Factsheet for PGSC0003DMT400057523

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi, vacuole

Predictor Summary:

plastid 1
extracellular 5
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, plastid, secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	93.61	93.94
PGSC0003DMT400057528	Potato	extracellular	64.48	67.47
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	64.65	65.7
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	60.21	63.13
PGSC0003DMT400012979	Potato	cytosol	43.16	61.06
PGSC0003DMT400080465	Potato	cytosol	34.28	47.54
PGSC0003DMT400086243	Potato	vacuole	43.52	46.58
PGSC0003DMT400054571	Potato	cytosol	33.39	46.31
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	42.63	45.98
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	42.45	45.79
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	42.45	45.79
CDX79034	Canola	plastid	42.27	45.68
PGSC0003DMT400054385	Potato	plastid	40.14	45.66
CDX82800	Canola	extracellular	41.92	45.21
PGSC0003DMT400054564	Potato	cytosol, plastid	39.61	45.14
Bra013501.1-P	Field mustard	vacuole	42.27	44.74
AT4G20860.1	Thale cress	vacuole	42.1	44.72
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	41.92	44.53
PGSC0003DMT400080467	Potato	vacuole	42.45	44.42
PGSC0003DMT400054386	Potato	vacuole	41.92	44.36
PGSC0003DMT400080468	Potato	vacuole	41.39	44.13
TraesCS1D01G443200.1	Wheat	cytosol	24.69	43.99
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	34.99	43.97
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	33.57	43.85
CDX79010	Canola	cytosol	20.78	43.82
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.89	43.25
Bra033740.1-P	Field mustard	golgi	41.74	42.96
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	16.7	42.92
AT5G44360.2	Thale cress	golgi	41.03	42.15
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	38.37	42.11
KXG20146	Sorghum	extracellular	39.79	42.03
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	41.21	41.88
TraesCS7A01G354100.1	Wheat	vacuole	32.33	41.84
TraesCS2B01G172300.1	Wheat	vacuole	38.9	41.4
Zm00001d046322_P001	Maize	extracellular	38.9	41.24
PGSC0003DMT400009569	Potato	cytosol	34.81	41.18
PGSC0003DMT400046308	Potato	extracellular	39.79	41.18
CDY68914	Canola	golgi, plastid	31.62	41.11
TraesCS1D01G338700.1	Wheat	plasma membrane	39.08	41.04
PGSC0003DMT400043091	Potato	extracellular	38.54	41.02
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	38.9	41.01
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.08	40.97
TraesCS1B01G456900.1	Wheat	vacuole	36.23	40.96
TraesCS7B01G026000.1	Wheat	cytosol	24.16	40.96
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	37.48	40.73
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	30.02	40.72
HORVU7Hr1G089270.1	Barley	vacuole	38.37	40.6
TraesCS1D01G433600.1	Wheat	vacuole	38.9	40.56
TraesCS2D01G151500.1	Wheat	vacuole	38.01	40.45
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	38.01	40.45
TraesCS1B01G469800.1	Wheat	vacuole	38.54	40.33
TraesCS1A01G424100.1	Wheat	vacuole	36.41	40.2
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	37.66	39.85
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	16.87	39.75
Zm00001d046319_P001	Maize	vacuole	37.12	39.73
HORVU1Hr1G092680.1	Barley	golgi, vacuole	37.66	39.55
EER89907	Sorghum	plasma membrane, vacuole	36.94	39.54
TraesCS5D01G268800.1	Wheat	vacuole	36.77	39.43
Os06t0548800-01	Rice	extracellular	37.12	39.36
Os06t0548100-00	Rice	golgi	37.3	39.25
TraesCS5A01G261400.1	Wheat	vacuole	36.59	39.24
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	37.48	39.22
KXG20147	Sorghum	vacuole	37.3	39.18
EER89910	Sorghum	vacuole	36.77	39.13
PGSC0003DMT400089776	Potato	golgi, vacuole	38.01	39.12
TraesCS2B01G017300.1	Wheat	plastid	28.42	39.12
TraesCS7B01G273900.1	Wheat	vacuole	35.7	38.65
Os06t0549633-00	Rice	vacuole	36.23	38.64
EER89909	Sorghum	extracellular, plasma membrane, vacuole	36.06	38.59
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	35.52	38.46
TraesCS2A01G051500.1	Wheat	peroxisome	23.27	38.42
Os06t0548200-01	Rice	extracellular	36.41	38.39
TraesCS7B01G273800.1	Wheat	plasma membrane	35.52	38.39
TraesCS4B01G222500.1	Wheat	plasma membrane	38.54	38.34
TraesCS7A01G353800.1	Wheat	vacuole	35.35	38.27
Os06t0549900-01	Rice	extracellular	35.88	38.26
Zm00001d037005_P001	Maize	vacuole	35.52	38.17
TraesCS4D01G223000.1	Wheat	plasma membrane	38.19	37.99
TraesCS3B01G070000.1	Wheat	mitochondrion	19.01	37.94
TraesCS7B01G273500.1	Wheat	plastid	36.59	37.94
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	35.17	37.93
HORVU7Hr1G089190.1	Barley	vacuole	35.35	37.9
TraesCS7A01G126600.1	Wheat	vacuole	34.99	37.88
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	34.99	37.88
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	34.99	37.74
TraesCS7D01G472000.1	Wheat	vacuole	34.99	37.74
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	37.83	37.7
Zm00001d046318_P001	Maize	vacuole	35.52	37.66
Os02t0235900-01	Rice	plasma membrane, vacuole	37.83	37.57
KXG20949	Sorghum	vacuole	36.06	37.52
TraesCS4A01G081300.1	Wheat	unclear	37.66	37.52
EER89908	Sorghum	plasma membrane, vacuole	35.88	37.48
TraesCS7A01G353900.1	Wheat	vacuole	34.46	37.38
TraesCS7A01G354000.1	Wheat	vacuole	34.28	37.33
TraesCS7D01G368700.1	Wheat	unclear	34.1	37.14
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	34.64	37.0
Zm00001d037008_P001	Maize	golgi, vacuole	33.57	36.99
HORVU2Hr1G008270.1	Barley	peroxisome	20.43	36.98
Os06t0549300-00	Rice	extracellular	34.28	36.9
Os06t0549600-01	Rice	extracellular	34.46	36.88
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.01	36.83
EES13185	Sorghum	vacuole	35.7	36.81
TraesCS7B01G273700.1	Wheat	vacuole	33.93	36.73
TraesCS3A01G111600.1	Wheat	vacuole	34.64	36.72
HORVU2Hr1G000540.1	Barley	golgi, vacuole	35.35	36.65
TraesCS7B01G273600.1	Wheat	vacuole	33.57	36.56
KXG28418	Sorghum	vacuole	34.28	36.55
TraesCS2B01G066800.1	Wheat	vacuole	34.28	36.55
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	34.28	36.55
Zm00001d049169_P001	Maize	vacuole	34.28	36.55
TraesCS7D01G393900.1	Wheat	vacuole	33.93	36.52
TraesCS2D01G052300.1	Wheat	plastid	34.1	36.43
HORVU7Hr1G089160.3	Barley	vacuole	33.93	36.38
TraesCS7A01G400100.1	Wheat	unclear	33.93	36.38
TraesCS2D01G006000.1	Wheat	plastid	32.68	36.36
Zm00001d016199_P001	Maize	mitochondrion	36.23	36.36
TraesCS2A01G542600.1	Wheat	vacuole	34.28	36.35
TraesCS7D01G368800.1	Wheat	vacuole	33.57	36.35
TraesCS2B01G016900.1	Wheat	vacuole	33.39	36.29
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	34.1	36.23
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	33.04	36.19
TraesCS2A01G052800.1	Wheat	plastid, vacuole	33.57	36.0
TraesCS2B01G066400.1	Wheat	plastid	33.75	35.98
TraesCS4B01G391900.1	Wheat	vacuole	32.68	35.94
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	32.86	35.85
TraesCS2B01G572400.1	Wheat	unclear	33.75	35.85
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.57	35.8
TraesCSU01G034600.1	Wheat	vacuole	32.68	35.73
KXG26140	Sorghum	plasma membrane	33.93	35.7
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	33.57	35.66
TraesCS5B01G302700.1	Wheat	vacuole	32.86	35.58
TraesCS2A01G052600.1	Wheat	vacuole	33.57	35.53
TraesCS2B01G066900.1	Wheat	nucleus, unclear	33.21	35.48
HORVU7Hr1G093940.1	Barley	vacuole	33.39	35.47
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	32.5	35.4
HORVU4Hr1G017270.1	Barley	vacuole	34.1	35.36
TraesCS5D01G309100.1	Wheat	vacuole	32.68	35.32
TraesCS4B01G358600.1	Wheat	golgi	32.68	35.18
HORVU2Hr1G008300.1	Barley	plastid	32.86	35.17
HORVU2Hr1G122590.1	Barley	vacuole	33.39	35.14
KXG29886	Sorghum	mitochondrion	36.23	35.11
TraesCS2A01G052900.1	Wheat	unclear	32.68	34.85
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	32.33	34.8
TraesCS4A01G212100.1	Wheat	vacuole	33.39	34.69
TraesCS2D01G052700.1	Wheat	unclear	32.5	34.66
TraesCS2A01G005700.1	Wheat	vacuole	30.37	34.55
Os11t0495950-00	Rice	plasma membrane, vacuole	33.04	34.44
TraesCS4D01G101000.1	Wheat	golgi	33.21	34.44
TraesCS2D01G543700.1	Wheat	unclear	34.28	34.4
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	34.99	34.38
TraesCS2B01G145300.1	Wheat	plasma membrane	34.81	34.27
HORVU2Hr1G008310.1	Barley	golgi, vacuole	33.04	34.25
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	35.35	34.25
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	35.17	34.2
TraesCS2B01G145500.1	Wheat	vacuole	35.35	34.19
HORVU2Hr1G013930.1	Barley	golgi, vacuole	33.04	34.07
TraesCS2D01G126400.1	Wheat	golgi, vacuole	34.81	33.85
TraesCS4B01G104000.1	Wheat	vacuole	32.5	33.64
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	34.1	33.39
Zm00001d037009_P001	Maize	plasma membrane	34.28	32.94
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	25.58	32.88
HORVU7Hr1G089210.1	Barley	mitochondrion	35.7	32.74
KXG29885	Sorghum	plastid	28.95	32.53
TraesCS2D01G052400.1	Wheat	vacuole	22.91	32.09
HORVU7Hr1G026630.1	Barley	plastid	28.24	31.36
HORVU7Hr1G089260.1	Barley	mitochondrion	24.69	28.6

Protein Annotations

EntrezGene:102604951	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1C185	InterPro:Oxid_FAD_bind_N
InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400022343	PGSC:PGSC0003DMG400022343	EnsemblPlants:PGSC0003DMT400057523
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	SignalP:SignalP-noTM
UniParc:UPI00029530F9	RefSeq:XP_006347166.1	SEG:seg	:	:	:

Description

FAD-linked oxidoreductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022343]

Coordinates

chr2:-:35154416..35156326

Molecular Weight (calculated)

64620.7 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.230

Length

563 amino acids

Sequence
(BLAST)

001: MGNFQLLFVL ILSFFLSQFY AQESFLHCIS SQFSESNITG VLIYAPKSPA YSSIIEHAQK NPRWLNSSSA HPLLIIVPRK ENELKPVILC SKKFDLQIRV
101: LGGGHDYEGL SFRAESRFIM IDMSNLNEID IDLEEEVAWI QAGATLGQLY YEIAKKSRVH AFPGGICYTT GSGGLISGGG LGSLMRKFGL AADNVVDARV
201: MDVNGRILDR KSMGEDFFWA IRGGGGSSFG IILAWKLKLV HVPEKVSVFR VHRMLEGNAI NLLQQWQHTS YLLPKEFFLR MIMQNDGERN EKKVKVTFEG
301: LFLGTVDELI PIVSDKFPEF NLEIKDFFQE PVINCTERPC LKKECHEVPW IGSVLFLYNK EVDESLEVLL DNSVPVYKNY FKGTSDFVKT PIPDKGWKMI
401: ERLFLEEDRP MIIVEPLSGR IDEFSESELP FPHRKGNLYN IQHLVNWNDN SENVSSKKIG WMRKFYKEME PFVANSPRTA YTNYRDLDFG TNQEDYSYSK
501: AKIWGEKYFK GNFERLAKVK SMVDPENFFR YQQSIPPFAT PGLMNLIEEA WPSTYIPSEL QVF

Best Arabidopsis Sequence Match ( AT2G34790.1 )
(BLAST)

001: MAFAISKRNA TLFLVTLLLI SVPLSSSTLQ QDFVKCLVDN SDVSFPITAS FFSPDQNATL FKEELESTAQ NLRYLTPSNP KPVFIFEPLY ETHVQAAVVC
101: AKKLQLHLRL RSGGHDYEGL SFVAEDETPF VIVDLSKLRQ VDVDLDSNSA WAHAGATIGE VYYRIQEKSQ THGFPAGLCS SLGIGGHLVG GAYGSMMRKF
201: GLGADNVLDA RIVDANGQIL DRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPATVTV FTVTKTLEQD GTKVLYKWEQ IADKLDDDLF IRVIISPASK
301: TTKPGNRTIS MSYQAQFLGD SNRLLQVMQK SFPELGLTKK DCTEMSWIKS VMYIAGFPNS AAPEALLAGK SLFKNHFKAK SDFVKEPIPV EGLEGLWERF
401: LEEDSPLTIW NPYGGMMSRI SESEIPFPHR NGTLFKIQWL STWQDGKVSE ERHMKWIREM YSYMEQYVSK NPRQAYVNYR DLDLGTNEGE TDAREWGAKY
501: YKGNFERLVK IKGEFDPDNF FRHEQSVPTK IG

Arabidopsis Description

MEE23Berberine bridge enzyme-like 15 [Source:UniProtKB/Swiss-Prot;Acc:O64743]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.