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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • peroxisome 1
  • cytosol 2
  • extracellular 2
  • golgi 3
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033740.1-P Field mustard golgi 86.13 86.29
CDY68914 Canola golgi, plastid 67.52 85.45
AT4G20860.1 Thale cress vacuole 64.96 67.17
KRH56394 Soybean vacuole 53.1 55.22
VIT_10s0003g05390.t01 Wine grape extracellular 53.65 54.95
KRH56395 Soybean nucleus 51.82 53.69
KRH62528 Soybean endoplasmic reticulum, golgi, vacuole 51.09 53.03
GSMUA_Achr3P23450_001 Banana plasma membrane, vacuole 41.24 50.45
TraesCS1D01G443200.1 Wheat cytosol 27.37 47.47
Solyc02g079460.1.1 Tomato extracellular, golgi, vacuole 45.8 47.18
PGSC0003DMT400057528 Potato extracellular 45.99 46.84
PGSC0003DMT400057680 Potato extracellular, plasma membrane, vacuole 45.62 46.55
Solyc02g079450.1.1 Tomato extracellular 45.62 46.55
GSMUA_Achr3P23470_001 Banana extracellular, plasma membrane, vacuole 35.22 46.51
TraesCS7A01G353600.1 Wheat cytosol, nucleus, peroxisome 18.43 46.12
Solyc02g079440.1.1 Tomato nucleus 45.26 46.1
AT2G34790.1 Thale cress golgi, vacuole 44.71 46.05
AT4G20820.1 Thale cress plastid 44.71 46.05
Solyc02g079470.1.1 Tomato endoplasmic reticulum, vacuole 45.07 45.83
TraesCS7B01G026000.1 Wheat cytosol 27.74 45.78
TraesCS7D01G369200.1 Wheat extracellular, vacuole 44.16 45.75
PGSC0003DMT400036039 Potato extracellular, plasma membrane, vacuole 45.99 45.49
AT1G30760.2 Thale cress golgi 45.62 45.29
TraesCS7A01G354100.1 Wheat vacuole 35.95 45.29
TraesCS2B01G172300.1 Wheat vacuole 43.61 45.18
HORVU7Hr1G089280.1 Barley mitochondrion, peroxisome, plasma membrane 44.34 45.17
KXG20147 Sorghum vacuole 44.16 45.15
AT5G44400.1 Thale cress golgi, vacuole 44.16 45.07
PGSC0003DMT400012979 Potato cytosol 32.66 44.97
TraesCS2A01G051500.1 Wheat peroxisome 27.92 44.87
TraesCS7B01G273700.1 Wheat vacuole 42.52 44.81
TraesCS2D01G151500.1 Wheat vacuole 43.25 44.8
KXG20146 Sorghum extracellular 43.43 44.65
TraesCS7D01G368800.1 Wheat vacuole 42.34 44.62
TraesCS7D01G368500.1 Wheat plasma membrane, vacuole 42.15 44.59
TraesCS1D01G338700.1 Wheat plasma membrane 43.43 44.4
HORVU7Hr1G089270.1 Barley vacuole 43.07 44.36
Os06t0548100-00 Rice golgi 43.25 44.3
AT5G44390.1 Thale cress vacuole 43.8 44.28
TraesCS1A01G433900.1 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 43.25 44.13
Zm00001d046322_P001 Maize extracellular 42.7 44.07
TraesCS1B01G469800.1 Wheat vacuole 43.25 44.05
TraesCS1A01G424100.1 Wheat vacuole 40.88 43.92
TraesCS7B01G273600.1 Wheat vacuole 41.42 43.91
TraesCS1B01G456900.1 Wheat vacuole 39.78 43.78
AT5G44410.1 Thale cress golgi 42.7 43.74
TraesCS7D01G368700.1 Wheat unclear 41.24 43.71
TraesCS1D01G433600.1 Wheat vacuole 43.07 43.7
EER89910 Sorghum vacuole 42.15 43.67
TraesCS7D01G124500.1 Wheat plasma membrane, vacuole 41.42 43.65
TraesCS7A01G353700.1 Wheat extracellular, vacuole 42.34 43.61
TraesCS7A01G354000.1 Wheat vacuole 41.06 43.52
HORVU2Hr1G008270.1 Barley peroxisome 24.64 43.41
TraesCS2A01G052700.1 Wheat extracellular, plasma membrane, plastid, vacuole 41.42 43.4
HORVU2Hr1G122590.1 Barley vacuole 42.34 43.36
TraesCS7A01G353900.1 Wheat vacuole 41.06 43.35
Zm00001d046318_P001 Maize vacuole 41.97 43.31
TraesCS3B01G070000.1 Wheat mitochondrion 22.26 43.26
HORVU7Hr1G089160.3 Barley vacuole 41.42 43.24
TraesCS5D01G268800.1 Wheat vacuole 41.42 43.24
TraesCS4B01G391900.1 Wheat vacuole 40.33 43.16
EER89909 Sorghum extracellular, plasma membrane, vacuole 41.42 43.16
HORVU1Hr1G092680.1 Barley golgi, vacuole 42.15 43.1
TraesCS7A01G126600.1 Wheat vacuole 40.88 43.08
TraesCS7B01G273500.1 Wheat plastid 42.52 42.91
TraesCS2B01G572400.1 Wheat unclear 41.42 42.83
Os06t0549900-01 Rice extracellular 41.24 42.8
Os06t0549600-01 Rice extracellular 41.06 42.78
TraesCS2A01G542600.1 Wheat vacuole 41.42 42.75
Zm00001d037005_P001 Maize vacuole 40.88 42.75
TraesCSU01G034600.1 Wheat vacuole 40.15 42.72
TraesCS5A01G261400.1 Wheat vacuole 40.88 42.67
HORVU2Hr1G008330.1 Barley extracellular, plasma membrane, vacuole 41.24 42.64
Os06t0549300-00 Rice extracellular 40.69 42.64
AT1G30730.1 Thale cress extracellular 40.88 42.59
Zm00001d046319_P001 Maize vacuole 40.88 42.59
AT1G30700.1 Thale cress vacuole 40.88 42.5
TraesCS2D01G052300.1 Wheat plastid 40.88 42.5
AT1G34575.1 Thale cress vacuole 40.69 42.31
TraesCS2B01G017300.1 Wheat plastid 31.57 42.3
TraesCS4B01G358600.1 Wheat golgi 40.33 42.26
TraesCS5A01G555000.1 Wheat plasma membrane, vacuole 39.78 42.25
Os06t0549633-00 Rice vacuole 40.69 42.23
AT1G26420.1 Thale cress vacuole 40.69 42.16
AT1G30720.1 Thale cress vacuole 40.51 42.13
AT1G30710.1 Thale cress extracellular, plasma membrane, vacuole 40.69 42.0
TraesCS2B01G066900.1 Wheat nucleus, unclear 40.33 41.94
Solyc02g079480.1.1 Tomato plasma membrane, vacuole 42.88 41.89
TraesCS2A01G052900.1 Wheat unclear 40.33 41.86
HORVU4Hr1G086520.1 Barley plasma membrane, vacuole 39.42 41.78
TraesCS2B01G066400.1 Wheat plastid 40.15 41.67
TraesCS2D01G052500.1 Wheat endoplasmic reticulum, extracellular, vacuole 40.15 41.67
GSMUA_Achr3P23440_001 Banana extracellular, plasma membrane 39.05 41.63
EER89908 Sorghum plasma membrane, vacuole 40.88 41.56
TraesCS2A01G052800.1 Wheat plastid, vacuole 39.78 41.52
TraesCS7D01G393900.1 Wheat vacuole 39.6 41.49
EER89907 Sorghum plasma membrane, vacuole 39.78 41.44
HORVU4Hr1G017270.1 Barley vacuole 41.06 41.44
TraesCS7D01G368900.1 Wheat cytosol, peroxisome, plasma membrane 18.07 41.42
TraesCS2A01G052600.1 Wheat vacuole 40.15 41.35
TraesCS7A01G400100.1 Wheat unclear 39.6 41.33
TraesCS2B01G066800.1 Wheat vacuole 39.78 41.29
TraesCS5D01G309100.1 Wheat vacuole 39.23 41.27
TraesCS7D01G369100.1 Wheat plasma membrane, vacuole 42.52 41.24
Os06t0548200-01 Rice extracellular 40.15 41.2
AT4G20800.1 Thale cress endoplasmic reticulum, extracellular, vacuole 39.6 41.1
TraesCS2D01G052700.1 Wheat unclear 39.6 41.1
KXG20949 Sorghum vacuole 40.51 41.04
PGSC0003DMT400057523 Potato extracellular, golgi, vacuole 42.15 41.03
AT4G20840.1 Thale cress plasma membrane 40.33 41.0
AT1G26400.1 Thale cress golgi, vacuole 39.42 40.99
AT1G26390.1 Thale cress vacuole 39.6 40.94
EES13185 Sorghum vacuole 40.69 40.84
TraesCS4B01G222500.1 Wheat plasma membrane 42.15 40.81
TraesCS4B01G104000.1 Wheat vacuole 40.51 40.81
AT5G44380.2 Thale cress mitochondrion, plastid 43.25 40.79
TraesCS7D01G369000.1 Wheat extracellular, vacuole 38.69 40.77
AT1G26380.1 Thale cress endoplasmic reticulum 39.78 40.75
TraesCS2D01G006000.1 Wheat plastid 37.59 40.71
HORVU2Hr1G008300.1 Barley plastid 39.05 40.68
TraesCS4D01G223000.1 Wheat plasma membrane 41.97 40.64
TraesCS5B01G302700.1 Wheat vacuole 38.32 40.38
TraesCS7A01G353800.1 Wheat vacuole 38.32 40.38
HORVU7Hr1G093940.1 Barley vacuole 39.05 40.38
KXG26140 Sorghum plasma membrane 39.42 40.37
HORVU2Hr1G000540.1 Barley golgi, vacuole 39.96 40.33
TraesCS4D01G101000.1 Wheat golgi 39.96 40.33
Os06t0548800-01 Rice extracellular 39.05 40.3
HORVU7Hr1G089190.1 Barley vacuole 38.5 40.19
AT2G34810.1 Thale cress vacuole 39.6 40.19
Zm00001d037008_P001 Maize golgi, vacuole 37.41 40.12
AT1G01980.1 Thale cress plasma membrane, vacuole 39.6 40.11
TraesCS3D01G113700.1 Wheat extracellular, plasma membrane, vacuole 38.5 40.04
AT1G26410.1 Thale cress golgi 40.33 40.04
TraesCS4A01G081300.1 Wheat unclear 41.24 40.0
TraesCS7B01G273900.1 Wheat vacuole 37.96 40.0
HORVU2Hr1G008310.1 Barley golgi, vacuole 39.6 39.96
TraesCS3A01G111600.1 Wheat vacuole 38.69 39.92
TraesCS7B01G273800.1 Wheat plasma membrane 37.96 39.92
Os02t0235900-01 Rice plasma membrane, vacuole 41.24 39.86
TraesCS4A01G212100.1 Wheat vacuole 39.42 39.85
HORVU3Hr1G020240.1 Barley extracellular, plasma membrane, vacuole 38.5 39.81
TraesCS3B01G132200.1 Wheat extracellular, plasma membrane, vacuole 38.32 39.77
TraesCS2D01G543700.1 Wheat unclear 40.69 39.75
TraesCS7A01G484600.1 Wheat extracellular, plasma membrane, vacuole 37.77 39.66
TraesCS7B01G388200.1 Wheat extracellular, plasma membrane, vacuole 37.77 39.66
TraesCS7D01G472000.1 Wheat vacuole 37.77 39.66
Zm00001d016199_P001 Maize mitochondrion 40.51 39.57
AT1G30740.2 Thale cress vacuole 38.69 39.55
KXG29886 Sorghum mitochondrion 41.79 39.41
TraesCS2D01G052400.1 Wheat vacuole 28.83 39.3
HORVU4Hr1G062830.1 Barley mitochondrion, peroxisome, plasma membrane 41.61 39.24
AT5G44440.2 Thale cress golgi 43.07 39.14
KXG28418 Sorghum vacuole 37.59 39.02
AT1G11770.1 Thale cress vacuole 38.14 38.99
TraesCS2B01G145300.1 Wheat plasma membrane 40.69 38.99
Zm00001d049169_P001 Maize vacuole 37.23 38.64
TraesCS2B01G016900.1 Wheat vacuole 36.5 38.61
TraesCS2A01G123200.1 Wheat plasma membrane, vacuole 40.33 38.57
TraesCS2D01G126200.1 Wheat plasma membrane, vacuole 40.33 38.43
Os11t0495950-00 Rice plasma membrane, vacuole 37.77 38.33
HORVU2Hr1G021650.2 Barley golgi, mitochondrion, plastid, vacuole 40.33 38.17
TraesCS2A01G005700.1 Wheat vacuole 34.31 37.98
HORVU2Hr1G013930.1 Barley golgi, vacuole 37.77 37.91
Zm00001d037009_P001 Maize plasma membrane 40.33 37.71
KXG29885 Sorghum plastid 33.58 36.73
AT4G20830.1 Thale cress vacuole 38.14 36.67
HORVU2Hr1G000530.1 Barley plasma membrane, vacuole 29.01 36.3
TraesCS2D01G126400.1 Wheat golgi, vacuole 37.96 35.92
TraesCS2A01G123400.1 Wheat plasma membrane, vacuole 37.77 35.63
TraesCS2B01G145500.1 Wheat vacuole 37.77 35.57
HORVU7Hr1G089210.1 Barley mitochondrion 39.23 35.02
HORVU7Hr1G026630.1 Barley plastid 29.56 31.95
HORVU7Hr1G089260.1 Barley mitochondrion 27.92 31.48
Protein Annotations
Gene3D:3.30.43.10Gene3D:3.30.465.50Gene3D:3.40.462.20MapMan:50.1.1EntrezGene:834462UniProt:A0A1P8BBH9
ProteinID:AED95101.1ProteinID:ANM68940.1ArrayExpress:AT5G44360EnsemblPlantsGene:AT5G44360RefSeq:AT5G44360TAIR:AT5G44360
RefSeq:AT5G44360-TAIR-GEnsemblPlants:AT5G44360.2Unigene:At.28010ProteinID:BAB10121.1InterPro:BBEInterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sfInterPro:FAD-bd_2_sub1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0008150GO:GO:0008152
GO:GO:0009505GO:GO:0016491GO:GO:0016614GO:GO:0030312GO:GO:0050660GO:GO:0055114
GO:GO:0071949InterPro:IPR016166InterPro:IPR016167RefSeq:NP_001330654.1RefSeq:NP_199249.1InterPro:Oxid_FAD_bind_N
InterPro:Oxy_OxRdtase_FAD_BSPFAM:PF01565PFAM:PF08031ScanProsite:PS00862PFscan:PS51387PANTHER:PTHR32448
PANTHER:PTHR32448:SF36SUPFAM:SSF56176UniParc:UPI000848D430SEG:seg::
Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44360]
Coordinates
chr5:-:17871924..17873829
Molecular Weight (calculated)
62466.7 Da
IEP (calculated)
9.950
GRAVY (calculated)
-0.199
Length
548 amino acids
Sequence
(BLAST)
001: MLYLCNFKHK KSKTLKMRTL EAFALSLFLV FLVKWVNSDS SSSPSKDQFL SCMSTHSDSS FINPKSFIHK PDSRVYTDFS QSLISQNYRF LTLNFTSQKP
101: ILIVTPRTDT EIQRSLLCSR KLGVKVRTKS GGHDYEGLSY LSLHSPFIIL DLVNVRSIEI NLADETAWVG AGATIGELYY KIAKSSKIHG FPAGTCPSVG
201: VGGHFSGGGF GAMMRKHGLA ADNVVDARFV DANGRIYNSR REMGEDLFWA IRGGGAASFG VVLSWKVKLV RVPEKVTCFR RNLPLTQNMT KIVHRWQQIA
301: AELDDNLFIR VIVSISGGSV QTTFQANYLG GIDKLIPLMN QKFPELGLTF QDCSEMTWID SIMYFNWKKG QPLETLLDRG QRYNDLYFKA KSDFVKNPIP
401: EIGLEGIWTR FHEVESPIMI MEPLGGKMYE IGETETPFPH RRGNLYNIQY MVKWRLKDIG VMEKHVTWMR LLYRYMRVYV SASPRGAYLN YRDLDLGMNR
501: GVNTSFEDAK LWGFRYFGSN FKRLAIVKGK IDPTNFFRNE QSVPPLIV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.