracellular, vacuole	42.13	42.61
TraesCS1B01G469800.1	Wheat	vacuole	42.88	42.57
TraesCS2B01G017300.1	Wheat	plastid	32.58	42.54
TraesCS7A01G354100.1	Wheat	vacuole	34.64	42.53
TraesCS5A01G261400.1	Wheat	vacuole	41.76	42.48
TraesCS1D01G433600.1	Wheat	vacuole	42.88	42.41
Zm00001d046318_P001	Maize	vacuole	42.13	42.37
TraesCS7B01G273600.1	Wheat	vacuole	41.01	42.36
TraesCS7B01G273500.1	Wheat	plastid	43.07	42.36
CDY09546	Canola	extracellular, vacuole	42.51	42.35
EER89910	Sorghum	vacuole	41.95	42.34
TraesCS2D01G006000.1	Wheat	plastid	40.07	42.29
TraesCS5D01G268800.1	Wheat	vacuole	41.57	42.29
CDY68914	Canola	golgi, plastid	34.27	42.26
Os06t0548100-00	Rice	golgi	42.32	42.24
CDY02321	Canola	extracellular, vacuole	42.13	41.98
TraesCS7D01G368700.1	Wheat	unclear	40.64	41.97
TraesCS2A01G051500.1	Wheat	peroxisome	26.78	41.94
TraesCS7B01G273700.1	Wheat	vacuole	40.82	41.92
TraesCS7A01G353900.1	Wheat	vacuole	40.64	41.81
HORVU2Hr1G008270.1	Barley	peroxisome	24.34	41.8
TraesCS7D01G368800.1	Wheat	vacuole	40.64	41.73
TraesCS2B01G016900.1	Wheat	vacuole	40.45	41.7
TraesCS7A01G354000.1	Wheat	vacuole	40.26	41.59
KXG26140	Sorghum	plasma membrane	41.57	41.5
Os06t0549600-01	Rice	extracellular	40.82	41.44
HORVU2Hr1G000540.1	Barley	golgi, vacuole	42.13	41.44
EER89908	Sorghum	plasma membrane, vacuole	41.76	41.37
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.01	41.32
EER89907	Sorghum	plasma membrane, vacuole	40.64	41.25
Zm00001d046319_P001	Maize	vacuole	40.64	41.25
KXG20949	Sorghum	vacuole	41.76	41.22
Zm00001d037008_P001	Maize	golgi, vacuole	39.33	41.1
EER89909	Sorghum	extracellular, plasma membrane, vacuole	40.45	41.06
TraesCS2B01G066900.1	Wheat	nucleus, unclear	40.45	40.99
Os06t0549900-01	Rice	extracellular	40.45	40.91
TraesCS7B01G273800.1	Wheat	plasma membrane	39.89	40.88
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.89	40.8
CDX79008	Canola	vacuole	43.26	40.67
HORVU2Hr1G013930.1	Barley	golgi, vacuole	41.57	40.66
TraesCS4B01G391900.1	Wheat	vacuole	38.95	40.62
TraesCS2A01G052600.1	Wheat	vacuole	40.45	40.6
Os06t0549300-00	Rice	extracellular	39.7	40.54
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.88	40.53
TraesCS2A01G052900.1	Wheat	unclear	40.07	40.53
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.51	40.42
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.89	40.42
TraesCSU01G034600.1	Wheat	vacuole	38.95	40.39
HORVU7Hr1G089160.3	Barley	vacuole	39.7	40.38
CDX82782	Canola	vacuole	43.07	40.35
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	39.51	40.34
Os06t0549633-00	Rice	vacuole	39.89	40.34
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.89	40.34
TraesCS2D01G052700.1	Wheat	unclear	39.89	40.34
Os06t0548800-01	Rice	extracellular	40.07	40.3
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	38.76	40.27
TraesCS7D01G472000.1	Wheat	vacuole	39.33	40.23
TraesCS2D01G052300.1	Wheat	plastid	39.7	40.23
TraesCS5B01G302700.1	Wheat	vacuole	39.14	40.19
TraesCS7A01G353800.1	Wheat	vacuole	39.14	40.19
HORVU7Hr1G089190.1	Barley	vacuole	39.51	40.19
HORVU2Hr1G122590.1	Barley	vacuole	40.26	40.19
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.98	40.17
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	38.76	40.12
EES13185	Sorghum	vacuole	41.01	40.11
TraesCS7B01G273900.1	Wheat	vacuole	38.95	40.0
TraesCS2B01G066800.1	Wheat	vacuole	39.51	39.96
TraesCS3A01G111600.1	Wheat	vacuole	39.7	39.92
HORVU2Hr1G008300.1	Barley	plastid	39.33	39.92
Os11t0495950-00	Rice	plasma membrane, vacuole	40.26	39.81
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.51	39.81
TraesCS2A01G005700.1	Wheat	vacuole	36.89	39.8
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	39.33	39.77
TraesCS5D01G309100.1	Wheat	vacuole	38.76	39.73
TraesCS3B01G070000.1	Wheat	mitochondrion	20.97	39.72
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.95	39.62
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	38.58	39.62
TraesCS7D01G393900.1	Wheat	vacuole	38.76	39.58
TraesCS7A01G400100.1	Wheat	unclear	38.76	39.43
TraesCS2B01G066400.1	Wheat	plastid	38.95	39.39
Os02t0235900-01	Rice	plasma membrane, vacuole	41.57	39.15
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	37.83	39.07
TraesCS2A01G542600.1	Wheat	vacuole	38.76	38.98
Zm00001d049169_P001	Maize	vacuole	38.39	38.83
TraesCS2B01G145300.1	Wheat	plasma membrane	41.57	38.81
TraesCS4B01G358600.1	Wheat	golgi	37.83	38.62
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	41.57	38.61
HORVU4Hr1G017270.1	Barley	vacuole	39.14	38.49
KXG28418	Sorghum	vacuole	38.02	38.45
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	41.2	38.39
TraesCS4B01G222500.1	Wheat	plasma membrane	40.64	38.34
TraesCS2D01G052400.1	Wheat	vacuole	28.84	38.31
HORVU2Hr1G008310.1	Barley	golgi, vacuole	38.95	38.31
HORVU7Hr1G093940.1	Barley	vacuole	38.02	38.3
TraesCS4A01G081300.1	Wheat	unclear	40.45	38.23
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.39	38.17
TraesCS4D01G223000.1	Wheat	plasma membrane	40.45	38.16
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.27	38.13
TraesCS4D01G101000.1	Wheat	golgi	38.76	38.12
TraesCS2B01G572400.1	Wheat	unclear	37.83	38.11
CDX85018	Canola	cytosol	47.75	38.06
TraesCS4B01G104000.1	Wheat	vacuole	38.76	38.05
TraesCS4A01G212100.1	Wheat	vacuole	38.58	38.01
Zm00001d016199_P001	Maize	mitochondrion	39.7	37.79
KXG29886	Sorghum	mitochondrion	40.64	37.35
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.45	37.31
TraesCS2B01G145500.1	Wheat	vacuole	40.64	37.29
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.45	37.18
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.07	36.83
TraesCS2D01G543700.1	Wheat	unclear	37.45	35.65
Zm00001d037009_P001	Maize	plasma membrane	38.58	35.15
KXG29885	Sorghum	plastid	32.96	35.13
HORVU7Hr1G089210.1	Barley	mitochondrion	39.7	34.53
HORVU7Hr1G026630.1	Barley	plastid	31.09	32.74
HORVU7Hr1G089260.1	Barley	mitochondrion	27.9	30.66

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	GO:A0A078JKM6	UniProt:A0A078JKM6
InterPro:BBE	EnsemblPlants:CDY67309	ProteinID:CDY67309	ProteinID:CDY67309.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf
InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
EnsemblPlantsGene:GSBRNA2T00060620001	InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE1673	SEG:seg	:	:	:	:

Description

BnaCnng54420DBnaCnng54420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JKM6]

Coordinates

chrLK035959:-:5331..7852

Molecular Weight (calculated)

60105.8 Da

IEP (calculated)

9.677

GRAVY (calculated)

-0.222

Length

534 amino acids

Sequence
(BLAST)

001: MAFAGVTNAN MFLITLLLLS LSSIPLSSST IQQDFVMCLV DNSDASFPMD SSFFTRDLNA SSFKQALETS AQNLRYLMPS KPKPEFIFEP LYETHVQAAV
101: VCAKKLRLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQINVDLESN TAWIHAGASI GEVYYRIQEK SKVHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDAKGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPDVV TVFTVTKTLE QDGTRVLYKW QQVADKLDEN LFIRAIIQPA
301: SKTPKSKERT ISVSYQGQFL GDAKRLLQVM QRSFPQLGLK KKDCLETSWI KSVMYIAGFP STAPPEALLA GKSLFKNYFK AKSDYVEKPI PIEGLEGLWK
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKA SEAKHMEWMR NMYSYMEKYV SKNPRSAYVN YRDLDLGMNG RGTDAREWGN
501: KYFKGNFERL VKIKAKFDPE NFFRHEQSIP TKFK

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.