Factsheet for PGSC0003DMT400054387

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g070110.1.1	Tomato	extracellular, vacuole	91.89	91.89
PGSC0003DMT400054386	Potato	vacuole	83.96	83.65
PGSC0003DMT400054385	Potato	plastid	78.11	83.64
PGSC0003DMT400054571	Potato	cytosol	63.77	83.25
PGSC0003DMT400054564	Potato	cytosol, plastid	75.09	80.57
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.02	77.41
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	73.4	75.83
PGSC0003DMT400080465	Potato	cytosol	45.85	59.85
PGSC0003DMT400080467	Potato	vacuole	57.74	56.88
PGSC0003DMT400080468	Potato	vacuole	56.6	56.82
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	45.66	56.15
KRH58388	Soybean	vacuole	56.42	54.66
KRH58344	Soybean	vacuole	54.53	54.53
KRH42266	Soybean	vacuole	54.91	53.99
KRH58389	Soybean	nucleus	54.53	53.92
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	43.58	51.56
KRH58387	Soybean	plastid, vacuole	53.21	51.37
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	51.13	50.75
PGSC0003DMT400043091	Potato	extracellular	50.38	50.47
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	52.64	50.36
PGSC0003DMT400086243	Potato	vacuole	49.43	49.81
TraesCS1D01G443200.1	Wheat	cytosol	28.68	48.1
PGSC0003DMT400046308	Potato	extracellular	48.87	47.61
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.98	47.23
TraesCS2B01G172300.1	Wheat	vacuole	46.04	46.12
PGSC0003DMT400009569	Potato	cytosol	41.32	46.01
TraesCS7A01G354100.1	Wheat	vacuole	37.55	45.75
PGSC0003DMT400089776	Potato	golgi, vacuole	46.98	45.52
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	45.85	45.25
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.85	45.25
TraesCS1D01G338700.1	Wheat	plasma membrane	45.66	45.15
Zm00001d046322_P001	Maize	extracellular	45.09	45.01
TraesCS2D01G151500.1	Wheat	vacuole	44.91	44.99
TraesCS1B01G469800.1	Wheat	vacuole	45.66	44.98
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	44.72	44.8
PGSC0003DMT400057528	Potato	extracellular	45.47	44.8
KXG20146	Sorghum	extracellular	44.91	44.65
HORVU1Hr1G092680.1	Barley	golgi, vacuole	44.91	44.4
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.3	44.29
TraesCS1D01G433600.1	Wheat	vacuole	45.09	44.26
TraesCS1B01G456900.1	Wheat	vacuole	41.51	44.18
HORVU7Hr1G089270.1	Barley	vacuole	43.96	43.8
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.96	43.8
TraesCS1A01G424100.1	Wheat	vacuole	42.08	43.73
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	45.66	43.68
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.64	43.63
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	44.15	43.49
TraesCS5D01G268800.1	Wheat	vacuole	43.02	43.43
TraesCS5A01G261400.1	Wheat	vacuole	42.83	43.24
Zm00001d046319_P001	Maize	vacuole	42.83	43.16
Os06t0548100-00	Rice	golgi	43.4	42.99
EER89907	Sorghum	plasma membrane, vacuole	42.64	42.97
PGSC0003DMT400012979	Potato	cytosol	32.26	42.96
TraesCS7D01G368700.1	Wheat	unclear	41.89	42.94
TraesCS7B01G273700.1	Wheat	vacuole	42.08	42.88
TraesCS2B01G017300.1	Wheat	plastid	33.02	42.79
TraesCS7A01G353900.1	Wheat	vacuole	41.89	42.77
Os06t0548800-01	Rice	extracellular	42.83	42.75
TraesCS7A01G354000.1	Wheat	vacuole	41.7	42.75
Zm00001d046318_P001	Maize	vacuole	42.64	42.56
TraesCS7B01G273600.1	Wheat	vacuole	41.51	42.55
EER89910	Sorghum	vacuole	42.45	42.53
TraesCS2A01G051500.1	Wheat	peroxisome	27.36	42.52
TraesCS7D01G368800.1	Wheat	vacuole	41.7	42.5
TraesCS7D01G393900.1	Wheat	vacuole	41.89	42.45
HORVU7Hr1G089160.3	Barley	vacuole	41.89	42.29
Os06t0549300-00	Rice	extracellular	41.7	42.26
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	40.94	42.22
Os06t0549600-01	Rice	extracellular	41.89	42.21
KXG20147	Sorghum	vacuole	42.64	42.16
Os06t0548200-01	Rice	extracellular	42.45	42.13
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.32	42.12
EER89908	Sorghum	plasma membrane, vacuole	42.83	42.12
TraesCS7A01G126600.1	Wheat	vacuole	41.13	41.92
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	44.53	41.92
TraesCS7A01G400100.1	Wheat	unclear	41.51	41.9
TraesCS7B01G026000.1	Wheat	cytosol	26.23	41.87
Os06t0549633-00	Rice	vacuole	41.7	41.86
Os06t0549900-01	Rice	extracellular	41.7	41.86
HORVU4Hr1G017270.1	Barley	vacuole	42.83	41.8
TraesCS2D01G052300.1	Wheat	plastid	41.51	41.75
HORVU2Hr1G122590.1	Barley	vacuole	42.08	41.68
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	44.34	41.59
EER89909	Sorghum	extracellular, plasma membrane, vacuole	41.13	41.44
Zm00001d037005_P001	Maize	vacuole	40.94	41.41
KXG20949	Sorghum	vacuole	42.26	41.4
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	40.38	41.39
TraesCS7B01G273900.1	Wheat	vacuole	40.57	41.35
TraesCS2B01G572400.1	Wheat	unclear	41.32	41.32
TraesCS2B01G066400.1	Wheat	plastid	41.13	41.29
HORVU2Hr1G008300.1	Barley	plastid	40.94	41.25
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.13	41.13
HORVU7Hr1G093940.1	Barley	vacuole	41.13	41.13
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	40.38	41.0
TraesCS4B01G358600.1	Wheat	golgi	40.38	40.92
TraesCS2A01G052900.1	Wheat	unclear	40.75	40.91
Zm00001d037008_P001	Maize	golgi, vacuole	39.43	40.9
TraesCS7B01G273500.1	Wheat	plastid	41.89	40.88
TraesCS5D01G309100.1	Wheat	vacuole	40.19	40.88
TraesCS7B01G273800.1	Wheat	plasma membrane	40.19	40.88
TraesCS2A01G542600.1	Wheat	vacuole	40.94	40.87
HORVU2Hr1G008270.1	Barley	peroxisome	23.96	40.84
TraesCS4B01G391900.1	Wheat	vacuole	39.43	40.82
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	40.19	40.8
TraesCS2B01G066900.1	Wheat	nucleus, unclear	40.57	40.8
TraesCS2A01G052600.1	Wheat	vacuole	40.94	40.79
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	39.62	40.7
TraesCS7D01G472000.1	Wheat	vacuole	40.0	40.61
TraesCSU01G034600.1	Wheat	vacuole	39.43	40.58
TraesCS7A01G353800.1	Wheat	vacuole	39.81	40.58
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.62	40.38
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	39.81	40.34
KXG28418	Sorghum	vacuole	40.19	40.34
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.19	40.34
EES13185	Sorghum	vacuole	41.51	40.29
TraesCS2A01G052800.1	Wheat	plastid, vacuole	39.81	40.19
KXG26140	Sorghum	plasma membrane	40.57	40.19
TraesCS2D01G052700.1	Wheat	unclear	40.0	40.15
Zm00001d049169_P001	Maize	vacuole	40.0	40.15
TraesCS2D01G006000.1	Wheat	plastid	38.3	40.12
HORVU7Hr1G089190.1	Barley	vacuole	39.62	40.0
TraesCS5B01G302700.1	Wheat	vacuole	39.06	39.81
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.75	39.78
TraesCS4A01G212100.1	Wheat	vacuole	40.57	39.67
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	39.62	39.62
TraesCS2B01G066800.1	Wheat	vacuole	39.43	39.58
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	39.43	39.58
TraesCS2B01G016900.1	Wheat	vacuole	38.68	39.58
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.25	39.47
TraesCS2D01G543700.1	Wheat	unclear	41.7	39.39
TraesCS4B01G104000.1	Wheat	vacuole	40.38	39.34
TraesCS4D01G101000.1	Wheat	golgi	40.19	39.23
TraesCS4B01G222500.1	Wheat	plasma membrane	41.89	39.22
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.0	39.04
Os02t0235900-01	Rice	plasma membrane, vacuole	41.7	38.98
TraesCS4A01G081300.1	Wheat	unclear	41.51	38.94
TraesCS4D01G223000.1	Wheat	plasma membrane	41.51	38.87
HORVU2Hr1G013930.1	Barley	golgi, vacuole	40.0	38.83
TraesCS3A01G111600.1	Wheat	vacuole	38.87	38.79
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	42.26	38.55
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.36	38.49
TraesCS2A01G005700.1	Wheat	vacuole	35.85	38.38
Zm00001d016199_P001	Maize	mitochondrion	40.57	38.32
TraesCS3B01G070000.1	Wheat	mitochondrion	20.38	38.3
TraesCS2B01G145300.1	Wheat	plasma membrane	41.32	38.29
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	41.13	38.05
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.13	37.65
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.75	37.57
TraesCS2D01G052400.1	Wheat	vacuole	28.49	37.56
Os11t0495950-00	Rice	plasma membrane, vacuole	37.92	37.22
KXG29886	Sorghum	mitochondrion	40.38	36.83
TraesCS2B01G145500.1	Wheat	vacuole	40.0	36.43
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	39.81	36.32
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.62	36.27
Zm00001d037009_P001	Maize	plasma membrane	40.0	36.18
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.81	36.07
KXG29885	Sorghum	plastid	33.58	35.53
HORVU7Hr1G089210.1	Barley	mitochondrion	40.57	35.02
HORVU7Hr1G026630.1	Barley	plastid	30.94	32.35
HORVU7Hr1G089260.1	Barley	mitochondrion	29.25	31.89

Protein Annotations

EntrezGene:102593264	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1BW87	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400021109	PGSC:PGSC0003DMG400021109	EnsemblPlants:PGSC0003DMT400054387	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF30	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000295DB84	RefSeq:XP_006352996.1
SEG:seg	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021109]

Coordinates

chr2:-:29317496..29319262

Molecular Weight (calculated)

60092.6 Da

IEP (calculated)

8.389

GRAVY (calculated)

-0.232

Length

530 amino acids

Sequence
(BLAST)

001: MTTFKKLTIF LFLSVCLSSS WANTTLHDDF LECLSHKIMN SNSISQVIYT PKNSSYSTLY NSFSSNLRIT SDFKPSIIFT PNDESQIQAA IYCSKKHGLQ
101: IRIRGGGHDY EGLSYISETP FVIIDLRNLR SISIDTEDKT AWIQAGATLG EVYYRIAEKS KKLAFVAGVC PTVGVGGHFS GGGYGMMSRK FGTAADNIID
201: AKLIDANGRI LDRKSMGEDL FWAIRGGGGT SFGLIISWKV KLLDIPEKVT VFNVTRTLEQ NATQLVYKWQ YIADKVDDNL LLRVFLGSSE SPFQRGQRTV
301: HAFFTTMFVG GVDDLLHEMQ DSFPELGLVK EDCIEMSWIE SILFFVGFPR GTSIDVLLDW NNSTYQTGFF KGKSDYVQRP ISINGLEGIW KLFNQVGEYS
401: AELQFSPYGG KLSDISQSET PFPHRDGNIF MIHYGVNWRE MESSNKHLSW IRNLYGYMAR YVSKSPRAAY FNYRDLDLGV NNKGNTSYEQ ARIWGVKYFK
501: NNFDRLVKIK TKIDPTNFFR NEQSIPPLLS

Best Arabidopsis Sequence Match ( AT5G44440.1 )
(BLAST)

001: MEFSSFLFTI LLFSLNISPL VSAHGSNHED FLKCLSYRMN DNTVEPKVIH TSKDSSFFSI LDSSIQNPRF SVSETPKPVS IITPVKASDV QTVIRCAQLH
101: GIHVRTRSAG HCYEGLSYIA YNKPFAVIDL RNLRSISLDV DNRTGWVQTG ATAGELYYEI GKTTKSLAFP AGIHPTVGVG GQFSGGGYGT LLRKYGLAAD
201: NIIDALVVDA SGRILDRQAM GEDYFWAIRG GGGSSFGVIL SWKVKLVDVP STITVFKVQK TSKKEAVRII KKWQYAADKV PDDLFIRTTL ERSNKNAVHA
301: LFTGLYIGPV NNLLALMEEK FPELGLEKEG CEEMSWIESV LWFADFPKGE SLGVLTNRER TSLSFKGKDD FVQEPIPEAA IQEIWRRLEA PEARLGKIIL
401: TPFGGKMSEM AEYETPFPHR GGNLYEIQYV AYWREEEDKN KTETDKYLKW VDSVYEFMTP YVSKSPRGAY VNFKDMDLGM YLGKKKTKYE EGKSWGVKYF
501: KNNFERLVRV KTRVDPTDFF CDEQSIPLVN KVT

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44440]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.