Factsheet for PGSC0003DMT400046308

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 7
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g022850.1.1	Tomato	vacuole	88.79	89.28
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	47.43	59.86
VIT_03s0017g01470.t01	Wine grape	vacuole	34.38	59.74
VIT_03s0017g01490.t01	Wine grape	vacuole	59.19	59.08
PGSC0003DMT400043091	Potato	extracellular	57.35	58.98
KRH36766	Soybean	vacuole	56.62	57.79
KRH36842	Soybean	vacuole	56.62	57.79
Bra038798.1-P	Field mustard	vacuole	56.99	57.51
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	58.27	57.43
KRH11826	Soybean	nucleus	57.35	57.35
CDX98676	Canola	vacuole	56.8	57.33
AT4G20840.1	Thale cress	plasma membrane	56.62	57.14
KRH36840	Soybean	nucleus	57.35	56.93
CDX94008	Canola	golgi	55.88	56.82
KRH11827	Soybean	vacuole	56.07	56.8
CDX94009	Canola	vacuole	55.88	56.4
CDY31432	Canola	vacuole	54.96	56.31
CDX98675	Canola	golgi	55.33	56.26
Bra020915.1-P	Field mustard	vacuole	54.78	56.12
Bra038799.1-P	Field mustard	golgi	55.15	56.07
Bra013476.1-P	Field mustard	cytosol, plastid	55.51	56.03
CDX76449	Canola	vacuole	54.6	55.83
KRH42272	Soybean	vacuole	54.96	55.47
CDY49803	Canola	vacuole	53.86	55.28
Bra019831.1-P	Field mustard	plasma membrane, vacuole	53.86	55.18
CDX97984	Canola	plasma membrane, vacuole	53.86	55.18
KRH36843	Soybean	vacuole	54.04	55.16
VIT_10s0003g05450.t01	Wine grape	extracellular	57.9	54.88
CDX79008	Canola	vacuole	56.99	54.58
KRH42271	Soybean	endoplasmic reticulum	57.72	54.42
CDX82782	Canola	vacuole	56.8	54.21
KRH36841	Soybean	vacuole	39.15	54.2
KRH11830	Soybean	vacuole	48.9	54.06
AT1G11770.1	Thale cress	vacuole	52.94	53.73
AT4G20830.1	Thale cress	vacuole	56.25	53.68
KRH58395	Soybean	endoplasmic reticulum	57.35	53.61
AT1G01980.1	Thale cress	plasma membrane, vacuole	53.31	53.6
Bra028530.1-P	Field mustard	plasma membrane, vacuole	52.76	53.45
CDX67534	Canola	plasma membrane, vacuole	52.57	53.26
CDY13353	Canola	plasma membrane	52.39	53.07
CDY02321	Canola	extracellular, vacuole	52.02	52.8
AT1G30740.2	Thale cress	vacuole	51.47	52.24
CDY09546	Canola	extracellular, vacuole	51.29	52.05
PGSC0003DMT400080465	Potato	cytosol	38.42	51.48
CDY34627	Canola	vacuole	50.18	51.03
CDY34829	Canola	vacuole	50.0	50.56
Bra031780.1-P	Field mustard	vacuole	49.82	50.37
PGSC0003DMT400080467	Potato	vacuole	49.45	50.0
PGSC0003DMT400080468	Potato	vacuole	48.16	49.62
PGSC0003DMT400054571	Potato	cytosol	36.95	49.51
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	47.61	48.87
PGSC0003DMT400054564	Potato	cytosol, plastid	43.75	48.18
PGSC0003DMT400054385	Potato	plastid	43.75	48.08
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	39.52	47.99
PGSC0003DMT400054386	Potato	vacuole	46.88	47.93
TraesCS7A01G354100.1	Wheat	vacuole	38.24	47.82
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	47.61	46.75
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	43.93	46.59
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	45.59	46.44
TraesCS1D01G443200.1	Wheat	cytosol	26.65	45.89
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.51	45.73
TraesCS7A01G353900.1	Wheat	vacuole	43.57	45.66
TraesCS7D01G368700.1	Wheat	unclear	43.38	45.65
TraesCS7B01G273700.1	Wheat	vacuole	43.57	45.58
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	43.2	45.37
PGSC0003DMT400057528	Potato	extracellular	44.85	45.35
TraesCS7B01G273600.1	Wheat	vacuole	43.01	45.26
TraesCS2B01G017300.1	Wheat	plastid	34.01	45.23
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.2	45.21
PGSC0003DMT400086243	Potato	vacuole	43.57	45.06
TraesCS7D01G368800.1	Wheat	vacuole	43.01	45.0
TraesCS7A01G354000.1	Wheat	vacuole	42.65	44.87
Zm00001d037005_P001	Maize	vacuole	43.2	44.85
HORVU7Hr1G089160.3	Barley	vacuole	43.2	44.76
Os06t0549300-00	Rice	extracellular	42.83	44.55
PGSC0003DMT400089776	Potato	golgi, vacuole	44.67	44.42
EER89910	Sorghum	vacuole	43.2	44.42
TraesCS2B01G172300.1	Wheat	vacuole	43.2	44.42
Zm00001d046318_P001	Maize	vacuole	43.2	44.26
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	43.01	44.23
PGSC0003DMT400012979	Potato	cytosol	32.35	44.22
TraesCS1A01G424100.1	Wheat	vacuole	41.36	44.12
EER89909	Sorghum	extracellular, plasma membrane, vacuole	42.65	44.11
TraesCS1B01G469800.1	Wheat	vacuole	43.57	44.05
TraesCS2D01G151500.1	Wheat	vacuole	42.83	44.05
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.01	43.98
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	43.2	43.76
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.2	43.76
HORVU2Hr1G008270.1	Barley	peroxisome	25.0	43.73
TraesCS1D01G338700.1	Wheat	plasma membrane	43.01	43.66
Zm00001d037008_P001	Maize	golgi, vacuole	40.99	43.64
TraesCS5A01G261400.1	Wheat	vacuole	42.1	43.62
HORVU7Hr1G089270.1	Barley	vacuole	42.65	43.61
TraesCS5D01G309100.1	Wheat	vacuole	41.73	43.57
Os06t0549600-01	Rice	extracellular	42.1	43.54
TraesCS5D01G268800.1	Wheat	vacuole	41.91	43.43
EER89908	Sorghum	plasma membrane, vacuole	43.01	43.41
Os06t0549900-01	Rice	extracellular	42.1	43.37
EER89907	Sorghum	plasma membrane, vacuole	41.91	43.35
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	44.12	43.32
TraesCS4B01G358600.1	Wheat	golgi	41.54	43.21
Os06t0549633-00	Rice	vacuole	41.91	43.18
Os06t0548100-00	Rice	golgi	42.46	43.18
Zm00001d046319_P001	Maize	vacuole	41.73	43.16
TraesCS1D01G433600.1	Wheat	vacuole	42.83	43.15
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.65	43.12
HORVU1Hr1G092680.1	Barley	golgi, vacuole	42.46	43.1
TraesCS7B01G273500.1	Wheat	plastid	43.01	43.09
TraesCS5B01G302700.1	Wheat	vacuole	41.18	43.08
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.18	43.08
TraesCS7B01G026000.1	Wheat	cytosol	26.29	43.07
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	40.81	43.02
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.36	43.02
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.91	43.02
TraesCS1B01G456900.1	Wheat	vacuole	39.34	42.97
KXG20146	Sorghum	extracellular	42.1	42.96
HORVU2Hr1G000540.1	Barley	golgi, vacuole	42.83	42.91
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	32.72	42.89
PGSC0003DMT400009569	Potato	cytosol	37.5	42.86
TraesCS4B01G391900.1	Wheat	vacuole	40.26	42.77
Zm00001d046322_P001	Maize	extracellular	41.73	42.75
TraesCSU01G034600.1	Wheat	vacuole	40.44	42.72
TraesCS2B01G066900.1	Wheat	nucleus, unclear	41.36	42.69
TraesCS2D01G006000.1	Wheat	plastid	39.52	42.49
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	41.18	42.42
HORVU2Hr1G008300.1	Barley	plastid	40.99	42.4
Os06t0548200-01	Rice	extracellular	41.54	42.32
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	40.99	42.31
TraesCS7A01G126600.1	Wheat	vacuole	40.44	42.31
TraesCS2B01G016900.1	Wheat	vacuole	40.26	42.28
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	18.57	42.26
KXG26140	Sorghum	plasma membrane	41.54	42.24
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	40.07	42.17
TraesCS2A01G052800.1	Wheat	plastid, vacuole	40.62	42.1
TraesCS2A01G051500.1	Wheat	peroxisome	26.29	41.94
HORVU2Hr1G122590.1	Barley	vacuole	41.18	41.87
TraesCS2D01G052700.1	Wheat	unclear	40.62	41.86
KXG20147	Sorghum	vacuole	41.18	41.79
TraesCS2D01G052300.1	Wheat	plastid	40.44	41.75
TraesCS7B01G273900.1	Wheat	vacuole	39.89	41.73
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.89	41.73
TraesCS2A01G052600.1	Wheat	vacuole	40.81	41.73
TraesCS7D01G393900.1	Wheat	vacuole	40.07	41.68
TraesCS2B01G066800.1	Wheat	vacuole	40.44	41.67
TraesCS7B01G273800.1	Wheat	plasma membrane	39.89	41.65
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.89	41.57
TraesCS7A01G400100.1	Wheat	unclear	40.07	41.52
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	40.44	41.51
TraesCS3B01G070000.1	Wheat	mitochondrion	21.51	41.49
TraesCS2A01G052900.1	Wheat	unclear	40.26	41.48
Os06t0548800-01	Rice	extracellular	40.44	41.43
TraesCS2A01G542600.1	Wheat	vacuole	40.44	41.43
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.71	41.38
TraesCS7A01G353800.1	Wheat	vacuole	39.52	41.35
TraesCS2B01G572400.1	Wheat	unclear	40.26	41.32
TraesCS2B01G066400.1	Wheat	plastid	40.07	41.29
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.89	41.1
TraesCS7D01G472000.1	Wheat	vacuole	39.34	41.0
HORVU7Hr1G089190.1	Barley	vacuole	39.52	40.95
KXG28418	Sorghum	vacuole	39.71	40.91
Zm00001d049169_P001	Maize	vacuole	39.71	40.91
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.46	40.88
HORVU4Hr1G017270.1	Barley	vacuole	40.81	40.88
KXG20949	Sorghum	vacuole	40.62	40.85
TraesCS2A01G005700.1	Wheat	vacuole	37.13	40.81
TraesCS4A01G212100.1	Wheat	vacuole	40.62	40.77
TraesCS3A01G111600.1	Wheat	vacuole	39.71	40.68
EES13185	Sorghum	vacuole	40.81	40.66
TraesCS4B01G104000.1	Wheat	vacuole	40.62	40.62
HORVU7Hr1G093940.1	Barley	vacuole	39.52	40.57
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.44	40.52
TraesCS4D01G101000.1	Wheat	golgi	40.26	40.33
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	41.18	39.79
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.89	39.74
TraesCS2B01G145300.1	Wheat	plasma membrane	41.54	39.51
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.8	39.5
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	41.73	39.48
Os02t0235900-01	Rice	plasma membrane, vacuole	40.62	38.98
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	40.99	38.92
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	36.76	38.91
TraesCS2D01G543700.1	Wheat	unclear	39.71	38.5
TraesCS4B01G222500.1	Wheat	plasma membrane	39.89	38.34
TraesCS2D01G052400.1	Wheat	vacuole	28.31	38.31
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.62	38.17
Zm00001d016199_P001	Maize	mitochondrion	39.34	38.15
TraesCS4A01G081300.1	Wheat	unclear	39.34	37.88
TraesCS4D01G223000.1	Wheat	plasma membrane	39.34	37.81
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	39.89	37.35
KXG29886	Sorghum	mitochondrion	39.89	37.35
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.34	36.96
TraesCS2B01G145500.1	Wheat	vacuole	39.52	36.94
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	39.34	36.83
Os11t0495950-00	Rice	plasma membrane, vacuole	36.4	36.67
HORVU7Hr1G089210.1	Barley	mitochondrion	40.81	36.16
Zm00001d037009_P001	Maize	plasma membrane	38.6	35.84
KXG29885	Sorghum	plastid	32.54	35.33
HORVU7Hr1G026630.1	Barley	plastid	29.96	32.15
HORVU7Hr1G089260.1	Barley	mitochondrion	28.49	31.89

Protein Annotations

EntrezGene:102600867	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1BIX8	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400017976	PGSC:PGSC0003DMG400017976	EnsemblPlants:PGSC0003DMT400046308	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF34	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000295C959	RefSeq:XP_006360316.1
SEG:seg	:	:	:	:	:

Description

Reticuline oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400017976]

Coordinates

chr2:-:12948316..12950126

Molecular Weight (calculated)

61079.6 Da

IEP (calculated)

9.540

GRAVY (calculated)

-0.154

Length

544 amino acids

Sequence
(BLAST)

001: MSPSFLFFLL FLLKFNSLSS HASSPPPSVY DTFVNCLTIN SVPQSEISKI VYSPNDPSFN SILQAYIRNG RFFNSSTTSK PVIIVTPTVE SQVAGVVICT
101: KQTNLQLKIR SGGHDYEGIS YISDVPFIML DMFNLRSISI DTNDKTAWVQ TGAILGELYY NIWKKSEVLG FPAGVCPTVG VGGHVSGGGY GNMLRKFGLT
201: VDNVLDARLV DVNGRILDRK SMGEDLFWAI KGGGGASFGV ILAFQIQLVT VPQIVTYFRV ERFIEDNTTT DAVVQWQNVA SKIDNDLYMR LLIQPITVKA
301: KAKGAKSTKS IRATFIALFL GDSSRLMSLI SKEFPLLGLT KQDCLEMSWI DSVLHWANFD STTKPEALLN RKGDPLNYLK RKSDYVQTSI PKNGLESIFE
401: KMISLGKAGM VFNPYGGRMG EIAEGETPFP HRSGILFKIQ YSVNWHEEGL TAEKDYLSQI RDLYSFMTPY VSKNPRQAYL NYRDLDIGIN DQGPQSLEKG
501: RVYGTKYFKN NFDRLVKVKS MVDPQNFFRN EQSIPTLRKQ RKMF

Best Arabidopsis Sequence Match ( AT4G20840.1 )
(BLAST)

001: MIATQTFVSV FFFVFFLVSL PFFSSAAPPS SDSIYESFVQ CFSDKTKSPQ AQITDNVFSR TNPSFSSVLR AYIRNGRFNT SSTPKPAIIV TPRSDIHVSA
101: AVTCSKSLNF LLKIRSGGHD YEGLSYISDK PFFILDMSNL RDVSVDIADQ SAWISAGATL GEVYYRIWEK SKVHGFPAGV CPTVGVGGHI SGGGYGNMLR
201: KFGLSVDNLI DAKIVDVNGQ ILDRKSMGED LFWAISGGGG ASFGVVLGYK VKLVPVPETV TVFRVEKYMD SGAVDMVHKW QSVGPKTDRN LFLRMLIQPV
301: TRKKVKTVRA TVVALFLGRA EEVVALLGKE FPELSLKKEN CSEMTWFQSA LWWDNRVNPT QIDPKVFLDR NLDRANFGKR KSDYVASEIP RDGIESLFKK
401: MTELGKIGLV FNPYGGKMAE VTVNATPFPH RSKLFKIQYS VTWQENSVEI EKGFLNQANV LYSFMTGFVS KNPRNAYLNY RDVDIGVNDH GTNSYEEGEV
501: YGRKYFGDNF DRLVKVKTAA DPDNFFRNEQ SIPTVLSKA

Arabidopsis Description

Berberine bridge enzyme-like 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.