CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
cytosol 2
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	85.44	85.61
KRH56394	Soybean	vacuole	80.34	80.65
VIT_10s0003g05390.t01	Wine grape	extracellular	59.17	58.5
CDX79010	Canola	cytosol	27.22	53.93
Bra013478.1-P	Field mustard	endoplasmic reticulum, vacuole	52.93	53.64
CDX82800	Canola	extracellular	52.93	53.64
CDX82785	Canola	endoplasmic reticulum, extracellular, vacuole	52.74	53.45
CDX79034	Canola	plastid	52.55	53.36
AT4G20860.1	Thale cress	vacuole	53.31	53.21
Bra013501.1-P	Field mustard	vacuole	53.5	53.2
CDY69774	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	51.98	52.68
Solyc02g070060.1.1	Tomato	vacuole	52.36	52.66
Bra033740.1-P	Field mustard	golgi	54.44	52.65
KRH42266	Soybean	vacuole	53.31	52.32
CDY68914	Canola	golgi, plastid	42.53	51.96
AT5G44360.2	Thale cress	golgi	53.69	51.82
KRH42268	Soybean	vacuole	51.42	51.42
KRH58391	Soybean	vacuole	51.42	51.32
PGSC0003DMT400086243	Potato	vacuole	50.85	51.14
Solyc10g054480.1.1	Tomato	plastid	29.11	50.66
KRH58389	Soybean	nucleus	51.23	50.56
KRH58388	Soybean	vacuole	52.17	50.46
KRH36852	Soybean	plastid	42.16	50.34
KRH36839	Soybean	nucleus	51.61	50.28
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	20.79	50.23
KRH58344	Soybean	vacuole	49.91	49.81
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	42.16	49.78
KRH42267	Soybean	vacuole	49.53	49.72
KRH42273	Soybean	nucleus	49.53	49.72
KRH11824	Soybean	nucleus	50.85	49.54
KRH58398	Soybean	plasma membrane, vacuole	49.34	49.15
KRH58387	Soybean	plastid, vacuole	50.28	48.45
TraesCS1D01G443200.1	Wheat	cytosol	28.92	48.42
KRH42808	Soybean	extracellular, vacuole	48.2	47.66
KRH58399	Soybean	nucleus	48.02	47.57
KRH42274	Soybean	mitochondrion, nucleus	46.69	47.23
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.86	46.99
KRH11844	Soybean	vacuole	48.02	46.95
TraesCS3B01G070000.1	Wheat	mitochondrion	24.95	46.81
TraesCS7B01G026000.1	Wheat	cytosol	29.3	46.69
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	45.56	46.53
TraesCS7A01G354100.1	Wheat	vacuole	38.19	46.44
KRH41927	Soybean	nucleus	46.31	46.23
KRH36853	Soybean	vacuole	46.88	46.18
KRH11825	Soybean	vacuole	45.56	46.17
KRH11845	Soybean	vacuole	46.69	46.17
KRH42269	Soybean	vacuole	45.94	45.76
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	45.56	45.56
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	45.94	45.17
KRH36766	Soybean	vacuole	44.8	44.47
KXG20146	Sorghum	extracellular	44.61	44.28
Zm00001d046322_P001	Maize	extracellular	44.42	44.26
TraesCS2B01G172300.1	Wheat	vacuole	44.23	44.23
HORVU7Hr1G089270.1	Barley	vacuole	44.42	44.17
TraesCS2D01G151500.1	Wheat	vacuole	44.05	44.05
TraesCS7A01G126600.1	Wheat	vacuole	43.29	44.04
TraesCS1D01G338700.1	Wheat	plasma membrane	44.61	44.03
HORVU7Hr1G089190.1	Barley	vacuole	43.67	44.0
TraesCS5D01G268800.1	Wheat	vacuole	43.67	44.0
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	44.23	43.98
Os06t0548100-00	Rice	golgi	44.42	43.93
TraesCS1B01G469800.1	Wheat	vacuole	44.61	43.87
EER89910	Sorghum	vacuole	43.86	43.86
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	43.1	43.85
TraesCS5A01G261400.1	Wheat	vacuole	43.48	43.81
TraesCS7B01G273800.1	Wheat	plasma membrane	43.1	43.76
Os06t0549900-01	Rice	extracellular	43.67	43.75
TraesCS2A01G051500.1	Wheat	peroxisome	28.17	43.7
KRH11841	Soybean	vacuole	46.12	43.65
TraesCS7B01G273500.1	Wheat	plastid	44.8	43.65
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.23	43.58
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	19.66	43.51
TraesCS1B01G456900.1	Wheat	vacuole	40.83	43.37
EER89907	Sorghum	plasma membrane, vacuole	43.1	43.35
KXG20147	Sorghum	vacuole	43.86	43.28
Zm00001d046319_P001	Maize	vacuole	42.91	43.16
TraesCS1A01G424100.1	Wheat	vacuole	41.59	43.14
Zm00001d046318_P001	Maize	vacuole	43.29	43.13
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	42.53	43.1
TraesCS7B01G273900.1	Wheat	vacuole	42.34	43.08
KRH42276	Soybean	nucleus	48.2	43.0
KRH36843	Soybean	vacuole	43.29	42.96
TraesCS1D01G433600.1	Wheat	vacuole	43.86	42.96
Zm00001d037005_P001	Maize	vacuole	42.53	42.94
KRH49946	Soybean	extracellular, vacuole	34.4	42.92
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	42.34	42.91
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	42.16	42.88
Os06t0549633-00	Rice	vacuole	42.72	42.8
KRH36842	Soybean	vacuole	43.1	42.78
HORVU2Hr1G008270.1	Barley	peroxisome	25.14	42.77
TraesCS7A01G354000.1	Wheat	vacuole	41.78	42.75
KRH36840	Soybean	nucleus	44.23	42.7
TraesCS7A01G353800.1	Wheat	vacuole	41.97	42.69
KRH36851	Soybean	vacuole	45.56	42.65
KRH11826	Soybean	nucleus	43.86	42.65
Os06t0548800-01	Rice	extracellular	42.72	42.56
TraesCS7B01G273600.1	Wheat	vacuole	41.59	42.55
KRH11827	Soybean	vacuole	43.1	42.46
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	41.21	42.41
EER89909	Sorghum	extracellular, plasma membrane, vacuole	42.16	42.4
KRH41928	Soybean	vacuole	42.53	42.37
TraesCS7D01G368700.1	Wheat	unclear	41.4	42.36
HORVU1Hr1G092680.1	Barley	golgi, vacuole	42.91	42.35
KRH42272	Soybean	vacuole	43.1	42.3
Os06t0549600-01	Rice	extracellular	41.97	42.21
TraesCS7D01G472000.1	Wheat	vacuole	41.59	42.15
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	44.99	42.12
HORVU7Hr1G089160.3	Barley	vacuole	41.78	42.1
TraesCS2A01G052600.1	Wheat	vacuole	42.16	41.92
TraesCS7A01G353900.1	Wheat	vacuole	41.02	41.81
Os06t0549300-00	Rice	extracellular	41.21	41.68
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.21	41.68
TraesCS2B01G066900.1	Wheat	nucleus, unclear	41.4	41.56
TraesCS7D01G368800.1	Wheat	vacuole	40.83	41.54
TraesCS4B01G358600.1	Wheat	golgi	41.02	41.49
KXG20949	Sorghum	vacuole	42.34	41.4
TraesCS7B01G273700.1	Wheat	vacuole	40.64	41.35
TraesCS2A01G052800.1	Wheat	plastid, vacuole	41.02	41.33
TraesCS2A01G052900.1	Wheat	unclear	41.21	41.29
KRH11830	Soybean	vacuole	38.37	41.26
KXG26140	Sorghum	plasma membrane	41.59	41.12
TraesCS2B01G066800.1	Wheat	vacuole	41.02	41.1
TraesCS4B01G391900.1	Wheat	vacuole	39.7	41.02
EER89908	Sorghum	plasma membrane, vacuole	41.78	41.0
TraesCS2D01G052300.1	Wheat	plastid	40.83	40.99
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.83	40.91
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	39.89	40.89
TraesCS2B01G017300.1	Wheat	plastid	31.57	40.83
Os06t0548200-01	Rice	extracellular	41.21	40.82
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	40.83	40.75
TraesCS2B01G572400.1	Wheat	unclear	40.83	40.75
HORVU2Hr1G122590.1	Barley	vacuole	41.21	40.75
TraesCS2D01G006000.1	Wheat	plastid	38.94	40.71
KRH71761	Soybean	mitochondrion, plastid, vacuole	32.7	40.71
EES13185	Sorghum	vacuole	41.97	40.66
TraesCS2B01G066400.1	Wheat	plastid	40.45	40.53
TraesCS2D01G052700.1	Wheat	unclear	40.45	40.53
KRH12123	Soybean	plastid	34.97	40.39
TraesCSU01G034600.1	Wheat	vacuole	39.32	40.39
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	39.32	40.23
KRH42271	Soybean	endoplasmic reticulum	43.67	40.03
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	40.08	40.0
Zm00001d049169_P001	Maize	vacuole	39.89	39.96
HORVU2Hr1G008300.1	Barley	plastid	39.7	39.92
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	39.7	39.85
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	43.29	39.83
KRG92465	Soybean	golgi, vacuole	41.4	39.82
HORVU2Hr1G000540.1	Barley	golgi, vacuole	40.83	39.78
KXG28418	Sorghum	vacuole	39.7	39.77
TraesCS2B01G145300.1	Wheat	plasma membrane	42.91	39.69
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.64	39.59
TraesCS2A01G542600.1	Wheat	vacuole	39.7	39.55
Zm00001d037008_P001	Maize	golgi, vacuole	38.19	39.53
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	42.72	39.44
KRH36841	Soybean	vacuole	29.3	39.44
TraesCS3A01G111600.1	Wheat	vacuole	39.51	39.36
KRH34335	Soybean	vacuole	40.83	39.27
TraesCS2B01G016900.1	Wheat	vacuole	38.37	39.19
TraesCS5D01G309100.1	Wheat	vacuole	38.56	39.16
KRH58395	Soybean	endoplasmic reticulum	42.91	39.0
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	42.53	38.86
TraesCS5B01G302700.1	Wheat	vacuole	38.19	38.85
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	38.75	38.83
TraesCS4B01G222500.1	Wheat	plasma membrane	41.21	38.52
HORVU7Hr1G089210.1	Barley	mitochondrion	44.61	38.44
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	31.76	38.36
TraesCS4D01G223000.1	Wheat	plasma membrane	41.02	38.34
Zm00001d016199_P001	Maize	mitochondrion	40.64	38.32
HORVU4Hr1G017270.1	Barley	vacuole	39.32	38.31
TraesCS4D01G101000.1	Wheat	golgi	39.32	38.31
TraesCS7A01G400100.1	Wheat	unclear	38.0	38.29
HORVU2Hr1G013930.1	Barley	golgi, vacuole	39.51	38.28
Os02t0235900-01	Rice	plasma membrane, vacuole	40.83	38.1
TraesCS2D01G052400.1	Wheat	vacuole	28.92	38.06
TraesCS4A01G212100.1	Wheat	vacuole	38.94	38.01
TraesCS4A01G081300.1	Wheat	unclear	40.45	37.88
KRG99206	Soybean	extracellular, peroxisome	28.92	37.87
TraesCS4B01G104000.1	Wheat	vacuole	38.94	37.87
TraesCS7D01G393900.1	Wheat	vacuole	37.43	37.86
TraesCS2A01G005700.1	Wheat	vacuole	35.35	37.78
Os11t0495950-00	Rice	plasma membrane, vacuole	38.37	37.59
HORVU7Hr1G093940.1	Barley	vacuole	37.43	37.36
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	41.02	37.35
TraesCS2B01G145500.1	Wheat	vacuole	41.02	37.29
TraesCS2D01G543700.1	Wheat	unclear	39.51	37.25
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.64	37.13
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	40.45	36.83
KXG29886	Sorghum	mitochondrion	40.08	36.49
Zm00001d037009_P001	Maize	plasma membrane	40.26	36.35
KXG29885	Sorghum	plastid	32.89	34.73
HORVU7Hr1G089260.1	Barley	mitochondrion	31.38	34.16
HORVU7Hr1G026630.1	Barley	plastid	30.62	31.95

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EMBL:ACUP02004115	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	EnsemblPlantsGene:GLYMA_06G321600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614
GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:I1KFV5	InterPro:IPR016166	InterPro:IPR016167
EnsemblPlants:KRH56395	ProteinID:KRH56395	ProteinID:KRH56395.1	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565
PFAM:PF08031	ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF36	SUPFAM:SSF56176
SignalP:SignalP-noTM	UniParc:UPI0000152DA5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51023402..51025354

Molecular Weight (calculated)

59904.1 Da

IEP (calculated)

7.964

GRAVY (calculated)

-0.204

Length

529 amino acids

Sequence
(BLAST)

001: MELSYCAVFL ILLIPISRAD ATSVEKQFKE CLLTQLDGNS EHIEKITFTS SSTLYPQVWD SLAQNPRWVN ISSRKPLMIL TPFHESEIQA AILCSKELKL
101: QLRVRSGGHD YEGLSYLSDV PFVMVDLINI RSIEINLADE TAWVQAGASI GELYYKISKA SKVHGFPAGT CPSVGIGGHI SGGGQGLMLR KHGLAADNVV
201: DAYLIDANGK IHDRKSMGED VFWAIRGGDA SSFGVILAWK IKLVRVPPIV TGFNVPRTPE EGVTDLIHRW QYIAHDLHED LVIRVIAQIS GHDKSKKFRA
301: TFNSIFLGGV DRLIPLMNES FPELGLQAKD CTEMSWIQSV MFIAGYNIED PLELLLNRTT MFKRSFKAKS DFFKEPVPKS GLEGAWKLLL EEEIAFLIME
401: PYGGRMNEIS ESEIPFPHRK GNLYNLQYLV NWEVNSDEAS RRHLQWAKMV YKYMTPYVSK SPRAAYFNYK DLDLGKNKLD STSYSEASVW GKKYFKGNFR
501: RLAQIKTKFD PLNFFRNEQS IPLLNSHHS

Best Arabidopsis Sequence Match ( AT4G20860.1 )
(BLAST)

001: MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS
101: RKLGVQVRTM SGGHDYEGLS YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG VGGHISGGGF GTIMRKYGLA
201: SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301: RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP
401: LMIFEPLGGK ISKISETESP YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG STKGINTSFE DARKWGETYF
501: KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF

Arabidopsis Description

FAD-OXRBerberine bridge enzyme-like 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.