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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
 nucleus: 21132161
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH42276 Soybean nucleus 95.32 85.83
KRH58398 Soybean plasma membrane, vacuole 70.79 71.19
KRH42273 Soybean nucleus 70.22 71.16
KRG99206 Soybean extracellular, peroxisome 53.56 70.79
KRH36839 Soybean nucleus 71.16 69.98
KRH11824 Soybean nucleus 70.79 69.61
CDY70228 Canola cytosol, golgi, peroxisome 38.02 65.91
CDY43653 Canola golgi 37.64 65.9
VIT_10s0003g05420.t01 Wine grape vacuole 66.1 65.49
KRH42274 Soybean mitochondrion, nucleus 63.86 65.2
Bra023131.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 64.04 64.04
CDY02326 Canola endoplasmic reticulum, plasma membrane, vacuole 64.04 64.04
CDY67309 Canola endoplasmic reticulum, plasma membrane 64.04 64.04
CDX77568 Canola endoplasmic reticulum, plasma membrane 63.86 63.86
Bra014890.1-P Field mustard plasma membrane 63.67 63.67
Bra005392.1-P Field mustard plasma membrane 63.3 63.53
CDY31642 Canola plasma membrane 60.11 63.06
Solyc02g069690.1.1 Tomato golgi, vacuole 64.23 62.71
PGSC0003DMT400089776 Potato golgi, vacuole 63.86 62.34
CDX84280 Canola plasma membrane 59.36 62.28
AT2G34790.1 Thale cress golgi, vacuole 61.98 62.22
Solyc09g072660.2.1 Tomato extracellular 63.86 62.11
PGSC0003DMT400062414 Potato plasma membrane, vacuole 64.23 61.91
AT1G30760.2 Thale cress golgi 63.67 61.59
PGSC0003DMT400054393 Potato plasma membrane, vacuole 61.05 61.05
CDY70679 Canola cytosol, mitochondrion, peroxisome 26.59 60.94
Solyc02g070070.1.1 Tomato extracellular 60.3 60.64
Bra021930.1-P Field mustard plasma membrane 56.74 60.36
KRH41927 Soybean nucleus 51.5 51.89
KRH36852 Soybean plastid 42.51 51.24
KRH42266 Soybean vacuole 51.69 51.21
KRH58389 Soybean nucleus 49.81 49.63
KRH58387 Soybean plastid, vacuole 50.94 49.54
KRH56394 Soybean vacuole 48.88 49.53
KRH58388 Soybean vacuole 50.37 49.18
KRH36766 Soybean vacuole 49.06 49.16
KRH42268 Soybean vacuole 48.69 49.15
KRH36843 Soybean vacuole 48.88 48.97
KRH58344 Soybean vacuole 48.5 48.87
KRH58391 Soybean vacuole 48.5 48.87
KRH36842 Soybean vacuole 48.69 48.78
KRH42269 Soybean vacuole 48.5 48.78
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 40.82 48.66
KRH36853 Soybean vacuole 48.88 48.6
KRH11845 Soybean vacuole 48.69 48.6
KRH62528 Soybean endoplasmic reticulum, golgi, vacuole 47.57 48.11
KRH56395 Soybean nucleus 47.57 48.02
KRH36840 Soybean nucleus 49.25 47.99
KRH11844 Soybean vacuole 48.5 47.87
KRH42808 Soybean extracellular, vacuole 47.94 47.85
KRH42267 Soybean vacuole 47.19 47.82
KRH11826 Soybean nucleus 48.69 47.79
TraesCS7B01G026000.1 Wheat cytosol 29.59 47.59
KRH49946 Soybean extracellular, vacuole 37.64 47.41
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 45.88 47.3
KRH42272 Soybean vacuole 47.57 47.12
KXG20146 Sorghum extracellular 46.63 46.72
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 19.1 46.58
TraesCS7A01G354100.1 Wheat vacuole 37.83 46.44
TraesCS2D01G151500.1 Wheat vacuole 45.88 46.31
TraesCS7D01G369200.1 Wheat extracellular, vacuole 45.88 46.31
TraesCS1D01G443200.1 Wheat cytosol 27.34 46.2
KRH11827 Soybean vacuole 46.44 46.18
KRH41928 Soybean vacuole 45.88 46.14
TraesCS2B01G172300.1 Wheat vacuole 45.69 46.12
TraesCS1B01G456900.1 Wheat vacuole 42.88 45.98
TraesCS1D01G338700.1 Wheat plasma membrane 46.07 45.9
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 35.58 45.78
EER89910 Sorghum vacuole 45.32 45.75
HORVU1Hr1G092680.1 Barley golgi, vacuole 45.88 45.71
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 44.38 45.58
Zm00001d046322_P001 Maize extracellular 45.32 45.57
TraesCS1B01G469800.1 Wheat vacuole 45.88 45.54
KRH11830 Soybean vacuole 41.95 45.53
HORVU7Hr1G089270.1 Barley vacuole 45.32 45.49
TraesCS7A01G354000.1 Wheat vacuole 44.01 45.45
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 45.69 45.44
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 45.69 45.35
TraesCS7B01G273500.1 Wheat plastid 46.07 45.3
TraesCS7D01G368700.1 Wheat unclear 43.82 45.26
TraesCS1A01G424100.1 Wheat vacuole 43.07 45.1
HORVU2Hr1G008270.1 Barley peroxisome 26.22 45.02
Zm00001d046318_P001 Maize vacuole 44.76 45.01
TraesCS1D01G433600.1 Wheat vacuole 45.51 45.0
TraesCS5A01G261400.1 Wheat vacuole 44.19 44.95
KRH11841 Soybean vacuole 47.0 44.9
Os06t0549900-01 Rice extracellular 44.38 44.89
TraesCS7B01G273600.1 Wheat vacuole 43.45 44.87
KXG20147 Sorghum vacuole 44.94 44.78
TraesCS5D01G268800.1 Wheat vacuole 44.01 44.76
Os06t0548200-01 Rice extracellular 44.76 44.76
TraesCS7A01G353700.1 Wheat extracellular, vacuole 44.57 44.74
TraesCS7B01G273700.1 Wheat vacuole 43.45 44.62
TraesCS4B01G391900.1 Wheat vacuole 42.7 44.53
Os06t0549600-01 Rice extracellular 43.82 44.49
KRH36851 Soybean vacuole 47.0 44.42
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 42.88 44.38
KRH42271 Soybean endoplasmic reticulum 47.94 44.37
Os06t0548100-00 Rice golgi 44.38 44.3
TraesCS2A01G051500.1 Wheat peroxisome 28.28 44.28
TraesCS7A01G126600.1 Wheat vacuole 43.07 44.23
HORVU7Hr1G089160.3 Barley vacuole 43.45 44.19
TraesCS7A01G353900.1 Wheat vacuole 42.88 44.12
Zm00001d037005_P001 Maize vacuole 43.26 44.08
TraesCSU01G034600.1 Wheat vacuole 42.51 44.08
TraesCS7D01G368800.1 Wheat vacuole 42.88 44.04
TraesCS3B01G070000.1 Wheat mitochondrion 23.22 43.97
KRH11825 Soybean vacuole 42.88 43.87
KRH58395 Soybean endoplasmic reticulum 47.75 43.81
EER89909 Sorghum extracellular, plasma membrane, vacuole 42.88 43.54
KXG20949 Sorghum vacuole 43.82 43.25
TraesCS7A01G400100.1 Wheat unclear 42.51 43.24
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 41.76 43.13
TraesCS7D01G393900.1 Wheat vacuole 42.13 43.02
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 42.7 43.02
TraesCS5D01G309100.1 Wheat vacuole 41.95 42.99
KXG28418 Sorghum vacuole 42.51 42.99
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 41.95 42.83
HORVU2Hr1G122590.1 Barley vacuole 42.88 42.8
KXG26140 Sorghum plasma membrane 42.88 42.8
HORVU2Hr1G008300.1 Barley plastid 42.13 42.78
KRH36841 Soybean vacuole 31.46 42.75
TraesCS5B01G302700.1 Wheat vacuole 41.57 42.69
EER89908 Sorghum plasma membrane, vacuole 43.07 42.67
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.13 42.61
Zm00001d049169_P001 Maize vacuole 42.13 42.61
KRH71761 Soybean mitochondrion, plastid, vacuole 33.9 42.59
TraesCS2A01G542600.1 Wheat vacuole 42.32 42.56
Os06t0549300-00 Rice extracellular 41.57 42.45
TraesCS4B01G358600.1 Wheat golgi 41.57 42.45
Os06t0549633-00 Rice vacuole 41.95 42.42
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 44.76 42.3
TraesCS2A01G052600.1 Wheat vacuole 42.13 42.29
TraesCS2D01G006000.1 Wheat plastid 40.07 42.29
TraesCS2B01G066800.1 Wheat vacuole 41.76 42.23
HORVU2Hr1G000540.1 Barley golgi, vacuole 42.88 42.17
TraesCS2B01G066900.1 Wheat nucleus, unclear 41.57 42.13
TraesCS2D01G052300.1 Wheat plastid 41.57 42.13
EES13185 Sorghum vacuole 43.07 42.12
TraesCS2A01G052800.1 Wheat plastid, vacuole 41.39 42.1
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 41.76 42.08
TraesCS2B01G572400.1 Wheat unclear 41.76 42.08
TraesCS2B01G017300.1 Wheat plastid 32.21 42.05
TraesCS2A01G052900.1 Wheat unclear 41.57 42.05
Os06t0548800-01 Rice extracellular 41.76 42.0
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 41.39 41.94
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 41.39 41.86
KRH12123 Soybean plastid 35.77 41.7
TraesCS3A01G111600.1 Wheat vacuole 41.39 41.62
EER89907 Sorghum plasma membrane, vacuole 40.82 41.44
HORVU7Hr1G093940.1 Barley vacuole 41.01 41.32
TraesCS2D01G052700.1 Wheat unclear 40.64 41.1
Os02t0235900-01 Rice plasma membrane, vacuole 43.63 41.09
HORVU4Hr1G017270.1 Barley vacuole 41.76 41.07
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 39.51 41.05
TraesCS4B01G222500.1 Wheat plasma membrane 43.45 40.99
Os11t0495950-00 Rice plasma membrane, vacuole 41.39 40.93
TraesCS2B01G066400.1 Wheat plastid 40.45 40.91
TraesCS2B01G145300.1 Wheat plasma membrane 43.82 40.91
HORVU2Hr1G013930.1 Barley golgi, vacuole 41.76 40.84
TraesCS2B01G016900.1 Wheat vacuole 39.51 40.73
Zm00001d037008_P001 Maize golgi, vacuole 38.95 40.7
TraesCS7B01G273800.1 Wheat plasma membrane 39.7 40.69
Zm00001d046319_P001 Maize vacuole 40.07 40.68
TraesCS4D01G223000.1 Wheat plasma membrane 43.07 40.64
TraesCS4B01G104000.1 Wheat vacuole 41.39 40.62
TraesCS4A01G212100.1 Wheat vacuole 41.2 40.59
TraesCS4D01G101000.1 Wheat golgi 41.2 40.52
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 39.51 40.42
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 43.45 40.35
HORVU2Hr1G008310.1 Barley golgi, vacuole 41.01 40.33
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 43.26 40.31
TraesCS7A01G353800.1 Wheat vacuole 39.14 40.19
TraesCS4A01G081300.1 Wheat unclear 42.51 40.18
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 43.45 40.07
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 39.14 40.04
TraesCS7D01G472000.1 Wheat vacuole 39.14 40.04
Zm00001d016199_P001 Maize mitochondrion 41.95 39.93
TraesCS7B01G273900.1 Wheat vacuole 38.76 39.81
TraesCS7D01G369000.1 Wheat extracellular, vacuole 38.76 39.81
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 43.26 39.76
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 32.58 39.73
TraesCS2A01G005700.1 Wheat vacuole 36.7 39.6
TraesCS2D01G052400.1 Wheat vacuole 29.78 39.55
HORVU7Hr1G089190.1 Barley vacuole 38.76 39.43
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 17.6 39.33
TraesCS2D01G543700.1 Wheat unclear 41.01 39.04
TraesCS2D01G126400.1 Wheat golgi, vacuole 42.13 38.86
TraesCS2B01G145500.1 Wheat vacuole 42.32 38.83
KXG29886 Sorghum mitochondrion 42.13 38.73
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 41.95 38.55
Zm00001d037009_P001 Maize plasma membrane 41.57 37.88
KRH34335 Soybean vacuole 38.76 37.64
KXG29885 Sorghum plastid 35.21 37.52
KRG92465 Soybean golgi, vacuole 38.02 36.91
HORVU7Hr1G089210.1 Barley mitochondrion 39.89 34.69
HORVU7Hr1G026630.1 Barley plastid 32.4 34.12
HORVU7Hr1G089260.1 Barley mitochondrion 27.9 30.66
Protein Annotations
EntrezGene:100782631Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1EMBL:ACUP02003258
InterPro:BBEInterPro:FAD-bd_2InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1EnsemblPlantsGene:GLYMA_05G125900GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0016614GO:GO:0050660GO:GO:0055114GO:GO:0071949UniProt:I1K2X7InterPro:IPR016166
InterPro:IPR016167EnsemblPlants:KRH58399ProteinID:KRH58399ProteinID:KRH58399.1InterPro:Oxid_FAD_bind_NPFAM:PF01565
PFAM:PF08031PFscan:PS51387PANTHER:PTHR32448PANTHER:PTHR32448:SF35SUPFAM:SSF56176SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000233A860SEG:seg:::
Description
hypothetical protein
Coordinates
chr5:+:31937568..31939797
Molecular Weight (calculated)
59711.5 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.142
Length
534 amino acids
Sequence
(BLAST)
001: MQSVRSILAS FVVLLLSISF TASLPIEEAF NHCLTQHSQT PNQFSSSIYT STNGSFTSIL ESTAQNLRYL LPSVPKPDFI FTPLDDSQVQ AAVICAKKLG
101: IHMRVRSGGH DYEGLSYVSL IEKPFMILDL AKLRAVNVDI ARNTAWIQAG ATIGEVYYRI SEKSAVHGFP AGLCTTLGIG GHITGGAYGS MMRKYGLGAD
201: NVRDARIVDA KGRVLDRKAM GEDLFWAIRG GGGGSFGVIL WWKIKLVPVP QTVTVFTVTK TLEQGGNKLL QRWQQVAPKI DENLFIRVII QPGNGTVPGK
301: RTLTTSYNAL FLGGADRLLQ VMKHGFPELG LTIKDCVETS WIKSVLYIAG YPDGTAPEVL LQGKSTTKAY FKAKSDFVRE VIPEKSLDAL WKIFVQDDGP
401: LMIWNPYGGK MSRIAESATP FPHRKGVLYK IQYVTGWLDG EKSMAKHMNW MRKFYFYMAP YVSKYPRETY VNYRDLDIGM NQKNNTSLLK AWSWGYRYFK
501: GNFNRLVKVK TKVDPSNFFR HEQSIPLLPT GKKG
Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)
001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE
Arabidopsis Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.