CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11824	Soybean	nucleus	97.05	97.05
KRH58398	Soybean	plasma membrane, vacuole	81.22	83.05
KRH42273	Soybean	nucleus	80.29	82.73
KRH42274	Soybean	mitochondrion, nucleus	70.35	73.04
KRH58399	Soybean	nucleus	69.98	71.16
VIT_10s0003g05420.t01	Wine grape	vacuole	70.17	70.69
CDY70228	Canola	cytosol, golgi, peroxisome	39.78	70.13
CDY43653	Canola	golgi	38.31	68.2
Solyc09g072660.2.1	Tomato	extracellular	68.69	67.94
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	66.48	67.6
Bra023131.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	66.11	67.23
CDY02326	Canola	endoplasmic reticulum, plasma membrane, vacuole	66.11	67.23
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	68.51	67.15
CDX77568	Canola	endoplasmic reticulum, plasma membrane	65.93	67.04
CDY67309	Canola	endoplasmic reticulum, plasma membrane	65.75	66.85
Bra014890.1-P	Field mustard	plasma membrane	65.56	66.67
Solyc02g070070.1.1	Tomato	extracellular	64.83	66.29
CDY70679	Canola	cytosol, mitochondrion, peroxisome	28.36	66.09
AT2G34790.1	Thale cress	golgi, vacuole	64.27	65.6
AT1G30760.2	Thale cress	golgi	66.48	65.4
CDY31642	Canola	plasma membrane	60.59	64.64
Bra005392.1-P	Field mustard	plasma membrane	63.17	64.47
CDX84280	Canola	plasma membrane	60.22	64.24
KRH42276	Soybean	nucleus	69.61	63.74
Solyc02g069690.1.1	Tomato	golgi, vacuole	62.98	62.52
Bra021930.1-P	Field mustard	plasma membrane	57.64	62.35
PGSC0003DMT400089776	Potato	golgi, vacuole	62.43	61.97
KRG99206	Soybean	extracellular, peroxisome	39.96	53.71
KRH42266	Soybean	vacuole	52.67	53.06
KRH36852	Soybean	plastid	43.09	52.82
KRH58388	Soybean	vacuole	52.67	52.29
KRH56394	Soybean	vacuole	50.64	52.18
KRH62528	Soybean	endoplasmic reticulum, golgi, vacuole	50.46	51.89
KRH56395	Soybean	nucleus	50.28	51.61
KRH58387	Soybean	plastid, vacuole	51.75	51.18
KRH41927	Soybean	nucleus	49.72	50.94
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	41.99	50.89
KRH58344	Soybean	vacuole	49.54	50.75
KRH42268	Soybean	vacuole	49.36	50.66
KRH58389	Soybean	nucleus	49.91	50.56
KRH58391	Soybean	vacuole	48.99	50.19
KRH11844	Soybean	vacuole	49.54	49.72
KRH42808	Soybean	extracellular, vacuole	48.99	49.72
KRH11845	Soybean	vacuole	48.62	49.35
KRH42269	Soybean	vacuole	48.25	49.34
KRH36766	Soybean	vacuole	48.25	49.16
KRH42267	Soybean	vacuole	47.7	49.15
KRH36853	Soybean	vacuole	48.43	48.98
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	36.65	47.95
TraesCS7B01G026000.1	Wheat	cytosol	29.28	47.89
TraesCS1D01G443200.1	Wheat	cytosol	27.81	47.78
KRH11826	Soybean	nucleus	47.7	47.61
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	45.3	47.49
KRH11827	Soybean	vacuole	46.96	47.49
KRH41928	Soybean	vacuole	46.41	47.46
TraesCS7A01G354100.1	Wheat	vacuole	37.94	47.36
KRH36843	Soybean	vacuole	46.41	47.28
KRH36840	Soybean	nucleus	47.7	47.26
KRH49946	Soybean	extracellular, vacuole	36.83	47.17
HORVU7Hr1G089270.1	Barley	vacuole	45.86	46.8
KRH36842	Soybean	vacuole	45.86	46.72
KXG20146	Sorghum	extracellular	45.86	46.72
TraesCS2B01G172300.1	Wheat	vacuole	45.49	46.69
KRH42271	Soybean	endoplasmic reticulum	49.54	46.62
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	18.78	46.58
KRH11841	Soybean	vacuole	47.88	46.51
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	45.3	46.24
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	44.2	46.15
KXG20147	Sorghum	vacuole	45.49	46.08
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	44.75	45.94
HORVU1Hr1G092680.1	Barley	golgi, vacuole	45.3	45.9
KRH58395	Soybean	endoplasmic reticulum	49.17	45.88
Zm00001d046322_P001	Maize	extracellular	44.75	45.76
EER89910	Sorghum	vacuole	44.57	45.75
TraesCS2D01G151500.1	Wheat	vacuole	44.57	45.75
TraesCS1D01G338700.1	Wheat	plasma membrane	45.12	45.71
Os06t0548200-01	Rice	extracellular	44.94	45.69
KRH36851	Soybean	vacuole	47.51	45.66
TraesCS1B01G456900.1	Wheat	vacuole	41.8	45.58
KRH42272	Soybean	vacuole	45.12	45.45
Zm00001d046318_P001	Maize	vacuole	44.38	45.39
TraesCS7D01G368700.1	Wheat	unclear	43.09	45.26
TraesCS7A01G126600.1	Wheat	vacuole	43.28	45.19
TraesCS1D01G433600.1	Wheat	vacuole	44.94	45.19
TraesCS1B01G469800.1	Wheat	vacuole	44.75	45.17
TraesCS7B01G273500.1	Wheat	plastid	45.12	45.12
TraesCS7A01G354000.1	Wheat	vacuole	42.91	45.07
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.38	44.88
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	44.38	44.8
TraesCS7A01G353900.1	Wheat	vacuole	42.73	44.7
Os06t0548100-00	Rice	golgi	44.01	44.67
Zm00001d037005_P001	Maize	vacuole	43.09	44.66
TraesCS7B01G273700.1	Wheat	vacuole	42.73	44.62
TraesCS7D01G368800.1	Wheat	vacuole	42.73	44.62
TraesCS5D01G268800.1	Wheat	vacuole	43.09	44.57
TraesCS1A01G424100.1	Wheat	vacuole	41.8	44.51
TraesCS7B01G273600.1	Wheat	vacuole	42.36	44.49
KRH71761	Soybean	mitochondrion, plastid, vacuole	34.81	44.47
TraesCS5A01G261400.1	Wheat	vacuole	42.91	44.38
TraesCS4B01G391900.1	Wheat	vacuole	41.8	44.34
TraesCS3B01G070000.1	Wheat	mitochondrion	23.02	44.33
EER89909	Sorghum	extracellular, plasma membrane, vacuole	42.91	44.3
KRH36841	Soybean	vacuole	32.04	44.27
HORVU7Hr1G089160.3	Barley	vacuole	42.73	44.19
KXG20949	Sorghum	vacuole	44.01	44.18
Os06t0549900-01	Rice	extracellular	42.91	44.13
KRH11830	Soybean	vacuole	39.96	44.11
TraesCS2B01G017300.1	Wheat	plastid	33.15	44.01
Os06t0549600-01	Rice	extracellular	42.54	43.92
TraesCSU01G034600.1	Wheat	vacuole	41.62	43.88
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	41.62	43.8
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	45.49	43.72
Os06t0549300-00	Rice	extracellular	41.99	43.59
HORVU2Hr1G122590.1	Barley	vacuole	42.91	43.55
HORVU2Hr1G008270.1	Barley	peroxisome	24.86	43.41
Os06t0549633-00	Rice	vacuole	42.17	43.37
HORVU2Hr1G000540.1	Barley	golgi, vacuole	43.28	43.28
EER89908	Sorghum	plasma membrane, vacuole	42.91	43.23
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.62	43.21
TraesCS2A01G052900.1	Wheat	unclear	41.99	43.18
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	41.07	43.13
TraesCS2A01G051500.1	Wheat	peroxisome	27.07	43.11
TraesCS2B01G572400.1	Wheat	unclear	41.99	43.02
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	40.7	43.0
KXG26140	Sorghum	plasma membrane	42.36	42.99
KRH11825	Soybean	vacuole	41.25	42.91
TraesCS2D01G006000.1	Wheat	plastid	39.96	42.89
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	41.62	42.88
TraesCS2A01G052800.1	Wheat	plastid, vacuole	41.44	42.86
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	41.62	42.8
Zm00001d049169_P001	Maize	vacuole	41.62	42.8
KRH12123	Soybean	plastid	36.1	42.79
TraesCS2A01G542600.1	Wheat	vacuole	41.8	42.75
TraesCS3A01G111600.1	Wheat	vacuole	41.8	42.75
EES13185	Sorghum	vacuole	42.91	42.67
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	41.62	42.64
TraesCS2B01G066900.1	Wheat	nucleus, unclear	41.25	42.5
TraesCS4A01G081300.1	Wheat	unclear	44.2	42.48
TraesCS4B01G358600.1	Wheat	golgi	40.88	42.45
KXG28418	Sorghum	vacuole	41.25	42.42
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.25	42.42
TraesCS4B01G222500.1	Wheat	plasma membrane	44.2	42.4
EER89907	Sorghum	plasma membrane, vacuole	41.07	42.4
TraesCS2A01G052600.1	Wheat	vacuole	41.44	42.29
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	41.25	42.26
HORVU2Hr1G008300.1	Barley	plastid	40.88	42.21
TraesCS2D01G052300.1	Wheat	plastid	40.88	42.13
TraesCS5B01G302700.1	Wheat	vacuole	40.33	42.12
Zm00001d016199_P001	Maize	mitochondrion	43.46	42.07
TraesCS2B01G066800.1	Wheat	vacuole	40.88	42.05
TraesCS5D01G309100.1	Wheat	vacuole	40.33	42.03
TraesCS7B01G273800.1	Wheat	plasma membrane	40.33	42.03
TraesCS4D01G223000.1	Wheat	plasma membrane	43.65	41.87
TraesCS7D01G393900.1	Wheat	vacuole	40.15	41.68
TraesCS2D01G052700.1	Wheat	unclear	40.52	41.67
Os06t0548800-01	Rice	extracellular	40.7	41.62
TraesCS7A01G400100.1	Wheat	unclear	40.15	41.52
TraesCS4A01G212100.1	Wheat	vacuole	41.44	41.51
TraesCS2B01G016900.1	Wheat	vacuole	39.59	41.51
Os02t0235900-01	Rice	plasma membrane, vacuole	43.28	41.45
Zm00001d046319_P001	Maize	vacuole	40.15	41.44
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	39.78	41.38
TraesCS7A01G353800.1	Wheat	vacuole	39.59	41.35
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	39.59	41.35
TraesCS7D01G472000.1	Wheat	vacuole	39.59	41.19
TraesCS7B01G273900.1	Wheat	vacuole	39.41	41.15
Zm00001d037008_P001	Maize	golgi, vacuole	38.67	41.1
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	43.28	41.01
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	39.41	41.0
TraesCS4B01G104000.1	Wheat	vacuole	41.07	40.99
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	43.83	40.96
TraesCS2B01G145300.1	Wheat	plasma membrane	43.09	40.91
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.88	40.88
TraesCS4D01G101000.1	Wheat	golgi	40.88	40.88
HORVU7Hr1G089190.1	Barley	vacuole	39.41	40.76
HORVU7Hr1G093940.1	Barley	vacuole	39.78	40.75
TraesCS2B01G066400.1	Wheat	plastid	39.59	40.72
HORVU4Hr1G017270.1	Barley	vacuole	40.7	40.7
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	43.09	40.7
KXG29886	Sorghum	mitochondrion	43.46	40.62
TraesCS2A01G005700.1	Wheat	vacuole	37.02	40.61
Os11t0495950-00	Rice	plasma membrane, vacuole	40.33	40.56
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	43.09	40.41
HORVU2Hr1G013930.1	Barley	golgi, vacuole	40.52	40.29
TraesCS2D01G543700.1	Wheat	unclear	41.44	40.11
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.5	39.75
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	32.04	39.73
TraesCS2D01G052400.1	Wheat	vacuole	29.28	39.55
KRG92465	Soybean	golgi, vacuole	39.96	39.45
KRH34335	Soybean	vacuole	39.59	39.09
Zm00001d037009_P001	Maize	plasma membrane	41.8	38.74
KXG29885	Sorghum	plastid	35.73	38.72
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	41.07	38.38
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.7	38.17
TraesCS2B01G145500.1	Wheat	vacuole	40.88	38.14
HORVU7Hr1G089210.1	Barley	mitochondrion	40.33	35.67
HORVU7Hr1G026630.1	Barley	plastid	30.76	32.94
HORVU7Hr1G089260.1	Barley	mitochondrion	28.73	32.1

Protein Annotations

EntrezGene:100786800	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EMBL:ACUP02005398
InterPro:BBE	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	EnsemblPlantsGene:GLYMA_09G026900	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:I1L0H6	InterPro:IPR016166
InterPro:IPR016167	EnsemblPlants:KRH36839	ProteinID:KRH36839	ProteinID:KRH36839.1	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF35	SUPFAM:SSF56176	SignalP:SignalP-noTM
UniParc:UPI0001B63E2C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:2193502..2195575

Molecular Weight (calculated)

61212.4 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.222

Length

543 amino acids

Sequence
(BLAST)

001: MVSPISHLVT LILLLSVSLA ASASLEENFV QCLSFYSDKA APFYASIYTP QNASFNKILE SSAQNLRYLV PSAPKPELIF TPLTDSHVQV AVTCSKKLGI
101: HLRIRSGGHD YEGLSYVSEV ESPFIIVDLS KLRAIDVDIE DNTAWIQAGA TIGEVYYRIY EKSSVHGFPA GLCTSLGVGG HITGGAYGSM MRKYGLGADN
201: VVDARIVDAN GQILDREAMG EDLFWAIRGG GGASFGILLW WKIKLVPVPE TVTVFTVTRS LEQDATKILH RWQEVAPYID EDLFIRVIIQ PATVGNKTER
301: TITTSYNAQF LGGADRLLQV MKESFPELGL TKKDCLETSW IKSVLYIAGY PNDTPPEVLL QGKSTFKNYF KAKSDFVRDP IPETGLEGLW QRLLEEDSPL
401: MIWNPYGGMM SKFSESDIPF PHRNGTLYKI QYLTLWQDGD KNASKHEDWI RKLYNYMTPY VSKFPREAYV NYRDLDLGMN KKNSTSYIQA TAWGNMYFKD
501: NFNRLVKIKT KVDPDNVFRH EQSIPPLPVS SMRLKDKKCK TWE

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.