Factsheet for PGSC0003DMT400012979

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057528	Potato	extracellular	62.56	46.28
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	63.07	45.31
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	59.05	43.76
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	61.06	43.16
CDX79010	Canola	cytosol	28.89	43.07
TraesCS1D01G443200.1	Wheat	cytosol	33.92	42.72
TraesCS7B01G026000.1	Wheat	cytosol	35.43	42.47
PGSC0003DMT400054571	Potato	cytosol	42.46	41.63
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	22.61	41.1
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.68	40.22
PGSC0003DMT400080465	Potato	cytosol	40.7	39.9
TraesCS2A01G051500.1	Wheat	peroxisome	34.17	39.88
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	42.46	39.21
HORVU2Hr1G008270.1	Barley	peroxisome	29.9	38.26
TraesCS3B01G070000.1	Wheat	mitochondrion	26.63	37.59
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	21.36	35.56
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	46.48	35.44
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	46.48	35.44
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	46.23	35.25
PGSC0003DMT400086243	Potato	vacuole	46.48	35.17
CDX79034	Canola	plastid	45.48	34.74
CDX82800	Canola	extracellular	45.23	34.48
PGSC0003DMT400080468	Potato	vacuole	45.73	34.47
PGSC0003DMT400009569	Potato	cytosol	41.21	34.45
Bra013501.1-P	Field mustard	vacuole	45.98	34.4
AT4G20860.1	Thale cress	vacuole	45.48	34.15
PGSC0003DMT400054564	Potato	cytosol, plastid	41.96	33.81
PGSC0003DMT400054385	Potato	plastid	41.96	33.74
KXG20146	Sorghum	extracellular	44.47	33.21
PGSC0003DMT400080467	Potato	vacuole	44.72	33.09
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	42.46	32.94
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	43.97	32.77
Zm00001d046322_P001	Maize	extracellular	43.72	32.77
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	43.47	32.7
AT5G44360.2	Thale cress	golgi	44.97	32.66
Bra033740.1-P	Field mustard	golgi	44.72	32.54
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	45.23	32.49
PGSC0003DMT400046308	Potato	extracellular	44.22	32.35
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	42.96	32.26
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	36.18	32.14
PGSC0003DMT400089776	Potato	golgi, vacuole	43.72	31.81
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.96	31.78
TraesCS2B01G172300.1	Wheat	vacuole	42.21	31.76
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	41.21	31.66
PGSC0003DMT400054386	Potato	vacuole	42.21	31.58
TraesCS2D01G151500.1	Wheat	vacuole	41.96	31.57
Os06t0548100-00	Rice	golgi	42.21	31.4
KXG20147	Sorghum	vacuole	42.21	31.34
TraesCS1D01G338700.1	Wheat	plasma membrane	42.21	31.34
TraesCS1B01G469800.1	Wheat	vacuole	41.96	31.04
Zm00001d046319_P001	Maize	vacuole	40.95	30.99
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.45	30.96
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.71	30.91
PGSC0003DMT400043091	Potato	extracellular	40.95	30.81
TraesCS7A01G354100.1	Wheat	vacuole	33.67	30.8
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.46	30.78
TraesCS1D01G433600.1	Wheat	vacuole	41.71	30.74
TraesCS2B01G017300.1	Wheat	plastid	31.41	30.56
HORVU7Hr1G089270.1	Barley	vacuole	40.7	30.45
Os06t0549600-01	Rice	extracellular	39.95	30.23
TraesCS7D01G368700.1	Wheat	unclear	39.2	30.17
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.95	30.17
Os06t0548200-01	Rice	extracellular	40.45	30.15
TraesCS1B01G456900.1	Wheat	vacuole	37.69	30.12
TraesCS5A01G261400.1	Wheat	vacuole	39.7	30.1
TraesCS5D01G268800.1	Wheat	vacuole	39.7	30.1
EER89910	Sorghum	vacuole	39.95	30.06
TraesCS7A01G126600.1	Wheat	vacuole	39.2	30.0
Zm00001d046318_P001	Maize	vacuole	39.95	29.94
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	39.95	29.89
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.45	29.79
TraesCS7A01G354000.1	Wheat	vacuole	38.69	29.79
TraesCS7B01G273600.1	Wheat	vacuole	38.69	29.79
Zm00001d037005_P001	Maize	vacuole	39.2	29.77
TraesCS7B01G273800.1	Wheat	plasma membrane	38.94	29.75
Os06t0549900-01	Rice	extracellular	39.45	29.73
EER89908	Sorghum	plasma membrane, vacuole	40.2	29.68
TraesCS7B01G273500.1	Wheat	plastid	40.45	29.65
TraesCS7B01G273700.1	Wheat	vacuole	38.69	29.62
TraesCS7B01G273900.1	Wheat	vacuole	38.44	29.42
TraesCS7D01G368800.1	Wheat	vacuole	38.44	29.42
TraesCS1A01G424100.1	Wheat	vacuole	37.69	29.41
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	30.65	29.4
KXG20949	Sorghum	vacuole	39.95	29.39
Os06t0548800-01	Rice	extracellular	39.2	29.38
TraesCS2B01G066800.1	Wheat	vacuole	38.94	29.36
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.94	29.36
KXG26140	Sorghum	plasma membrane	39.45	29.35
HORVU7Hr1G089160.3	Barley	vacuole	38.69	29.33
TraesCS7A01G353900.1	Wheat	vacuole	38.19	29.29
EER89909	Sorghum	extracellular, plasma membrane, vacuole	38.69	29.28
Os06t0549300-00	Rice	extracellular	38.44	29.25
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	38.44	29.25
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.94	29.25
TraesCS7A01G353800.1	Wheat	vacuole	38.19	29.23
TraesCS3A01G111600.1	Wheat	vacuole	38.94	29.19
TraesCS2A01G052800.1	Wheat	plastid, vacuole	38.44	29.14
EES13185	Sorghum	vacuole	39.95	29.12
TraesCS2D01G006000.1	Wheat	plastid	36.93	29.05
TraesCS2D01G052300.1	Wheat	plastid	38.44	29.03
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.44	28.98
EER89907	Sorghum	plasma membrane, vacuole	38.19	28.9
HORVU2Hr1G008300.1	Barley	plastid	38.19	28.9
TraesCS5B01G302700.1	Wheat	vacuole	37.69	28.85
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	37.69	28.85
TraesCS4B01G222500.1	Wheat	plasma membrane	40.95	28.8
TraesCS4D01G223000.1	Wheat	plasma membrane	40.95	28.8
Os06t0549633-00	Rice	vacuole	38.19	28.79
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	38.19	28.68
TraesCS5D01G309100.1	Wheat	vacuole	37.44	28.6
TraesCS2B01G066400.1	Wheat	plastid	37.94	28.6
TraesCS2D01G052700.1	Wheat	unclear	37.94	28.6
TraesCS2A01G052600.1	Wheat	vacuole	38.19	28.57
HORVU2Hr1G000540.1	Barley	golgi, vacuole	38.94	28.55
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	37.44	28.54
TraesCS7D01G472000.1	Wheat	vacuole	37.44	28.54
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	40.45	28.5
HORVU2Hr1G122590.1	Barley	vacuole	38.19	28.41
Zm00001d049169_P001	Maize	vacuole	37.69	28.41
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	41.46	28.4
Os02t0235900-01	Rice	plasma membrane, vacuole	40.45	28.4
HORVU7Hr1G089190.1	Barley	vacuole	37.44	28.38
TraesCS4A01G081300.1	Wheat	unclear	40.2	28.32
KXG28418	Sorghum	vacuole	37.44	28.22
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	36.93	28.16
TraesCS2A01G052900.1	Wheat	unclear	37.19	28.03
HORVU2Hr1G008310.1	Barley	golgi, vacuole	38.19	27.99
Zm00001d037008_P001	Maize	golgi, vacuole	35.93	27.98
CDY68914	Canola	golgi, plastid	30.4	27.94
TraesCS4B01G391900.1	Wheat	vacuole	35.93	27.93
TraesCS2B01G572400.1	Wheat	unclear	37.19	27.92
TraesCS2A01G542600.1	Wheat	vacuole	37.19	27.87
HORVU7Hr1G026630.1	Barley	plastid	35.43	27.81
Zm00001d016199_P001	Maize	mitochondrion	39.2	27.81
TraesCS2B01G016900.1	Wheat	vacuole	36.18	27.8
TraesCSU01G034600.1	Wheat	vacuole	35.93	27.77
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	35.93	27.66
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.2	27.63
TraesCS7A01G400100.1	Wheat	unclear	36.43	27.62
Os11t0495950-00	Rice	plasma membrane, vacuole	37.44	27.59
TraesCS4B01G358600.1	Wheat	golgi	36.18	27.53
TraesCS7D01G393900.1	Wheat	vacuole	36.18	27.53
TraesCS2B01G145300.1	Wheat	plasma membrane	39.45	27.45
TraesCS4B01G104000.1	Wheat	vacuole	37.19	27.21
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	35.18	27.13
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	39.2	27.13
HORVU4Hr1G017270.1	Barley	vacuole	36.93	27.07
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	38.94	27.05
HORVU7Hr1G093940.1	Barley	vacuole	35.93	26.98
TraesCS4D01G101000.1	Wheat	golgi	36.43	26.7
TraesCS4A01G212100.1	Wheat	vacuole	36.18	26.57
TraesCS2D01G543700.1	Wheat	unclear	37.44	26.56
HORVU2Hr1G013930.1	Barley	golgi, vacuole	36.43	26.56
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	38.69	26.51
KXG29885	Sorghum	plastid	33.17	26.35
TraesCS2A01G005700.1	Wheat	vacuole	32.66	26.26
TraesCS2D01G126400.1	Wheat	golgi, vacuole	38.19	26.25
KXG29886	Sorghum	mitochondrion	38.19	26.16
TraesCS2B01G145500.1	Wheat	vacuole	37.94	25.95
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	32.66	25.29
HORVU7Hr1G089210.1	Barley	mitochondrion	38.19	24.76
Zm00001d037009_P001	Maize	plasma membrane	35.68	24.23
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	25.88	23.52
TraesCS2D01G052400.1	Wheat	vacuole	22.36	22.14
HORVU7Hr1G089260.1	Barley	mitochondrion	23.12	18.93

Protein Annotations

EntrezGene:107059843	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
InterPro:IPR016166	UniProt:M1A244	InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400005057
PGSC:PGSC0003DMG400005057	EnsemblPlants:PGSC0003DMT400012979	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176
UniParc:UPI000294FEB2	RefSeq:XP_015162368.1	SEG:seg	:	:	:

Description

FAD-binding domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005057]

Coordinates

chr3:-:2238034..2239230

Molecular Weight (calculated)

45869.8 Da

IEP (calculated)

10.095

GRAVY (calculated)

-0.313

Length

398 amino acids

Sequence
(BLAST)

001: MGQLYYEIAK KGENLAFPGG LYPSVGSGGI ISGGGIGTLM RKFGLAADNV LDARVMNVNG EILDRESMGK DLFWAIRGGG GSSFCVILAW KVKLVRVPSK
101: LTVFTVRRKL HGQTINLLQK WQNVSHKLSR NLFMRVLIQN MGIGSKKIVQ VSFQGLFLGR VSELLPMLNQ TFPEFELVTK DCFQDPVVNC AIGLPCIKKE
201: CFEVPWIHTT LYFASKRTND SIEFMVNKTM PKRKNYYKAT SDFVKSPLPK EVWGMIRTMF SDEERPMMIF DPLGGRMDEI SKFEIPFPYR KGNLFNIQYM
301: VNWYDNSENI SNKKIKWLRE LYEKMKPFVS HFPRNGYLNY RDLDFGKNDG EYRYSNSRVW GEKYFDGNFE RLAKVKSKVD PSNFFRFQQS IPPFSVST

Best Arabidopsis Sequence Match ( AT4G20860.1 )
(BLAST)

001: MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS
101: RKLGVQVRTM SGGHDYEGLS YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG VGGHISGGGF GTIMRKYGLA
201: SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301: RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP
401: LMIFEPLGGK ISKISETESP YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG STKGINTSFE DARKWGETYF
501: KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF

Arabidopsis Description

FAD-OXRBerberine bridge enzyme-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.