Factsheet for PGSC0003DMT400054386

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 9
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g070130.1.1	Tomato	vacuole	92.29	92.12
PGSC0003DMT400054385	Potato	plastid	79.32	85.25
PGSC0003DMT400054564	Potato	cytosol, plastid	78.95	85.02
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	83.65	83.96
PGSC0003DMT400054571	Potato	cytosol	63.72	83.5
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.58	82.92
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	72.93	75.63
PGSC0003DMT400080465	Potato	cytosol	43.8	57.39
PGSC0003DMT400080468	Potato	vacuole	54.89	55.3
PGSC0003DMT400080467	Potato	vacuole	55.26	54.65
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	43.8	54.06
KRH58388	Soybean	vacuole	55.26	53.75
KRH58389	Soybean	nucleus	53.76	53.36
KRH42266	Soybean	vacuole	53.95	53.25
KRH58344	Soybean	vacuole	53.01	53.21
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	42.48	50.45
KRH58387	Soybean	plastid, vacuole	51.88	50.27
PGSC0003DMT400043091	Potato	extracellular	49.44	49.72
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	49.44	49.25
PGSC0003DMT400086243	Potato	vacuole	47.74	48.29
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	50.0	48.01
TraesCS1D01G443200.1	Wheat	cytosol	28.01	47.15
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.65	46.99
PGSC0003DMT400046308	Potato	extracellular	47.93	46.88
TraesCS7A01G354100.1	Wheat	vacuole	37.78	46.21
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	45.86	45.44
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.61	45.21
PGSC0003DMT400009569	Potato	cytosol	40.41	45.17
PGSC0003DMT400057528	Potato	extracellular	45.68	45.17
TraesCS2B01G172300.1	Wheat	vacuole	44.74	44.99
PGSC0003DMT400089776	Potato	golgi, vacuole	46.05	44.79
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.74	44.32
TraesCS2D01G151500.1	Wheat	vacuole	43.98	44.23
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	43.98	44.23
TraesCS1D01G338700.1	Wheat	plasma membrane	44.55	44.22
Zm00001d046322_P001	Maize	extracellular	43.98	44.07
TraesCS1B01G469800.1	Wheat	vacuole	44.55	44.05
TraesCS1D01G433600.1	Wheat	vacuole	44.55	43.89
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	45.68	43.86
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.48	43.63
TraesCS1B01G456900.1	Wheat	vacuole	40.79	43.57
KXG20146	Sorghum	extracellular	43.61	43.53
HORVU1Hr1G092680.1	Barley	golgi, vacuole	43.8	43.47
HORVU7Hr1G089270.1	Barley	vacuole	43.42	43.42
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	43.42	43.42
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	43.8	43.31
TraesCS1A01G424100.1	Wheat	vacuole	41.35	43.14
TraesCS5D01G268800.1	Wheat	vacuole	42.48	43.05
TraesCS5A01G261400.1	Wheat	vacuole	42.29	42.86
Os06t0548100-00	Rice	golgi	43.05	42.8
Zm00001d046318_P001	Maize	vacuole	42.67	42.75
EER89910	Sorghum	vacuole	42.48	42.72
TraesCS7A01G126600.1	Wheat	vacuole	41.54	42.5
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.54	42.5
Zm00001d046319_P001	Maize	vacuole	41.92	42.4
TraesCS7A01G354000.1	Wheat	vacuole	41.17	42.36
TraesCS2B01G017300.1	Wheat	plastid	32.52	42.3
Os06t0549633-00	Rice	vacuole	41.92	42.23
PGSC0003DMT400012979	Potato	cytosol	31.58	42.21
TraesCS7D01G368700.1	Wheat	unclear	40.98	42.17
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	44.36	41.92
EER89909	Sorghum	extracellular, plasma membrane, vacuole	41.35	41.83
Zm00001d037005_P001	Maize	vacuole	41.17	41.79
TraesCS7B01G273600.1	Wheat	vacuole	40.6	41.78
HORVU7Hr1G089160.3	Barley	vacuole	41.17	41.71
TraesCS7B01G273700.1	Wheat	vacuole	40.6	41.54
Os06t0549900-01	Rice	extracellular	41.17	41.48
EER89907	Sorghum	plasma membrane, vacuole	40.98	41.44
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	40.04	41.44
TraesCS7B01G026000.1	Wheat	cytosol	25.75	41.27
Os06t0548800-01	Rice	extracellular	41.17	41.24
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	43.8	41.24
TraesCS7A01G353900.1	Wheat	vacuole	40.23	41.23
TraesCS2D01G052300.1	Wheat	plastid	40.79	41.18
TraesCS7B01G273900.1	Wheat	vacuole	40.23	41.15
TraesCS7D01G368800.1	Wheat	vacuole	40.23	41.15
TraesCS7B01G273500.1	Wheat	plastid	41.92	41.07
Os06t0549600-01	Rice	extracellular	40.6	41.06
TraesCS2A01G051500.1	Wheat	peroxisome	26.32	41.06
KXG20147	Sorghum	vacuole	41.35	41.04
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	40.04	40.8
HORVU2Hr1G008300.1	Barley	plastid	40.23	40.68
KXG20949	Sorghum	vacuole	41.35	40.67
Os06t0548200-01	Rice	extracellular	40.79	40.64
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.85	40.61
Os06t0549300-00	Rice	extracellular	39.85	40.54
TraesCS2B01G066400.1	Wheat	plastid	40.23	40.53
TraesCS5D01G309100.1	Wheat	vacuole	39.66	40.5
TraesCS7B01G273800.1	Wheat	plasma membrane	39.66	40.5
EER89908	Sorghum	plasma membrane, vacuole	40.98	40.45
TraesCS7D01G472000.1	Wheat	vacuole	39.66	40.42
TraesCS7A01G353800.1	Wheat	vacuole	39.47	40.38
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.29	40.19
TraesCS4B01G358600.1	Wheat	golgi	39.47	40.15
TraesCS7D01G393900.1	Wheat	vacuole	39.47	40.15
TraesCS2D01G006000.1	Wheat	plastid	38.16	40.12
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.85	40.0
HORVU7Hr1G089190.1	Barley	vacuole	39.47	40.0
TraesCS2A01G052900.1	Wheat	unclear	39.66	39.96
HORVU2Hr1G008270.1	Barley	peroxisome	23.31	39.87
TraesCS7A01G400100.1	Wheat	unclear	39.29	39.81
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	39.1	39.77
TraesCS2B01G016900.1	Wheat	vacuole	38.72	39.77
EES13185	Sorghum	vacuole	40.79	39.74
Zm00001d037008_P001	Maize	golgi, vacuole	38.16	39.73
KXG26140	Sorghum	plasma membrane	39.85	39.63
HORVU4Hr1G017270.1	Barley	vacuole	40.41	39.59
TraesCS2A01G052600.1	Wheat	vacuole	39.47	39.47
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.35	39.46
HORVU2Hr1G122590.1	Barley	vacuole	39.66	39.44
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.23	39.41
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	38.16	39.34
TraesCS2B01G145300.1	Wheat	plasma membrane	42.29	39.34
TraesCS2B01G066900.1	Wheat	nucleus, unclear	38.91	39.28
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.72	39.24
TraesCS5B01G302700.1	Wheat	vacuole	38.35	39.23
TraesCS2D01G052700.1	Wheat	unclear	38.91	39.2
HORVU7Hr1G093940.1	Barley	vacuole	38.91	39.06
TraesCS2B01G572400.1	Wheat	unclear	38.91	39.06
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.72	39.02
TraesCS2A01G542600.1	Wheat	vacuole	38.91	38.98
TraesCS4B01G391900.1	Wheat	vacuole	37.41	38.87
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.85	38.83
TraesCS2B01G066800.1	Wheat	vacuole	38.53	38.83
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	38.35	38.71
HORVU2Hr1G008310.1	Barley	golgi, vacuole	39.47	38.67
TraesCSU01G034600.1	Wheat	vacuole	37.41	38.64
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.35	38.64
TraesCS4B01G222500.1	Wheat	plasma membrane	40.98	38.52
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.29	38.49
Os02t0235900-01	Rice	plasma membrane, vacuole	40.98	38.45
TraesCS4A01G081300.1	Wheat	unclear	40.79	38.41
TraesCS2A01G005700.1	Wheat	vacuole	35.71	38.38
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.16	38.3
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	41.35	38.26
TraesCS3A01G111600.1	Wheat	vacuole	38.16	38.23
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	41.17	38.22
TraesCS4D01G223000.1	Wheat	plasma membrane	40.6	38.16
KXG28418	Sorghum	vacuole	37.78	38.07
TraesCS4A01G212100.1	Wheat	vacuole	38.72	38.01
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	41.35	38.0
TraesCS3B01G070000.1	Wheat	mitochondrion	20.11	37.94
Zm00001d049169_P001	Maize	vacuole	37.59	37.88
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	41.17	37.69
TraesCS4B01G104000.1	Wheat	vacuole	38.53	37.68
TraesCS2D01G543700.1	Wheat	unclear	39.66	37.61
Zm00001d016199_P001	Maize	mitochondrion	39.66	37.61
TraesCS4D01G101000.1	Wheat	golgi	38.35	37.57
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	30.26	36.76
KXG29886	Sorghum	mitochondrion	40.04	36.66
TraesCS2D01G052400.1	Wheat	vacuole	27.63	36.57
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	39.85	36.49
TraesCS2B01G145500.1	Wheat	vacuole	39.66	36.25
Os11t0495950-00	Rice	plasma membrane, vacuole	36.65	36.11
TraesCS2D01G126400.1	Wheat	golgi, vacuole	39.29	36.1
Zm00001d037009_P001	Maize	plasma membrane	39.29	35.67
KXG29885	Sorghum	plastid	32.89	34.93
HORVU7Hr1G089210.1	Barley	mitochondrion	40.23	34.85
HORVU7Hr1G026630.1	Barley	plastid	30.64	32.15
HORVU7Hr1G089260.1	Barley	mitochondrion	28.95	31.69

Protein Annotations

EntrezGene:102594583	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1BW86	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400021108	PGSC:PGSC0003DMG400021108	EnsemblPlants:PGSC0003DMT400054386	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF30	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI0002950E24	RefSeq:XP_006353078.1
SEG:seg	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021108]

Coordinates

chr2:-:29336420..29338253

Molecular Weight (calculated)

60576.7 Da

IEP (calculated)

9.414

GRAVY (calculated)

-0.239

Length

532 amino acids

Sequence
(BLAST)

001: MTSFNKLTIL LFLLICFSSS WANKTHDDFL ECLTHKIMNS NSISQVIHTP KNSSYSTILN SFTDNLRITS DFKPSIIFTP TNESQIQAAI HCSKIHDLQI
101: RIRSGGHDYE GLSHTSETPF FIIDLRNLRS ISIDTQKKTA WIQAGATLGE VYYRIAQKSK NLAVVAGVCP TVGVGGHFSG GGYGMMSRKF GTAADNIIDA
201: KLIDANGLIK DRESMGEDHF WAIRGGGGTS FGLIISWKVK LVDIPEKVTV FNVTRRLEQN VTQLVYKWQH IADKVDDNLL LRIFLRSNIE SPFRHGQMTV
301: NAFFTTMFVG GVDKLLREMQ KSFPELGLVK EDCIEMSWIE SILFLAGFPR GTSLDVLLDW NSTTNQEYYF KGKSDYVQHP ISINGLEGIW KLYNQLGENS
401: GVELQFSPYG GKLSEISESK TPFPHRAGNI FMIEYAVFWV KMENSKRNIA WNRKLYRYMA KYVSKSPRAA YFNYRDLDLG MNNIIGNTSY EQTRIWGVKY
501: FKNNFDRLVK VKTKIDPTNF FRNEQSIPPL LS

Best Arabidopsis Sequence Match ( AT5G44440.1 )
(BLAST)

001: MEFSSFLFTI LLFSLNISPL VSAHGSNHED FLKCLSYRMN DNTVEPKVIH TSKDSSFFSI LDSSIQNPRF SVSETPKPVS IITPVKASDV QTVIRCAQLH
101: GIHVRTRSAG HCYEGLSYIA YNKPFAVIDL RNLRSISLDV DNRTGWVQTG ATAGELYYEI GKTTKSLAFP AGIHPTVGVG GQFSGGGYGT LLRKYGLAAD
201: NIIDALVVDA SGRILDRQAM GEDYFWAIRG GGGSSFGVIL SWKVKLVDVP STITVFKVQK TSKKEAVRII KKWQYAADKV PDDLFIRTTL ERSNKNAVHA
301: LFTGLYIGPV NNLLALMEEK FPELGLEKEG CEEMSWIESV LWFADFPKGE SLGVLTNRER TSLSFKGKDD FVQEPIPEAA IQEIWRRLEA PEARLGKIIL
401: TPFGGKMSEM AEYETPFPHR GGNLYEIQYV AYWREEEDKN KTETDKYLKW VDSVYEFMTP YVSKSPRGAY VNFKDMDLGM YLGKKKTKYE EGKSWGVKYF
501: KNNFERLVRV KTRVDPTDFF CDEQSIPLVN KVT

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44440]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.