Factsheet for Solyc02g079440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057528	Potato	extracellular	94.61	94.61
Solyc02g079460.1.1	Tomato	extracellular, golgi, vacuole	74.91	75.75
Solyc02g079450.1.1	Tomato	extracellular	73.05	73.18
Solyc02g079470.1.1	Tomato	endoplasmic reticulum, vacuole	72.49	72.36
Solyc02g079480.1.1	Tomato	plasma membrane, vacuole	64.13	61.5
Solyc02g070060.1.1	Tomato	vacuole	48.88	50.0
CDX79010	Canola	cytosol	24.72	49.81
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	47.77	49.23
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	47.4	48.85
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	47.4	48.85
CDX79034	Canola	plastid	47.21	48.75
Bra013501.1-P	Field mustard	vacuole	47.77	48.31
CDX82800	Canola	extracellular	46.84	48.28
AT4G20860.1	Thale cress	vacuole	47.21	47.92
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	39.41	47.32
Solyc10g054480.1.1	Tomato	plastid	26.58	47.04
Bra033740.1-P	Field mustard	golgi	47.58	46.8
Solyc06g065060.1.1	Tomato	extracellular	46.28	46.28
Solyc06g065070.1.1	Tomato	vacuole	46.1	46.27
Solyc02g070200.1.1	Tomato	vacuole	46.28	46.03
Solyc02g070180.1.1	Tomato	plasma membrane, vacuole	46.1	45.93
TraesCS1D01G443200.1	Wheat	cytosol	26.95	45.89
Solyc02g070110.1.1	Tomato	extracellular, vacuole	45.17	45.85
Solyc02g070070.1.1	Tomato	extracellular	44.8	45.39
AT5G44360.2	Thale cress	golgi	46.1	45.26
TraesCS7B01G026000.1	Wheat	cytosol	27.88	45.18
CDY68914	Canola	golgi, plastid	36.25	45.03
Solyc02g070130.1.1	Tomato	vacuole	44.24	44.65
Solyc02g070170.1.1	Tomato	extracellular, vacuole	44.24	44.49
Solyc09g072660.2.1	Tomato	extracellular	45.35	44.44
TraesCS7A01G354100.1	Wheat	vacuole	35.5	43.91
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.84	43.84
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	33.64	43.61
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	41.64	43.24
Solyc02g022850.1.1	Tomato	vacuole	43.31	43.07
Solyc02g069690.1.1	Tomato	golgi, vacuole	43.68	42.96
TraesCS2A01G051500.1	Wheat	peroxisome	27.14	42.82
TraesCS1D01G338700.1	Wheat	plasma membrane	42.19	42.35
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	41.64	42.34
HORVU7Hr1G089270.1	Barley	vacuole	41.82	42.29
KXG20146	Sorghum	extracellular	41.82	42.21
TraesCS2B01G172300.1	Wheat	vacuole	41.45	42.16
TraesCS2D01G151500.1	Wheat	vacuole	41.45	42.16
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.52	41.92
Os06t0549633-00	Rice	vacuole	41.08	41.86
TraesCS5D01G268800.1	Wheat	vacuole	40.71	41.71
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.64	41.71
Zm00001d046322_P001	Maize	extracellular	41.08	41.62
EER89910	Sorghum	vacuole	40.89	41.59
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.08	41.54
TraesCS3B01G070000.1	Wheat	mitochondrion	21.75	41.49
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	41.45	41.45
Solyc02g070090.1.1	Tomato	extracellular	41.08	41.39
TraesCS1B01G456900.1	Wheat	vacuole	38.1	41.16
TraesCS5A01G261400.1	Wheat	vacuole	40.15	41.14
TraesCS1B01G469800.1	Wheat	vacuole	41.08	41.08
TraesCS2B01G017300.1	Wheat	plastid	31.23	41.08
Zm00001d037005_P001	Maize	vacuole	39.78	40.84
HORVU2Hr1G008270.1	Barley	peroxisome	23.61	40.84
TraesCS1D01G433600.1	Wheat	vacuole	40.89	40.74
TraesCS7B01G273800.1	Wheat	plasma membrane	39.41	40.69
Zm00001d046319_P001	Maize	vacuole	39.78	40.68
Zm00001d046318_P001	Maize	vacuole	40.15	40.68
TraesCS7A01G354000.1	Wheat	vacuole	39.03	40.62
TraesCS7D01G368700.1	Wheat	unclear	39.03	40.62
TraesCS1A01G424100.1	Wheat	vacuole	38.48	40.59
TraesCS7A01G126600.1	Wheat	vacuole	39.22	40.58
Os06t0548100-00	Rice	golgi	40.33	40.56
Os06t0549900-01	Rice	extracellular	39.78	40.53
TraesCS2B01G066800.1	Wheat	vacuole	39.78	40.53
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.59	40.42
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.41	40.3
TraesCS7B01G273600.1	Wheat	vacuole	38.66	40.23
EER89907	Sorghum	plasma membrane, vacuole	39.22	40.11
HORVU1Hr1G092680.1	Barley	golgi, vacuole	39.96	40.11
KXG20147	Sorghum	vacuole	39.96	40.11
HORVU7Hr1G089160.3	Barley	vacuole	39.03	40.0
TraesCS7A01G353800.1	Wheat	vacuole	38.66	40.0
TraesCS7B01G273500.1	Wheat	plastid	40.33	39.96
Os06t0548800-01	Rice	extracellular	39.41	39.92
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.22	39.81
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	38.48	39.81
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.03	39.77
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.66	39.75
TraesCS2A01G052600.1	Wheat	vacuole	39.22	39.66
TraesCS2D01G052300.1	Wheat	plastid	38.85	39.66
HORVU7Hr1G089190.1	Barley	vacuole	38.66	39.62
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.66	39.62
TraesCS7B01G273900.1	Wheat	vacuole	38.29	39.62
HORVU2Hr1G000540.1	Barley	golgi, vacuole	39.96	39.59
TraesCS2D01G052700.1	Wheat	unclear	38.85	39.58
Os06t0549600-01	Rice	extracellular	38.66	39.54
TraesCS3A01G111600.1	Wheat	vacuole	38.85	39.36
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	38.1	39.27
TraesCS2A01G052900.1	Wheat	unclear	38.48	39.2
TraesCS2D01G006000.1	Wheat	plastid	36.8	39.13
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.08	39.12
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	37.92	39.08
TraesCS7D01G472000.1	Wheat	vacuole	37.92	39.08
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.48	39.06
TraesCS5B01G302700.1	Wheat	vacuole	37.73	39.04
TraesCS2B01G066400.1	Wheat	plastid	38.29	39.02
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.1	38.9
Os06t0549300-00	Rice	extracellular	37.73	38.81
TraesCS2B01G016900.1	Wheat	vacuole	37.36	38.8
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	37.92	38.64
KXG20949	Sorghum	vacuole	38.85	38.63
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	37.55	38.62
EER89908	Sorghum	plasma membrane, vacuole	38.66	38.59
Os06t0548200-01	Rice	extracellular	38.29	38.58
KXG26140	Sorghum	plasma membrane	38.29	38.5
KXG28418	Sorghum	vacuole	37.73	38.45
TraesCS7A01G400100.1	Wheat	unclear	37.36	38.29
TraesCS7B01G273700.1	Wheat	vacuole	36.99	38.27
Zm00001d049169_P001	Maize	vacuole	37.55	38.26
TraesCS7D01G393900.1	Wheat	vacuole	37.17	38.24
HORVU2Hr1G008300.1	Barley	plastid	37.36	38.21
TraesCS5D01G309100.1	Wheat	vacuole	36.99	38.2
Zm00001d037008_P001	Maize	golgi, vacuole	36.25	38.16
TraesCS7A01G353900.1	Wheat	vacuole	36.8	38.15
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	36.43	38.13
EES13185	Sorghum	vacuole	38.66	38.1
HORVU2Hr1G008310.1	Barley	golgi, vacuole	38.29	37.94
HORVU7Hr1G093940.1	Barley	vacuole	37.17	37.74
TraesCS7D01G368800.1	Wheat	vacuole	36.43	37.69
TraesCS4D01G223000.1	Wheat	plasma membrane	39.59	37.63
HORVU2Hr1G122590.1	Barley	vacuole	37.17	37.38
TraesCSU01G034600.1	Wheat	vacuole	35.69	37.28
TraesCS4B01G222500.1	Wheat	plasma membrane	39.22	37.28
TraesCS2B01G572400.1	Wheat	unclear	36.62	37.17
TraesCS4B01G391900.1	Wheat	vacuole	35.32	37.11
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	35.5	37.02
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	39.41	37.0
TraesCS2A01G005700.1	Wheat	vacuole	34.01	36.97
Solyc04g080400.1.1	Tomato	extracellular	38.66	36.88
TraesCS4A01G081300.1	Wheat	unclear	38.66	36.81
TraesCS2A01G542600.1	Wheat	vacuole	36.25	36.72
Os02t0235900-01	Rice	plasma membrane, vacuole	38.66	36.68
Os11t0495950-00	Rice	plasma membrane, vacuole	36.8	36.67
HORVU2Hr1G013930.1	Barley	golgi, vacuole	37.17	36.63
TraesCS2B01G145300.1	Wheat	plasma membrane	38.85	36.54
Zm00001d016199_P001	Maize	mitochondrion	37.92	36.36
TraesCS4B01G358600.1	Wheat	golgi	35.32	36.33
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	38.85	36.1
HORVU4Hr1G017270.1	Barley	vacuole	36.25	35.91
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	38.29	35.83
TraesCS2D01G052400.1	Wheat	vacuole	26.77	35.82
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	34.39	35.78
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	38.48	35.63
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.0	35.62
TraesCS4D01G101000.1	Wheat	golgi	35.69	35.36
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.1	35.28
TraesCS4A01G212100.1	Wheat	vacuole	35.5	35.24
HORVU7Hr1G089210.1	Barley	mitochondrion	40.15	35.18
TraesCS2D01G126400.1	Wheat	golgi, vacuole	37.73	35.06
TraesCS2B01G145500.1	Wheat	vacuole	37.92	35.05
TraesCS2D01G543700.1	Wheat	unclear	36.43	34.94
TraesCS4B01G104000.1	Wheat	vacuole	35.32	34.93
KXG29886	Sorghum	mitochondrion	37.17	34.42
Zm00001d037009_P001	Maize	plasma membrane	37.36	34.3
HORVU7Hr1G026630.1	Barley	plastid	30.48	32.35
KXG29885	Sorghum	plastid	29.93	32.14
HORVU7Hr1G089260.1	Barley	mitochondrion	28.07	31.07

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:K4B9G7	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc02g079440.1	EnsemblPlants:Solyc02g079440.1.1	UniParc:UPI000276887F	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:44002586..44004202

Molecular Weight (calculated)

61422.9 Da

IEP (calculated)

9.144

GRAVY (calculated)

-0.393

Length

538 amino acids

Sequence
(BLAST)

001: MGNLQILSLL IFSFFLSKCY SKQEDFVQCL SKYSKTNVTH NIYTPKSPTY SSILEYAQKN PRWMNSSHPI FIVSPTKESQ IKPVIRCAKK LGLQMKIKSG
101: GHDYEGISFR SKTPFVMLDL SNLNKIKIDL NEGTVWVQAG ATLGQLYYAI AKKSNVHGFA GGVCFSIGTG GIISGGGLGT LMRKFGLAAD NVVDARVIDV
201: NGKILNKNKM NEDLFWAIRG GGGASFGVIL AWKLKLVPVP EKVTVFNVYK RLEGNHNLLT KWESTAHQLP DKLLIRVIIQ NDGTENDKYV EVIFQSLYLG
301: PVDELIPLLK EKFPEFDLDK KDCFQEPVVD CSNRPCIKKE CRESSWIGSV LYFYGRRTNE SLEVLLEKSI PTQKNYFKAT SDFVKTPVPE SGWEMVEKMF
401: LEEERPQMIM EPLGGILDEI SESEIPFPHR KGNLYNIQYL VNWGDNSESI SSQKIRWMRK LYKKMEPYVA KSPRSAYLNY RDLDFGTNSE DYSYSKAKKW
501: GEKYYSGNFE RLAKVKSEVD PKNFFRYEQS IPPYHTDS

Best Arabidopsis Sequence Match ( AT2G34790.1 )
(BLAST)

001: MAFAISKRNA TLFLVTLLLI SVPLSSSTLQ QDFVKCLVDN SDVSFPITAS FFSPDQNATL FKEELESTAQ NLRYLTPSNP KPVFIFEPLY ETHVQAAVVC
101: AKKLQLHLRL RSGGHDYEGL SFVAEDETPF VIVDLSKLRQ VDVDLDSNSA WAHAGATIGE VYYRIQEKSQ THGFPAGLCS SLGIGGHLVG GAYGSMMRKF
201: GLGADNVLDA RIVDANGQIL DRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPATVTV FTVTKTLEQD GTKVLYKWEQ IADKLDDDLF IRVIISPASK
301: TTKPGNRTIS MSYQAQFLGD SNRLLQVMQK SFPELGLTKK DCTEMSWIKS VMYIAGFPNS AAPEALLAGK SLFKNHFKAK SDFVKEPIPV EGLEGLWERF
401: LEEDSPLTIW NPYGGMMSRI SESEIPFPHR NGTLFKIQWL STWQDGKVSE ERHMKWIREM YSYMEQYVSK NPRQAYVNYR DLDLGTNEGE TDAREWGAKY
501: YKGNFERLVK IKGEFDPDNF FRHEQSVPTK IG

Arabidopsis Description

MEE23Berberine bridge enzyme-like 15 [Source:UniProtKB/Swiss-Prot;Acc:O64743]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.