Factsheet for AT1G01980.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
plastid 1
vacuole 5
plasma membrane 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13353	Canola	plasma membrane	87.8	88.45
Bra028530.1-P	Field mustard	plasma membrane, vacuole	87.06	87.71
CDX67534	Canola	plasma membrane, vacuole	87.06	87.71
AT1G11770.1	Thale cress	vacuole	79.48	80.22
AT4G20840.1	Thale cress	plasma membrane	62.48	62.71
AT1G30740.2	Thale cress	vacuole	61.0	61.57
KRH11826	Soybean	nucleus	59.89	59.56
KRH36840	Soybean	nucleus	60.07	59.31
AT4G20830.1	Thale cress	vacuole	62.29	59.12
KRH36842	Soybean	vacuole	58.23	59.1
KRH36766	Soybean	vacuole	57.67	58.54
KRH36843	Soybean	vacuole	57.3	58.16
KRH11827	Soybean	vacuole	57.3	57.73
KRH42272	Soybean	vacuole	56.75	56.96
KRH11830	Soybean	vacuole	51.57	56.71
KRH42271	Soybean	endoplasmic reticulum	59.52	55.81
KRH58395	Soybean	endoplasmic reticulum	59.33	55.15
VIT_03s0017g01470.t01	Wine grape	vacuole	31.42	54.31
VIT_03s0017g01490.t01	Wine grape	vacuole	53.97	53.58
PGSC0003DMT400046308	Potato	extracellular	53.6	53.31
Solyc02g022850.1.1	Tomato	vacuole	52.87	52.87
KRH36841	Soybean	vacuole	38.26	52.67
VIT_10s0003g05450.t01	Wine grape	extracellular	55.08	51.92
VIT_03s0017g01420.t01	Wine grape	cytosol, peroxisome, vacuole	52.87	51.81
AT1G30700.1	Thale cress	vacuole	50.28	51.61
AT1G34575.1	Thale cress	vacuole	46.4	47.63
AT1G30710.1	Thale cress	extracellular, plasma membrane, vacuole	45.66	46.52
AT1G26390.1	Thale cress	vacuole	45.29	46.23
AT4G20800.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	45.1	46.21
AT1G30720.1	Thale cress	vacuole	44.55	45.73
AT1G26380.1	Thale cress	endoplasmic reticulum	44.92	45.42
AT4G20820.1	Thale cress	plastid	44.18	44.92
AT1G26420.1	Thale cress	vacuole	43.81	44.8
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	36.97	44.64
TraesCS1D01G443200.1	Wheat	cytosol	26.06	44.62
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.51	44.4
AT1G26400.1	Thale cress	golgi, vacuole	43.07	44.21
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.88	43.86
AT2G34810.1	Thale cress	vacuole	43.44	43.52
AT1G26410.1	Thale cress	golgi	44.36	43.48
TraesCS7B01G273700.1	Wheat	vacuole	41.77	43.46
AT2G34790.1	Thale cress	golgi, vacuole	42.7	43.42
TraesCS7A01G354100.1	Wheat	vacuole	34.75	43.22
AT1G30730.1	Thale cress	extracellular	41.96	43.16
TraesCS1D01G338700.1	Wheat	plasma membrane	42.7	43.1
TraesCS7D01G368800.1	Wheat	vacuole	41.4	43.08
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	41.59	43.02
Os06t0549900-01	Rice	extracellular	41.96	42.99
Os06t0548100-00	Rice	golgi	42.51	42.99
AT5G44390.1	Thale cress	vacuole	43.07	42.99
TraesCS7A01G353900.1	Wheat	vacuole	41.22	42.97
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.51	42.83
TraesCS2B01G017300.1	Wheat	plastid	32.35	42.79
TraesCS7B01G026000.1	Wheat	cytosol	26.25	42.77
HORVU2Hr1G008270.1	Barley	peroxisome	24.58	42.77
AT1G30760.2	Thale cress	golgi	43.62	42.75
TraesCS1B01G469800.1	Wheat	vacuole	42.51	42.75
AT5G44400.1	Thale cress	golgi, vacuole	42.33	42.64
AT5G44410.1	Thale cress	golgi	42.14	42.62
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	42.33	42.57
EER89910	Sorghum	vacuole	41.59	42.53
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.77	42.48
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.19	42.47
HORVU7Hr1G089160.3	Barley	vacuole	41.04	42.29
TraesCS2D01G151500.1	Wheat	vacuole	41.22	42.16
Zm00001d046318_P001	Maize	vacuole	41.22	42.0
HORVU2Hr1G000540.1	Barley	golgi, vacuole	42.14	41.99
KXG20147	Sorghum	vacuole	41.59	41.98
TraesCS7B01G273600.1	Wheat	vacuole	40.11	41.97
TraesCS7D01G368700.1	Wheat	unclear	40.11	41.97
TraesCS2B01G172300.1	Wheat	vacuole	41.04	41.97
TraesCS7A01G126600.1	Wheat	vacuole	40.3	41.92
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	40.3	41.92
TraesCS7B01G273500.1	Wheat	plastid	41.96	41.8
TraesCS7A01G354000.1	Wheat	vacuole	39.93	41.78
Os06t0548200-01	Rice	extracellular	41.22	41.76
TraesCS5A01G261400.1	Wheat	vacuole	40.48	41.71
KXG28418	Sorghum	vacuole	40.67	41.67
KXG20146	Sorghum	extracellular	41.04	41.65
TraesCS2A01G051500.1	Wheat	peroxisome	26.25	41.64
Zm00001d037005_P001	Maize	vacuole	40.3	41.6
TraesCS1B01G456900.1	Wheat	vacuole	38.26	41.57
HORVU7Hr1G089270.1	Barley	vacuole	40.85	41.54
TraesCS5D01G268800.1	Wheat	vacuole	40.3	41.52
TraesCS7D01G393900.1	Wheat	vacuole	40.11	41.49
Zm00001d046322_P001	Maize	extracellular	40.67	41.43
TraesCS4B01G391900.1	Wheat	vacuole	39.19	41.41
TraesCS2D01G006000.1	Wheat	plastid	38.63	41.3
TraesCS2B01G066400.1	Wheat	plastid	40.3	41.29
EER89909	Sorghum	extracellular, plasma membrane, vacuole	40.11	41.25
HORVU2Hr1G008300.1	Barley	plastid	40.11	41.25
TraesCS1A01G424100.1	Wheat	vacuole	38.82	41.18
TraesCS7A01G400100.1	Wheat	unclear	39.93	41.14
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	39.19	41.09
TraesCS2D01G052300.1	Wheat	plastid	39.93	40.99
Os06t0549633-00	Rice	vacuole	39.93	40.91
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.93	40.91
Zm00001d049169_P001	Maize	vacuole	39.93	40.91
TraesCS5D01G309100.1	Wheat	vacuole	39.37	40.88
EER89907	Sorghum	plasma membrane, vacuole	39.74	40.87
TraesCSU01G034600.1	Wheat	vacuole	38.82	40.78
TraesCS5B01G302700.1	Wheat	vacuole	39.19	40.77
TraesCS2A01G052800.1	Wheat	plastid, vacuole	39.56	40.76
HORVU7Hr1G093940.1	Barley	vacuole	39.93	40.75
TraesCS1D01G433600.1	Wheat	vacuole	40.67	40.74
HORVU1Hr1G092680.1	Barley	golgi, vacuole	40.3	40.67
TraesCS2B01G066900.1	Wheat	nucleus, unclear	39.56	40.61
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	39.74	40.57
TraesCS2A01G542600.1	Wheat	vacuole	39.74	40.49
EER89908	Sorghum	plasma membrane, vacuole	40.3	40.45
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.63	40.43
TraesCS2B01G016900.1	Wheat	vacuole	38.63	40.35
TraesCS2A01G052900.1	Wheat	unclear	39.37	40.34
Os06t0549600-01	Rice	extracellular	39.19	40.3
KXG20949	Sorghum	vacuole	40.11	40.11
EES13185	Sorghum	vacuole	40.48	40.11
TraesCS2B01G066800.1	Wheat	vacuole	39.0	39.96
Os06t0549300-00	Rice	extracellular	38.63	39.96
TraesCS4B01G358600.1	Wheat	golgi	38.63	39.96
Zm00001d046319_P001	Maize	vacuole	38.82	39.92
Zm00001d037008_P001	Maize	golgi, vacuole	37.71	39.92
TraesCS2A01G052600.1	Wheat	vacuole	39.19	39.85
HORVU2Hr1G008310.1	Barley	golgi, vacuole	39.93	39.78
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	30.5	39.76
HORVU2Hr1G013930.1	Barley	golgi, vacuole	40.11	39.74
TraesCS4A01G212100.1	Wheat	vacuole	39.74	39.67
KXG26140	Sorghum	plasma membrane	39.19	39.63
AT5G44360.2	Thale cress	golgi	40.11	39.6
TraesCS4D01G101000.1	Wheat	golgi	39.74	39.59
TraesCS2D01G052700.1	Wheat	unclear	38.63	39.58
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	41.22	39.47
TraesCS2B01G572400.1	Wheat	unclear	38.63	39.43
AT5G44380.2	Thale cress	mitochondrion, plastid	42.33	39.41
TraesCS3B01G070000.1	Wheat	mitochondrion	20.52	39.36
Os06t0548800-01	Rice	extracellular	38.45	39.17
TraesCS4B01G104000.1	Wheat	vacuole	39.37	39.15
HORVU2Hr1G122590.1	Barley	vacuole	38.63	39.07
AT4G20860.1	Thale cress	vacuole	38.26	39.06
HORVU4Hr1G017270.1	Barley	vacuole	39.19	39.04
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.08	38.87
HORVU7Hr1G089190.1	Barley	vacuole	37.71	38.86
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	37.34	38.85
TraesCS2A01G005700.1	Wheat	vacuole	35.49	38.79
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	37.71	38.64
TraesCS7A01G353800.1	Wheat	vacuole	36.97	38.46
TraesCS7B01G273800.1	Wheat	plasma membrane	36.97	38.39
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	36.97	38.31
TraesCS2D01G052400.1	Wheat	vacuole	28.47	38.31
TraesCS2B01G145300.1	Wheat	plasma membrane	40.48	38.29
TraesCS7B01G273900.1	Wheat	vacuole	36.78	38.27
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	37.15	38.14
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	30.87	38.13
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	36.78	38.12
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	40.3	37.91
TraesCS4B01G222500.1	Wheat	plasma membrane	39.56	37.81
TraesCS7D01G472000.1	Wheat	vacuole	36.41	37.74
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	40.3	37.65
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.11	37.48
TraesCS3A01G111600.1	Wheat	vacuole	36.78	37.48
Os02t0235900-01	Rice	plasma membrane, vacuole	39.19	37.39
TraesCS4A01G081300.1	Wheat	unclear	39.0	37.35
TraesCS4D01G223000.1	Wheat	plasma membrane	39.0	37.28
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	39.93	37.18
TraesCS2D01G543700.1	Wheat	unclear	38.45	37.08
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	39.74	37.01
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	39.19	37.0
TraesCS2B01G145500.1	Wheat	vacuole	39.74	36.94
Zm00001d016199_P001	Maize	mitochondrion	37.89	36.54
Os11t0495950-00	Rice	plasma membrane, vacuole	36.23	36.3
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	15.9	35.98
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	34.01	35.8
AT5G44440.2	Thale cress	golgi	39.56	35.49
KXG29886	Sorghum	mitochondrion	37.89	35.28
Zm00001d037009_P001	Maize	plasma membrane	37.89	34.98
HORVU7Hr1G089210.1	Barley	mitochondrion	38.63	34.04
KXG29885	Sorghum	plastid	30.87	33.33
HORVU7Hr1G026630.1	Barley	plastid	30.13	32.15
HORVU7Hr1G089260.1	Barley	mitochondrion	28.47	31.69

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EntrezGene:839296	UniProt:A0A178WKZ1
ProteinID:AAF76476.1	ProteinID:AEE27362.1	EMBL:AK220962	ArrayExpress:AT1G01980	EnsemblPlantsGene:AT1G01980	RefSeq:AT1G01980
TAIR:AT1G01980	RefSeq:AT1G01980-TAIR-G	EnsemblPlants:AT1G01980.1	TAIR:AT1G01980.1	Unigene:At.51264	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0016020	GO:GO:0016491	GO:GO:0016614	GO:GO:0016899	GO:GO:0030312	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	RefSeq:NP_171700.1	ProteinID:OAP18824.1
InterPro:Oxid_FAD_bind_N	PFAM:PF01565	PFAM:PF08031	PO:PO:0001016	PO:PO:0001017	PO:PO:0001185
PO:PO:0007611	PO:PO:0007616	PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF34	UniProt:Q9LPC3	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI00000481A1
SEG:seg	:	:	:	:	:

Description

SEC1ABerberine bridge enzyme-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC3]

Coordinates

chr1:-:340108..342040

Molecular Weight (calculated)

60106.1 Da

IEP (calculated)

9.151

GRAVY (calculated)

-0.219

Length

541 amino acids

Sequence
(BLAST)

001: MKLSCLVFLI VSSLVSSSLA TAPPNTSIYE SFLQCFSNQT GAPPEKLCDV VLPQSSASFT PTLRAYIRNA RFNTSTSPKP LLVIAARSEC HVQATVLCTK
101: SLNFQLKTRS GGHDYDGVSY ISNRPFFVLD MSYLRNITVD MSDDGGSAWV GAGATLGEVY YNIWQSSKTH GTHGFPAGVC PTVGAGGHIS GGGYGNMIRK
201: YGLSVDYVTD AKIVDVNGRI LDRKSMGEDL FWAIGGGGGA SFGVILSFKI KLVPVPPRVT VFRVEKTLVE NALDMVHKWQ FVAPKTSPDL FMRLMLQPVT
301: RNTTQTVRAS VVALFLGKQS DLMSLLTKEF PELGLKPENC TEMTWIQSVM WWANNDNATV IKPEILLDRN PDSASFLKRK SDYVEKEISK DGLDFLCKKL
401: MEAGKLGLVF NPYGGKMSEV ATTATPFPHR KRLFKVQHSM NWKDPGTDVE SSFMEKTRSF YSYMAPFVTK NPRHTYLNYR DLDIGINSHG PNSYREAEVY
501: GRKYFGENFD RLVKVKTAVD PENFFRDEQS IPTLPTKPSS S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.