Factsheet for PGSC0003DMT400057528

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
vacuole 4
cytosol 1
extracellular 5
endoplasmic reticulum 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079440.1.1	Tomato	nucleus	94.61	94.61
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	86.62	84.12
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	75.09	75.23
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	67.47	64.48
PGSC0003DMT400012979	Potato	cytosol	46.28	62.56
PGSC0003DMT400086243	Potato	vacuole	49.26	50.38
CDX79010	Canola	cytosol	24.54	49.44
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	47.21	48.66
CDX79034	Canola	plastid	47.03	48.56
PGSC0003DMT400080465	Potato	cytosol	36.62	48.52
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	47.03	48.47
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	46.84	48.28
CDX82800	Canola	extracellular	46.65	48.08
PGSC0003DMT400054571	Potato	cytosol	36.25	48.03
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	39.96	47.99
Bra013501.1-P	Field mustard	vacuole	47.21	47.74
AT4G20860.1	Thale cress	vacuole	46.84	47.55
PGSC0003DMT400054385	Potato	plastid	43.49	47.27
Bra033740.1-P	Field mustard	golgi	47.96	47.17
PGSC0003DMT400080468	Potato	vacuole	45.91	46.78
PGSC0003DMT400054564	Potato	cytosol, plastid	42.94	46.76
TraesCS1D01G443200.1	Wheat	cytosol	27.14	46.2
AT5G44360.2	Thale cress	golgi	46.84	45.99
PGSC0003DMT400080467	Potato	vacuole	45.72	45.72
PGSC0003DMT400054386	Potato	vacuole	45.17	45.68
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.59	45.66
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	36.43	45.48
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	44.8	45.47
CDY68914	Canola	golgi, plastid	36.43	45.27
TraesCS7B01G026000.1	Wheat	cytosol	27.88	45.18
PGSC0003DMT400046308	Potato	extracellular	45.35	44.85
TraesCS7A01G354100.1	Wheat	vacuole	36.06	44.6
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	44.24	44.57
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	34.2	44.34
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.74	44.08
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	45.35	44.04
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.94	43.67
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.01	43.63
KXG20146	Sorghum	extracellular	42.94	43.34
HORVU7Hr1G089270.1	Barley	vacuole	42.75	43.23
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	41.08	43.08
TraesCS2B01G172300.1	Wheat	vacuole	42.19	42.91
Zm00001d046322_P001	Maize	extracellular	42.19	42.75
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	42.19	42.67
TraesCS1D01G338700.1	Wheat	plasma membrane	42.38	42.54
TraesCS2D01G151500.1	Wheat	vacuole	41.82	42.53
TraesCS2A01G051500.1	Wheat	peroxisome	26.95	42.52
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.38	42.38
EER89910	Sorghum	vacuole	41.45	42.16
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.71	42.12
TraesCS5D01G268800.1	Wheat	vacuole	41.08	42.1
TraesCS2B01G017300.1	Wheat	plastid	31.97	42.05
PGSC0003DMT400089776	Potato	golgi, vacuole	42.75	42.05
PGSC0003DMT400009569	Potato	cytosol	37.17	42.02
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.82	41.9
TraesCS3B01G070000.1	Wheat	mitochondrion	21.93	41.84
Zm00001d037005_P001	Maize	vacuole	40.71	41.79
Os06t0548100-00	Rice	golgi	41.45	41.68
Os06t0549633-00	Rice	vacuole	40.89	41.67
TraesCS5A01G261400.1	Wheat	vacuole	40.52	41.52
Os06t0549900-01	Rice	extracellular	40.71	41.48
TraesCS1A01G424100.1	Wheat	vacuole	39.22	41.37
TraesCS1B01G456900.1	Wheat	vacuole	38.29	41.37
TraesCS1B01G469800.1	Wheat	vacuole	41.26	41.26
PGSC0003DMT400043091	Potato	extracellular	40.52	41.21
Zm00001d046318_P001	Maize	vacuole	40.52	41.05
TraesCS7D01G368700.1	Wheat	unclear	39.41	41.01
TraesCS7A01G126600.1	Wheat	vacuole	39.59	40.96
TraesCS1D01G433600.1	Wheat	vacuole	41.08	40.93
TraesCS7B01G273800.1	Wheat	plasma membrane	39.59	40.88
EER89909	Sorghum	extracellular, plasma membrane, vacuole	39.96	40.87
Zm00001d046319_P001	Maize	vacuole	39.96	40.87
TraesCS7A01G354000.1	Wheat	vacuole	39.22	40.81
KXG20147	Sorghum	vacuole	40.52	40.67
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.78	40.61
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	18.03	40.59
TraesCS7A01G353800.1	Wheat	vacuole	39.22	40.58
TraesCS2B01G066800.1	Wheat	vacuole	39.78	40.53
HORVU2Hr1G008270.1	Barley	peroxisome	23.42	40.51
EER89907	Sorghum	plasma membrane, vacuole	39.59	40.49
TraesCS7B01G273600.1	Wheat	vacuole	38.85	40.43
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.03	40.38
TraesCS7B01G273500.1	Wheat	plastid	40.71	40.33
Os06t0549600-01	Rice	extracellular	39.41	40.3
HORVU1Hr1G092680.1	Barley	golgi, vacuole	40.15	40.3
TraesCS7B01G273900.1	Wheat	vacuole	38.85	40.19
Os06t0548800-01	Rice	extracellular	39.59	40.11
HORVU7Hr1G089190.1	Barley	vacuole	39.03	40.0
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.01	40.0
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.33	39.96
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.22	39.81
HORVU7Hr1G089160.3	Barley	vacuole	38.85	39.81
TraesCS2D01G052700.1	Wheat	unclear	39.03	39.77
TraesCS3A01G111600.1	Wheat	vacuole	39.22	39.74
TraesCS2A01G052600.1	Wheat	vacuole	39.22	39.66
TraesCS2D01G052300.1	Wheat	plastid	38.85	39.66
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.85	39.58
TraesCS2D01G006000.1	Wheat	plastid	37.17	39.53
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.66	39.47
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	38.29	39.46
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.85	39.43
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.48	39.43
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.66	39.39
TraesCS2B01G016900.1	Wheat	vacuole	37.92	39.38
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	38.1	39.27
TraesCS7D01G472000.1	Wheat	vacuole	38.1	39.27
Os06t0549300-00	Rice	extracellular	38.1	39.2
EER89908	Sorghum	plasma membrane, vacuole	39.22	39.15
Os06t0548200-01	Rice	extracellular	38.85	39.14
KXG26140	Sorghum	plasma membrane	38.85	39.07
TraesCS5B01G302700.1	Wheat	vacuole	37.73	39.04
TraesCS2B01G066400.1	Wheat	plastid	38.29	39.02
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	37.17	38.91
TraesCS7B01G273700.1	Wheat	vacuole	37.55	38.85
TraesCS2A01G052900.1	Wheat	unclear	38.1	38.83
KXG20949	Sorghum	vacuole	39.03	38.82
TraesCS7A01G353900.1	Wheat	vacuole	37.36	38.73
EES13185	Sorghum	vacuole	39.22	38.64
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	37.55	38.62
Zm00001d037008_P001	Maize	golgi, vacuole	36.62	38.55
HORVU2Hr1G008300.1	Barley	plastid	37.55	38.4
TraesCS5D01G309100.1	Wheat	vacuole	37.17	38.39
TraesCS7A01G400100.1	Wheat	unclear	37.36	38.29
TraesCS7D01G368800.1	Wheat	vacuole	36.99	38.27
KXG28418	Sorghum	vacuole	37.55	38.26
TraesCS7D01G393900.1	Wheat	vacuole	37.17	38.24
Zm00001d049169_P001	Maize	vacuole	37.36	38.07
TraesCS4D01G223000.1	Wheat	plasma membrane	39.78	37.81
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	36.25	37.79
HORVU2Hr1G122590.1	Barley	vacuole	37.55	37.76
HORVU2Hr1G008310.1	Barley	golgi, vacuole	38.1	37.75
HORVU7Hr1G093940.1	Barley	vacuole	37.17	37.74
TraesCSU01G034600.1	Wheat	vacuole	36.06	37.67
TraesCS2A01G005700.1	Wheat	vacuole	34.57	37.58
TraesCS2B01G572400.1	Wheat	unclear	36.99	37.55
TraesCS4B01G391900.1	Wheat	vacuole	35.69	37.5
TraesCS4B01G222500.1	Wheat	plasma membrane	39.41	37.46
TraesCS2B01G145300.1	Wheat	plasma membrane	39.59	37.24
Os11t0495950-00	Rice	plasma membrane, vacuole	37.36	37.22
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	39.59	37.17
TraesCS2A01G542600.1	Wheat	vacuole	36.62	37.1
Os02t0235900-01	Rice	plasma membrane, vacuole	39.03	37.04
TraesCS4A01G081300.1	Wheat	unclear	38.85	36.99
HORVU2Hr1G013930.1	Barley	golgi, vacuole	37.36	36.81
Zm00001d016199_P001	Maize	mitochondrion	38.29	36.72
TraesCS4B01G358600.1	Wheat	golgi	35.69	36.71
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	39.41	36.61
HORVU4Hr1G017270.1	Barley	vacuole	36.8	36.46
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	34.94	36.36
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	38.85	36.35
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.37	36.07
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	38.85	35.97
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.66	35.8
TraesCS2D01G126400.1	Wheat	golgi, vacuole	38.48	35.75
TraesCS4D01G101000.1	Wheat	golgi	36.06	35.73
TraesCS4A01G212100.1	Wheat	vacuole	35.87	35.61
TraesCS4B01G104000.1	Wheat	vacuole	35.87	35.48
TraesCS2D01G543700.1	Wheat	unclear	36.99	35.47
TraesCS2B01G145500.1	Wheat	vacuole	38.29	35.4
HORVU7Hr1G089210.1	Barley	mitochondrion	40.33	35.34
TraesCS2D01G052400.1	Wheat	vacuole	26.39	35.32
Zm00001d037009_P001	Maize	plasma membrane	38.29	35.15
KXG29886	Sorghum	mitochondrion	37.73	34.94
HORVU7Hr1G026630.1	Barley	plastid	30.86	32.74
KXG29885	Sorghum	plastid	30.3	32.53
HORVU7Hr1G089260.1	Barley	mitochondrion	27.88	30.86

Protein Annotations

EntrezGene:102604287	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1C187	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400022344	PGSC:PGSC0003DMG400022344	EnsemblPlants:PGSC0003DMT400057528	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000295579D	RefSeq:XP_006347165.1
SEG:seg	:	:	:	:	:

Description

FAD-linked oxidoreductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022344]

Coordinates

chr2:-:35138525..35140474

Molecular Weight (calculated)

61449.3 Da

IEP (calculated)

9.636

GRAVY (calculated)

-0.357

Length

538 amino acids

Sequence
(BLAST)

001: MGNLQILSLL IFSFFLSKCY SKQEDFVQCL SKYSKTNVTQ NIYSPKSPTY SSILEYAQKN PRWMNSSHPI FIVSPTKESQ IKPVIRCAKK LGLQIKIKSG
101: GHDYEGISFR SKSPFVMLDL SNLNKIKIDL NEGTVWVQAG ATLGQLYYAI AKKSNVHGFP GGVCFSIGTG GIISGGGIGT LMRKFGLAAD NVVDARVIDV
201: NGKILNKNKM KEDLFWAIRG GGGASFGVIL AWKLKLVRVP DKVTVFTVYK RLQGNQNLLK KWENIAHQLP DKLLIRVIIQ NDGTENEKYV EIIFQSLYLG
301: PVDELIPLLK EKFPEFDLEK KDCFQEPVVD CSNRPCIKKE CRESSWIGSV LYFYGRRTNE SLEVLLEKSI PTQKNYFKAT SDFVKTPIPE SGWEMVKRLF
401: LEEERPLMIM EPLGGILDKI SESEIPFPHR KGNLYNIQYL VNWGDNSESI SSQKIAWMRK LYKKMEPYVA KSPRSAYLNY RDLDFGTNSE DYSYSKAKIW
501: GEKYFRGNFE RLAKVKSEVD PKNFFRNEQS IPPYHTDS

Best Arabidopsis Sequence Match ( AT2G34790.1 )
(BLAST)

001: MAFAISKRNA TLFLVTLLLI SVPLSSSTLQ QDFVKCLVDN SDVSFPITAS FFSPDQNATL FKEELESTAQ NLRYLTPSNP KPVFIFEPLY ETHVQAAVVC
101: AKKLQLHLRL RSGGHDYEGL SFVAEDETPF VIVDLSKLRQ VDVDLDSNSA WAHAGATIGE VYYRIQEKSQ THGFPAGLCS SLGIGGHLVG GAYGSMMRKF
201: GLGADNVLDA RIVDANGQIL DRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPATVTV FTVTKTLEQD GTKVLYKWEQ IADKLDDDLF IRVIISPASK
301: TTKPGNRTIS MSYQAQFLGD SNRLLQVMQK SFPELGLTKK DCTEMSWIKS VMYIAGFPNS AAPEALLAGK SLFKNHFKAK SDFVKEPIPV EGLEGLWERF
401: LEEDSPLTIW NPYGGMMSRI SESEIPFPHR NGTLFKIQWL STWQDGKVSE ERHMKWIREM YSYMEQYVSK NPRQAYVNYR DLDLGTNEGE TDAREWGAKY
501: YKGNFERLVK IKGEFDPDNF FRHEQSVPTK IG

Arabidopsis Description

MEE23Berberine bridge enzyme-like 15 [Source:UniProtKB/Swiss-Prot;Acc:O64743]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.