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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • peroxisome 1
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:secretory
EpiLoc:peroxisome
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400057523 Potato extracellular, golgi, vacuole 93.94 93.61
Solyc02g079440.1.1 Tomato nucleus 61.5 64.13
Solyc02g079470.1.1 Tomato endoplasmic reticulum, vacuole 59.54 61.97
Solyc02g079460.1.1 Tomato extracellular, golgi, vacuole 57.75 60.9
Solyc02g079450.1.1 Tomato extracellular 58.29 60.89
Solyc02g070060.1.1 Tomato vacuole 43.67 46.58
CDX82785 Canola endoplasmic reticulum, extracellular, vacuole 42.96 46.17
CDY69774 Canola endoplasmic reticulum, extracellular, plastid, vacuole 42.96 46.17
Bra013478.1-P Field mustard endoplasmic reticulum, vacuole 42.78 45.98
CDX79034 Canola plastid 42.6 45.87
CDX82800 Canola extracellular 42.42 45.59
Bra013501.1-P Field mustard vacuole 42.6 44.92
Solyc02g070110.1.1 Tomato extracellular, vacuole 42.42 44.91
Solyc06g065060.1.1 Tomato extracellular 42.96 44.8
AT4G20860.1 Thale cress vacuole 42.25 44.72
CDX79010 Canola cytosol 21.21 44.57
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 35.47 44.42
Solyc06g065070.1.1 Tomato vacuole 42.25 44.22
Solyc10g054480.1.1 Tomato plastid 23.89 44.08
Solyc02g070200.1.1 Tomato vacuole 42.42 43.99
Solyc02g070130.1.1 Tomato vacuole 41.53 43.71
Bra033740.1-P Field mustard golgi 42.6 43.69
Solyc02g070170.1.1 Tomato extracellular, vacuole 41.18 43.18
Solyc02g070070.1.1 Tomato extracellular 40.82 43.13
TraesCS1D01G443200.1 Wheat cytosol 24.24 43.04
AT5G44360.2 Thale cress golgi 41.89 42.88
Solyc02g070180.1.1 Tomato plasma membrane, vacuole 41.18 42.78
Solyc09g072660.2.1 Tomato extracellular 41.71 42.62
CDY68914 Canola golgi, plastid 32.09 41.57
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 16.22 41.55
TraesCS7A01G354100.1 Wheat vacuole 31.91 41.15
KXG20146 Sorghum extracellular 39.04 41.09
TraesCS7B01G026000.1 Wheat cytosol 24.06 40.66
TraesCS2B01G172300.1 Wheat vacuole 38.15 40.45
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 37.25 40.35
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 29.77 40.24
Solyc02g069690.1.1 Tomato golgi, vacuole 39.22 40.22
Zm00001d046322_P001 Maize extracellular 37.97 40.11
HORVU7Hr1G089270.1 Barley vacuole 37.97 40.04
TraesCS1D01G338700.1 Wheat plasma membrane 38.15 39.93
TraesCS7D01G369200.1 Wheat extracellular, vacuole 37.61 39.89
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 38.15 39.85
TraesCS1B01G456900.1 Wheat vacuole 35.12 39.56
TraesCS2D01G151500.1 Wheat vacuole 37.25 39.51
TraesCS1D01G433600.1 Wheat vacuole 37.97 39.44
TraesCS1A01G424100.1 Wheat vacuole 35.83 39.41
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 16.76 39.33
TraesCS7A01G353700.1 Wheat extracellular, vacuole 37.25 39.29
TraesCS1B01G469800.1 Wheat vacuole 37.43 39.03
Zm00001d046319_P001 Maize vacuole 36.54 38.97
Solyc02g070090.1.1 Tomato extracellular 37.08 38.95
TraesCS2B01G017300.1 Wheat plastid 28.34 38.88
TraesCS5D01G268800.1 Wheat vacuole 36.36 38.86
Solyc02g022850.1.1 Tomato vacuole 37.43 38.82
HORVU1Hr1G092680.1 Barley golgi, vacuole 37.08 38.81
KXG20147 Sorghum vacuole 37.08 38.81
EER89907 Sorghum plasma membrane, vacuole 36.36 38.78
EER89909 Sorghum extracellular, plasma membrane, vacuole 36.36 38.78
EER89910 Sorghum vacuole 36.54 38.75
TraesCS5A01G261400.1 Wheat vacuole 36.19 38.67
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 37.08 38.66
Os06t0548800-01 Rice extracellular 36.54 38.61
Os06t0548100-00 Rice golgi 36.72 38.5
TraesCS2A01G051500.1 Wheat peroxisome 23.35 38.42
TraesCS4B01G222500.1 Wheat plasma membrane 38.68 38.34
TraesCS3B01G070000.1 Wheat mitochondrion 19.25 38.3
Zm00001d037005_P001 Maize vacuole 35.65 38.17
TraesCS7B01G273900.1 Wheat vacuole 35.29 38.08
Os06t0549633-00 Rice vacuole 35.83 38.07
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 35.12 37.88
Os06t0548200-01 Rice extracellular 36.01 37.83
TraesCS4D01G223000.1 Wheat plasma membrane 38.15 37.81
TraesCS7A01G353800.1 Wheat vacuole 34.94 37.69
TraesCS7D01G369000.1 Wheat extracellular, vacuole 34.94 37.69
TraesCS7B01G273800.1 Wheat plasma membrane 34.94 37.62
TraesCS7B01G273500.1 Wheat plastid 36.36 37.57
TraesCS4A01G081300.1 Wheat unclear 37.79 37.52
Os06t0549900-01 Rice extracellular 35.29 37.5
TraesCS7A01G126600.1 Wheat vacuole 34.58 37.31
Zm00001d046318_P001 Maize vacuole 35.29 37.29
TraesCS7A01G353900.1 Wheat vacuole 34.4 37.19
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 37.43 37.17
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 34.58 37.16
HORVU7Hr1G089190.1 Barley vacuole 34.76 37.14
TraesCS7B01G273700.1 Wheat vacuole 34.4 37.12
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 34.76 37.0
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 34.4 36.97
TraesCS7D01G472000.1 Wheat vacuole 34.4 36.97
KXG20949 Sorghum vacuole 35.65 36.97
EER89908 Sorghum plasma membrane, vacuole 35.47 36.92
Solyc04g080400.1.1 Tomato extracellular 37.08 36.88
Os02t0235900-01 Rice plasma membrane, vacuole 37.25 36.86
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 38.15 36.83
TraesCS7D01G368800.1 Wheat vacuole 34.05 36.73
TraesCS7D01G393900.1 Wheat vacuole 34.22 36.71
Os06t0549600-01 Rice extracellular 34.4 36.69
HORVU2Hr1G008270.1 Barley peroxisome 20.32 36.66
EES13185 Sorghum vacuole 35.65 36.63
Os06t0549300-00 Rice extracellular 34.05 36.52
HORVU2Hr1G000540.1 Barley golgi, vacuole 35.29 36.46
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 34.22 36.36
TraesCS7A01G354000.1 Wheat vacuole 33.51 36.36
TraesCS2A01G542600.1 Wheat vacuole 34.4 36.35
TraesCS3A01G111600.1 Wheat vacuole 34.4 36.35
TraesCS2D01G052300.1 Wheat plastid 34.05 36.24
Zm00001d037008_P001 Maize golgi, vacuole 32.98 36.2
TraesCS7A01G400100.1 Wheat unclear 33.87 36.19
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 33.16 36.19
Zm00001d016199_P001 Maize mitochondrion 36.19 36.19
KXG28418 Sorghum vacuole 34.05 36.17
TraesCS2B01G066400.1 Wheat plastid 34.05 36.17
TraesCS7D01G368700.1 Wheat unclear 33.33 36.17
TraesCS2D01G006000.1 Wheat plastid 32.62 36.17
TraesCS2B01G016900.1 Wheat vacuole 33.33 36.1
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 34.05 36.04
Zm00001d049169_P001 Maize vacuole 33.87 35.98
TraesCS2B01G572400.1 Wheat unclear 33.87 35.85
HORVU7Hr1G089160.3 Barley vacuole 33.51 35.81
TraesCS2B01G066800.1 Wheat vacuole 33.69 35.8
TraesCS7B01G273600.1 Wheat vacuole 32.8 35.59
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 33.51 35.47
KXG29886 Sorghum mitochondrion 36.72 35.46
TraesCS5B01G302700.1 Wheat vacuole 32.8 35.38
HORVU4Hr1G017270.1 Barley vacuole 34.22 35.36
TraesCS4B01G391900.1 Wheat vacuole 32.26 35.35
KXG26140 Sorghum plasma membrane 33.69 35.33
HORVU7Hr1G093940.1 Barley vacuole 33.33 35.28
TraesCS2A01G052800.1 Wheat plastid, vacuole 32.98 35.24
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 32.44 35.2
TraesCSU01G034600.1 Wheat vacuole 32.26 35.15
TraesCS5D01G309100.1 Wheat vacuole 32.62 35.12
TraesCS2B01G066900.1 Wheat nucleus, unclear 32.98 35.1
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 32.98 35.04
TraesCS2A01G052600.1 Wheat vacuole 33.16 34.96
HORVU2Hr1G122590.1 Barley vacuole 33.33 34.95
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 32.09 34.88
HORVU2Hr1G008300.1 Barley plastid 32.62 34.79
TraesCS4A01G212100.1 Wheat vacuole 33.51 34.69
TraesCS2D01G052700.1 Wheat unclear 32.44 34.47
TraesCS4D01G101000.1 Wheat golgi 33.33 34.44
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 32.09 34.42
TraesCS4B01G358600.1 Wheat golgi 32.09 34.42
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 35.12 34.38
TraesCS2A01G005700.1 Wheat vacuole 30.3 34.34
TraesCS2A01G052900.1 Wheat unclear 32.26 34.28
TraesCS2D01G543700.1 Wheat unclear 34.22 34.22
TraesCS2B01G145300.1 Wheat plasma membrane 34.76 34.09
Os11t0495950-00 Rice plasma membrane, vacuole 32.8 34.07
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 35.12 34.02
TraesCS4B01G104000.1 Wheat vacuole 32.62 33.64
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 34.76 33.56
HORVU2Hr1G008310.1 Barley golgi, vacuole 32.44 33.52
HORVU2Hr1G013930.1 Barley golgi, vacuole 32.44 33.33
TraesCS2B01G145500.1 Wheat vacuole 34.58 33.33
TraesCS2D01G126400.1 Wheat golgi, vacuole 34.4 33.33
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 34.05 33.22
Zm00001d037009_P001 Maize plasma membrane 34.22 32.76
KXG29885 Sorghum plastid 29.06 32.53
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 25.31 32.42
HORVU7Hr1G089210.1 Barley mitochondrion 34.94 31.92
TraesCS2D01G052400.1 Wheat vacuole 22.46 31.34
HORVU7Hr1G026630.1 Barley plastid 28.16 31.16
HORVU7Hr1G089260.1 Barley mitochondrion 24.06 27.78
Protein Annotations
Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1InterPro:BBEInterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016614GO:GO:0050660GO:GO:0055114
GO:GO:0071949InterPro:IPR016166InterPro:IPR016167UniProt:K4B9H1InterPro:Oxid_FAD_bind_NInterPro:Oxy_OxRdtase_FAD_BS
PFAM:PF01565PFAM:PF08031ScanProsite:PS00862PFscan:PS51387PANTHER:PTHR32448PANTHER:PTHR32448:SF36
SUPFAM:SSF56176SignalP:SignalP-noTMEnsemblPlantsGene:Solyc02g079480.1EnsemblPlants:Solyc02g079480.1.1UniParc:UPI0002768A39SEG:seg
Description
No Description!
Coordinates
chr2:-:44017361..44019046
Molecular Weight (calculated)
64449.6 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.272
Length
561 amino acids
Sequence
(BLAST)
001: MRNFQLLFVL LLLSFFLSQC ESFLHCISSQ FSESNSTGVL MYAPKSSTYS SIIEHAQKNP RWLNSSSAHP LLIIVPRKEN ELKPVILCSK KFDLQIRVLG
101: GGHDYEGLSF RAESQFIMID MSSLDEIDID LEKEVAWIQA GATLGKLYYD IAKKSRVHAF PGGICYTTGS GGLISGGGLG SLMRKFGLAA DNVVDARVMD
201: VNGRILDRKS MGEDFFWAIR GGGGSSFGII LAWKLKLVHV PEKVSVFRVH RMLEGNTINI LQQWQHTSYL LPKEFFLRMI MQNDGEGKEK KVKVTFEGLF
301: LGTVDELIPI VSDKYPEFNL EHKDFFQEPV INCTERPCLK KECHEVPWIG SVLFLYNKEV DESLEVLLDN SVPIYKNYFK GTSDFVKTPI PDNGWKMIER
401: LFLEEDRPMM IVEPLGGRIN EFSESELPFP HRKGNMYNIQ HLVNWNDNSE NVSIKKIGWM RKFYKEMEPF VANSPRTAYT NYRDLDFGTN QNDYSYSKAK
501: IWGEKYFKSN FKRLAKVKSM VDPENFFRYQ QSIPPFTTEG MTNLIEEAWP STYIPSELQV F
Best Arabidopsis Sequence Match ( AT2G34790.1 )
(BLAST)
001: MAFAISKRNA TLFLVTLLLI SVPLSSSTLQ QDFVKCLVDN SDVSFPITAS FFSPDQNATL FKEELESTAQ NLRYLTPSNP KPVFIFEPLY ETHVQAAVVC
101: AKKLQLHLRL RSGGHDYEGL SFVAEDETPF VIVDLSKLRQ VDVDLDSNSA WAHAGATIGE VYYRIQEKSQ THGFPAGLCS SLGIGGHLVG GAYGSMMRKF
201: GLGADNVLDA RIVDANGQIL DRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPATVTV FTVTKTLEQD GTKVLYKWEQ IADKLDDDLF IRVIISPASK
301: TTKPGNRTIS MSYQAQFLGD SNRLLQVMQK SFPELGLTKK DCTEMSWIKS VMYIAGFPNS AAPEALLAGK SLFKNHFKAK SDFVKEPIPV EGLEGLWERF
401: LEEDSPLTIW NPYGGMMSRI SESEIPFPHR NGTLFKIQWL STWQDGKVSE ERHMKWIREM YSYMEQYVSK NPRQAYVNYR DLDLGTNEGE TDAREWGAKY
501: YKGNFERLVK IKGEFDPDNF FRHEQSVPTK IG
Arabidopsis Description
MEE23Berberine bridge enzyme-like 15 [Source:UniProtKB/Swiss-Prot;Acc:O64743]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.