Factsheet for PGSC0003DMT400062414

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 7
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g072660.2.1	Tomato	extracellular	97.11	98.0
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	74.55	77.34
VIT_10s0003g05420.t01	Wine grape	vacuole	68.41	70.32
CDY70228	Canola	cytosol, golgi, peroxisome	38.45	69.16
KRH36839	Soybean	nucleus	67.15	68.51
CDY43653	Canola	golgi	37.55	68.2
KRH42273	Soybean	nucleus	64.26	67.55
KRH11824	Soybean	nucleus	66.06	67.4
PGSC0003DMT400089776	Potato	golgi, vacuole	66.06	66.91
KRH58398	Soybean	plasma membrane, vacuole	63.9	66.67
CDY70679	Canola	cytosol, mitochondrion, peroxisome	27.08	64.38
KRH58399	Soybean	nucleus	61.91	64.23
CDX77568	Canola	endoplasmic reticulum, plasma membrane	61.55	63.86
Bra014890.1-P	Field mustard	plasma membrane	61.19	63.48
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	61.19	63.48
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	61.19	63.48
CDY67309	Canola	endoplasmic reticulum, plasma membrane	61.19	63.48
Bra005392.1-P	Field mustard	plasma membrane	60.47	62.97
CDX84280	Canola	plasma membrane	56.68	61.69
CDY31642	Canola	plasma membrane	56.68	61.69
AT2G34790.1	Thale cress	golgi, vacuole	59.21	61.65
AT1G30760.2	Thale cress	golgi	61.01	61.23
KRH42274	Soybean	mitochondrion, nucleus	57.4	60.8
Bra021930.1-P	Field mustard	plasma membrane	54.51	60.16
KRH42276	Soybean	nucleus	60.65	56.66
PGSC0003DMT400080465	Potato	cytosol	40.97	55.91
PGSC0003DMT400080468	Potato	vacuole	52.89	55.49
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	41.7	53.6
PGSC0003DMT400080467	Potato	vacuole	51.44	52.97
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	50.36	52.64
PGSC0003DMT400054385	Potato	plastid	46.93	52.53
PGSC0003DMT400054564	Potato	cytosol, plastid	46.39	52.02
PGSC0003DMT400054571	Potato	cytosol	38.09	51.97
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.21	50.69
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	40.79	50.45
PGSC0003DMT400054386	Potato	vacuole	48.01	50.0
PGSC0003DMT400043091	Potato	extracellular	46.75	48.96
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.64	48.92
KRG99206	Soybean	extracellular, peroxisome	35.38	48.51
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	44.58	48.15
PGSC0003DMT400086243	Potato	vacuole	45.31	47.72
PGSC0003DMT400046308	Potato	extracellular	46.75	47.61
TraesCS1D01G443200.1	Wheat	cytosol	27.08	47.47
TraesCS7B01G026000.1	Wheat	cytosol	27.26	45.48
KXG20146	Sorghum	extracellular	43.68	45.4
PGSC0003DMT400057528	Potato	extracellular	44.04	45.35
PGSC0003DMT400012979	Potato	cytosol	32.49	45.23
Os06t0549600-01	Rice	extracellular	42.6	44.87
TraesCS7A01G354100.1	Wheat	vacuole	35.2	44.83
TraesCS2B01G172300.1	Wheat	vacuole	42.78	44.8
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	41.88	44.79
HORVU1Hr1G092680.1	Barley	golgi, vacuole	43.32	44.78
Zm00001d046322_P001	Maize	extracellular	42.78	44.63
TraesCS2D01G151500.1	Wheat	vacuole	42.6	44.61
TraesCS1B01G456900.1	Wheat	vacuole	40.07	44.58
TraesCS2A01G051500.1	Wheat	peroxisome	27.44	44.57
TraesCS7D01G368700.1	Wheat	unclear	41.52	44.49
TraesCS1D01G338700.1	Wheat	plasma membrane	42.96	44.4
Os06t0548100-00	Rice	golgi	42.78	44.3
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.51	44.29
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.24	44.23
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	44.22	44.22
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.78	44.13
TraesCS1D01G433600.1	Wheat	vacuole	42.96	44.07
TraesCS1B01G469800.1	Wheat	vacuole	42.78	44.05
HORVU2Hr1G008270.1	Barley	peroxisome	24.73	44.05
TraesCS7B01G273700.1	Wheat	vacuole	41.34	44.04
TraesCS7D01G368800.1	Wheat	vacuole	41.34	44.04
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	42.24	43.98
TraesCS7A01G354000.1	Wheat	vacuole	40.97	43.91
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.6	43.87
HORVU7Hr1G089270.1	Barley	vacuole	42.06	43.8
TraesCS1A01G424100.1	Wheat	vacuole	40.07	43.53
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.79	43.46
TraesCS7B01G273600.1	Wheat	vacuole	40.43	43.33
Zm00001d046318_P001	Maize	vacuole	41.52	43.31
TraesCS3B01G070000.1	Wheat	mitochondrion	22.02	43.26
TraesCS5A01G261400.1	Wheat	vacuole	40.97	43.24
TraesCS5D01G268800.1	Wheat	vacuole	40.97	43.24
TraesCS7A01G353900.1	Wheat	vacuole	40.43	43.16
EER89910	Sorghum	vacuole	41.16	43.1
Os06t0548200-01	Rice	extracellular	41.52	43.07
HORVU7Hr1G089160.3	Barley	vacuole	40.79	43.05
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	41.7	43.02
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	39.71	42.8
TraesCS7B01G273500.1	Wheat	plastid	41.88	42.73
KXG20147	Sorghum	vacuole	41.34	42.72
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	40.25	42.64
TraesCS4B01G391900.1	Wheat	vacuole	39.35	42.58
TraesCS2A01G052800.1	Wheat	plastid, vacuole	40.25	42.48
TraesCS7A01G126600.1	Wheat	vacuole	39.71	42.31
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	40.43	42.26
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	39.35	42.25
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.25	42.23
PGSC0003DMT400009569	Potato	cytosol	36.28	42.23
KXG20949	Sorghum	vacuole	41.16	42.14
TraesCSU01G034600.1	Wheat	vacuole	39.17	42.14
EER89908	Sorghum	plasma membrane, vacuole	40.97	42.12
Os06t0549300-00	Rice	extracellular	39.71	42.06
Os06t0549900-01	Rice	extracellular	40.07	42.05
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.71	41.83
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.97	41.8
HORVU2Hr1G122590.1	Barley	vacuole	40.25	41.68
Zm00001d037005_P001	Maize	vacuole	39.35	41.6
EES13185	Sorghum	vacuole	40.97	41.58
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.53	41.56
KXG26140	Sorghum	plasma membrane	40.07	41.5
TraesCS2B01G066800.1	Wheat	vacuole	39.53	41.48
TraesCS5D01G309100.1	Wheat	vacuole	38.99	41.46
TraesCS2D01G052300.1	Wheat	plastid	39.35	41.37
TraesCS5B01G302700.1	Wheat	vacuole	38.81	41.35
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	41.88	41.21
TraesCS4B01G104000.1	Wheat	vacuole	40.43	41.18
TraesCS2A01G052600.1	Wheat	vacuole	39.53	41.17
TraesCS2D01G006000.1	Wheat	plastid	37.55	41.11
TraesCS2D01G052700.1	Wheat	unclear	39.17	41.1
TraesCS2B01G017300.1	Wheat	plastid	30.32	41.08
HORVU2Hr1G008300.1	Barley	plastid	38.99	41.06
TraesCS2A01G542600.1	Wheat	vacuole	39.35	41.05
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.27	41.01
TraesCS2B01G066400.1	Wheat	plastid	38.99	40.91
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.7	40.88
HORVU4Hr1G017270.1	Barley	vacuole	40.07	40.88
Os06t0548800-01	Rice	extracellular	39.17	40.87
Zm00001d037008_P001	Maize	golgi, vacuole	37.55	40.7
TraesCS4D01G101000.1	Wheat	golgi	39.89	40.7
TraesCS4B01G222500.1	Wheat	plasma membrane	41.52	40.64
TraesCS4A01G212100.1	Wheat	vacuole	39.71	40.59
TraesCS7D01G393900.1	Wheat	vacuole	38.27	40.54
Os06t0549633-00	Rice	vacuole	38.63	40.53
TraesCS2A01G052900.1	Wheat	unclear	38.63	40.53
EER89907	Sorghum	plasma membrane, vacuole	38.45	40.49
TraesCS3A01G111600.1	Wheat	vacuole	38.81	40.49
TraesCS7A01G400100.1	Wheat	unclear	38.27	40.38
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.63	40.38
TraesCS2B01G572400.1	Wheat	unclear	38.63	40.38
TraesCS4B01G358600.1	Wheat	golgi	38.09	40.34
Zm00001d049169_P001	Maize	vacuole	38.45	40.34
Zm00001d046319_P001	Maize	vacuole	38.27	40.3
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.27	40.23
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.27	40.15
TraesCS7B01G273800.1	Wheat	plasma membrane	37.73	40.12
TraesCS4D01G223000.1	Wheat	plasma membrane	40.97	40.11
KXG28418	Sorghum	vacuole	38.09	39.96
TraesCS4A01G081300.1	Wheat	unclear	40.61	39.82
HORVU7Hr1G093940.1	Barley	vacuole	37.91	39.62
HORVU7Hr1G089190.1	Barley	vacuole	37.55	39.62
Zm00001d016199_P001	Maize	mitochondrion	40.07	39.57
HORVU2Hr1G013930.1	Barley	golgi, vacuole	38.99	39.56
TraesCS7A01G353800.1	Wheat	vacuole	37.0	39.42
TraesCS7B01G273900.1	Wheat	vacuole	37.0	39.42
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	37.0	39.27
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	37.0	39.27
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	41.16	39.24
TraesCS2B01G016900.1	Wheat	vacuole	36.64	39.19
Os02t0235900-01	Rice	plasma membrane, vacuole	40.07	39.15
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	40.43	39.09
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	36.64	39.04
TraesCS7D01G472000.1	Wheat	vacuole	36.64	38.89
TraesCS2B01G145300.1	Wheat	plasma membrane	40.07	38.81
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.25	38.78
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.61	38.73
TraesCS2A01G005700.1	Wheat	vacuole	34.48	38.59
TraesCS2D01G052400.1	Wheat	vacuole	27.98	38.56
Os11t0495950-00	Rice	plasma membrane, vacuole	37.55	38.52
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.25	38.51
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.25	38.51
HORVU2Hr1G008310.1	Barley	golgi, vacuole	37.73	38.49
TraesCS2B01G145500.1	Wheat	vacuole	40.25	38.32
KXG29886	Sorghum	mitochondrion	40.07	38.21
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.96	37.9
TraesCS2D01G543700.1	Wheat	unclear	37.91	37.43
KXG29885	Sorghum	plastid	33.75	37.33
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	15.52	35.98
Zm00001d037009_P001	Maize	plasma membrane	37.55	35.49
HORVU7Hr1G089210.1	Barley	mitochondrion	38.27	34.53
HORVU7Hr1G089260.1	Barley	mitochondrion	27.98	31.89
HORVU7Hr1G026630.1	Barley	plastid	29.06	31.76

Protein Annotations

EntrezGene:102596095	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1C916	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400024289	PGSC:PGSC0003DMG400024289	EnsemblPlants:PGSC0003DMT400062414	PFscan:PS51257
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000296419E
RefSeq:XP_006367236.1	SEG:seg	:	:	:	:

Description

Reticuline oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400024289]

Coordinates

chr9:-:50417898..50420300

Molecular Weight (calculated)

62482.2 Da

IEP (calculated)

7.174

GRAVY (calculated)

-0.168

Length

554 amino acids

Sequence
(BLAST)

001: MKSLNFSVML SIFLIVLLYS CSSSYALSDD STSSLNGKLY ECICQNSDYC VPFSTAFVTP TNDSFNTILQ STAQNLRCLL PSVTKPQIIF TPMAESHVQA
101: AVICSKQLGL QLRVRSGGHD YEGLSYMSDM ESPFIILDLS KLREIVVNTE DNYAWTQAGA TVGEVYYRIS EKSKTHGFPA GLCTSLGIGG HITGGAYGTM
201: MRKYGLGVDN VVDARIVDAN GRILDRQSMG EDLFWAIRGG GGASFGIILS WKLKLVPVPS IVTVFTVPKT LDQNATNILY KWQQVAADKL DEDLFIRVII
301: NVVADKKGEK TIQTAYNSMF LGRADRLLQI MNDVFPELGL TQKDCTEMSW IKSIMYIAGY PSNTPPEVLL QGKSLFKNYF KAKSDFVKEP IPIDGLEGLW
401: KRLMEEDSPL VIWNPYGGMM AKISESETPF PHRKGIIYMI QYLTLWNDPS KESATKHYDW IRRLYNYMTP YASMFPREAY VNYRDLDIGM NKNESSSFIE
501: ASVWGNKYYK DNFNRLVKVK TKVDPENFFL HEQSIPTLPI TRKGEGKSVN HFEM

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.