Factsheet for PGSC0003DMT400080467

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
vacuole 7
extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065060.1.1	Tomato	extracellular	96.65	96.65
PGSC0003DMT400080465	Potato	cytosol	69.89	92.61
PGSC0003DMT400080468	Potato	vacuole	87.17	88.83
KRH58388	Soybean	vacuole	61.9	60.88
KRH42266	Soybean	vacuole	60.41	60.3
PGSC0003DMT400054571	Potato	cytosol	44.8	59.36
KRH58387	Soybean	plastid, vacuole	60.22	59.02
KRH58389	Soybean	nucleus	57.99	58.21
PGSC0003DMT400054385	Potato	plastid	53.53	58.18
PGSC0003DMT400054387	Potato	plasma membrane, vacuole	56.88	57.74
PGSC0003DMT400054391	Potato	cytosol, nucleus, peroxisome	45.91	57.31
PGSC0003DMT400054564	Potato	cytosol, plastid	52.23	56.88
PGSC0003DMT400054560	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.29	56.75
KRH58344	Soybean	vacuole	55.58	56.42
PGSC0003DMT400054386	Potato	vacuole	54.65	55.26
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	44.98	54.02
PGSC0003DMT400054574	Potato	mitochondrion, peroxisome	50.56	53.02
PGSC0003DMT400062414	Potato	plasma membrane, vacuole	52.97	51.44
PGSC0003DMT400054393	Potato	plasma membrane, vacuole	50.74	51.12
PGSC0003DMT400086243	Potato	vacuole	49.81	50.95
PGSC0003DMT400043091	Potato	extracellular	50.0	50.85
HORVU7Hr1G089270.1	Barley	vacuole	50.19	50.75
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	38.85	50.36
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	49.63	50.19
PGSC0003DMT400089776	Potato	golgi, vacuole	50.93	50.09
TraesCS1D01G443200.1	Wheat	cytosol	29.37	50.0
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	20.26	49.77
PGSC0003DMT400046308	Potato	extracellular	50.0	49.45
TraesCS7A01G354100.1	Wheat	vacuole	39.59	48.97
Os06t0548100-00	Rice	golgi	48.33	48.6
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	47.58	48.39
KXG20147	Sorghum	vacuole	47.96	48.13
TraesCS7B01G026000.1	Wheat	cytosol	29.55	47.89
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	46.1	47.88
KXG20146	Sorghum	extracellular	47.21	47.65
TraesCS7A01G354000.1	Wheat	vacuole	45.72	47.58
TraesCS7D01G368700.1	Wheat	unclear	45.54	47.39
EER89910	Sorghum	vacuole	46.47	47.26
TraesCS1D01G338700.1	Wheat	plasma membrane	47.03	47.2
TraesCS7B01G273600.1	Wheat	vacuole	45.35	47.2
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	47.03	47.03
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	49.26	46.9
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.65	46.74
TraesCS2B01G172300.1	Wheat	vacuole	45.91	46.69
Os06t0548200-01	Rice	extracellular	46.28	46.63
Zm00001d037005_P001	Maize	vacuole	45.35	46.56
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	44.98	46.54
HORVU7Hr1G089160.3	Barley	vacuole	45.35	46.48
TraesCS5D01G268800.1	Wheat	vacuole	45.35	46.48
TraesCS1B01G469800.1	Wheat	vacuole	46.47	46.47
Zm00001d046322_P001	Maize	extracellular	45.72	46.33
PGSC0003DMT400057680	Potato	extracellular, plasma membrane, vacuole	46.1	46.18
TraesCS7B01G273700.1	Wheat	vacuole	44.61	46.15
TraesCS7D01G368800.1	Wheat	vacuole	44.61	46.15
TraesCS5A01G261400.1	Wheat	vacuole	44.98	46.1
Zm00001d046318_P001	Maize	vacuole	45.35	45.95
TraesCS2D01G151500.1	Wheat	vacuole	45.17	45.94
TraesCS7A01G353900.1	Wheat	vacuole	44.24	45.86
PGSC0003DMT400036039	Potato	extracellular, plasma membrane, vacuole	47.21	45.85
Os06t0549900-01	Rice	extracellular	44.98	45.83
TraesCS1D01G433600.1	Wheat	vacuole	45.91	45.74
PGSC0003DMT400057528	Potato	extracellular	45.72	45.72
TraesCS1B01G456900.1	Wheat	vacuole	42.19	45.58
TraesCS7A01G126600.1	Wheat	vacuole	44.05	45.58
HORVU1Hr1G092680.1	Barley	golgi, vacuole	45.35	45.52
TraesCS1A01G424100.1	Wheat	vacuole	43.12	45.49
Os06t0549600-01	Rice	extracellular	44.42	45.44
PGSC0003DMT400009569	Potato	cytosol	40.15	45.38
KXG20949	Sorghum	vacuole	45.35	45.1
EER89909	Sorghum	extracellular, plasma membrane, vacuole	44.05	45.06
HORVU2Hr1G008270.1	Barley	peroxisome	26.02	45.02
TraesCS2B01G572400.1	Wheat	unclear	44.24	44.91
TraesCS2A01G542600.1	Wheat	vacuole	44.24	44.82
TraesCS7B01G273500.1	Wheat	plastid	45.17	44.75
TraesCS2B01G017300.1	Wheat	plastid	34.01	44.74
PGSC0003DMT400012979	Potato	cytosol	33.09	44.72
TraesCS5D01G309100.1	Wheat	vacuole	43.31	44.72
TraesCS2B01G066900.1	Wheat	nucleus, unclear	43.68	44.59
TraesCS2A01G051500.1	Wheat	peroxisome	28.25	44.57
TraesCS4B01G391900.1	Wheat	vacuole	42.38	44.53
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	43.87	44.53
TraesCS2D01G052300.1	Wheat	plastid	43.49	44.4
TraesCS2A01G052800.1	Wheat	plastid, vacuole	43.31	44.38
TraesCS2A01G052600.1	Wheat	vacuole	43.87	44.36
Os06t0549300-00	Rice	extracellular	43.12	44.36
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.49	44.32
HORVU2Hr1G122590.1	Barley	vacuole	44.05	44.3
TraesCSU01G034600.1	Wheat	vacuole	42.38	44.27
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	42.94	44.17
TraesCS2D01G052700.1	Wheat	unclear	43.31	44.13
TraesCS5B01G302700.1	Wheat	vacuole	42.57	44.04
HORVU2Hr1G000540.1	Barley	golgi, vacuole	44.42	44.01
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	42.19	43.99
TraesCS3B01G070000.1	Wheat	mitochondrion	23.05	43.97
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	42.01	43.97
TraesCS7A01G400100.1	Wheat	unclear	42.75	43.81
TraesCS7D01G393900.1	Wheat	vacuole	42.57	43.79
TraesCS2A01G052900.1	Wheat	unclear	42.94	43.75
TraesCS2B01G066400.1	Wheat	plastid	42.94	43.75
HORVU2Hr1G008300.1	Barley	plastid	42.75	43.73
TraesCS2D01G006000.1	Wheat	plastid	41.08	43.68
EES13185	Sorghum	vacuole	44.24	43.59
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	42.57	43.45
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	42.75	43.4
KXG28418	Sorghum	vacuole	42.57	43.37
Zm00001d049169_P001	Maize	vacuole	42.57	43.37
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	41.64	43.33
Os06t0548800-01	Rice	extracellular	42.75	43.31
TraesCS4B01G358600.1	Wheat	golgi	42.01	43.21
Os06t0549633-00	Rice	vacuole	42.38	43.18
TraesCS2B01G066800.1	Wheat	vacuole	42.38	43.18
TraesCS3A01G111600.1	Wheat	vacuole	42.57	43.13
EER89908	Sorghum	plasma membrane, vacuole	43.12	43.04
TraesCS3B01G132200.1	Wheat	extracellular, plasma membrane, vacuole	42.19	42.99
HORVU7Hr1G093940.1	Barley	vacuole	42.19	42.83
EER89907	Sorghum	plasma membrane, vacuole	41.82	42.78
Zm00001d046319_P001	Maize	vacuole	41.82	42.78
Zm00001d037008_P001	Maize	golgi, vacuole	40.52	42.66
PGSC0003DMT400057523	Potato	extracellular, golgi, vacuole	44.42	42.45
TraesCS2B01G016900.1	Wheat	vacuole	40.71	42.28
HORVU2Hr1G008310.1	Barley	golgi, vacuole	42.57	42.17
TraesCS4D01G101000.1	Wheat	golgi	42.57	42.17
TraesCS2D01G543700.1	Wheat	unclear	43.87	42.07
TraesCS4A01G212100.1	Wheat	vacuole	42.38	42.07
KXG26140	Sorghum	plasma membrane	41.82	42.06
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	40.52	41.92
HORVU2Hr1G013930.1	Barley	golgi, vacuole	42.38	41.76
TraesCS7A01G353800.1	Wheat	vacuole	40.33	41.73
TraesCS4B01G104000.1	Wheat	vacuole	42.19	41.73
TraesCS7B01G273800.1	Wheat	plasma membrane	40.33	41.65
HORVU4Hr1G017270.1	Barley	vacuole	42.01	41.62
TraesCS7B01G388200.1	Wheat	extracellular, plasma membrane, vacuole	40.33	41.57
TraesCS7B01G273900.1	Wheat	vacuole	40.15	41.54
TraesCS4B01G222500.1	Wheat	plasma membrane	43.68	41.52
TraesCS2A01G005700.1	Wheat	vacuole	38.1	41.41
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	40.15	41.38
HORVU7Hr1G089190.1	Barley	vacuole	40.33	41.33
TraesCS7D01G472000.1	Wheat	vacuole	39.96	41.19
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	33.46	41.1
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	43.68	41.01
TraesCS4A01G081300.1	Wheat	unclear	42.94	40.88
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	43.68	40.87
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	43.87	40.76
Os02t0235900-01	Rice	plasma membrane, vacuole	42.94	40.74
TraesCS2B01G145300.1	Wheat	plasma membrane	43.31	40.73
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	43.87	40.62
Os11t0495950-00	Rice	plasma membrane, vacuole	40.71	40.56
TraesCS2D01G052400.1	Wheat	vacuole	30.3	40.55
TraesCS4D01G223000.1	Wheat	plasma membrane	42.57	40.46
Zm00001d037009_P001	Maize	plasma membrane	44.05	40.44
Zm00001d016199_P001	Maize	mitochondrion	41.45	39.75
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	17.66	39.75
TraesCS2D01G126400.1	Wheat	golgi, vacuole	42.19	39.21
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	42.01	38.9
TraesCS2B01G145500.1	Wheat	vacuole	42.01	38.83
KXG29886	Sorghum	mitochondrion	41.26	38.21
KXG29885	Sorghum	plastid	33.83	36.33
HORVU7Hr1G089210.1	Barley	mitochondrion	41.45	36.32
HORVU7Hr1G026630.1	Barley	plastid	31.23	33.14
HORVU7Hr1G089260.1	Barley	mitochondrion	29.93	33.13

Protein Annotations

EntrezGene:102595684	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	UniProt:M1D3J5	InterPro:Oxid_FAD_bind_N
PFAM:PF01565	PFAM:PF08031	EnsemblPlantsGene:PGSC0003DMG400031326	PGSC:PGSC0003DMG400031326	EnsemblPlants:PGSC0003DMT400080467	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF53	SUPFAM:SSF56176	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296113A
RefSeq:XP_006356501.1	SEG:seg	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400031326]

Coordinates

chr6:+:46983362..46985191

Molecular Weight (calculated)

60846.8 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.136

Length

538 amino acids

Sequence
(BLAST)

001: MKISWFSFIF VLVVLSSASW SALADNHEEF IQCLSHSNQT SSNIYTPNNS SFPSILQFSI QNLRFNTTET PKPLVIVTPV SESEVQRVIL CSKKTGMHVR
101: VRGAGHDYEG LSYVSEVPFV IVDLINLRTI NVDVNDKSAW VEAGSTIGEL YYRIAEKSKT LGFPAGVCPT VGVGGHFSGG GYGVMLRKYG LAADNIVDAR
201: LIDANGRILD RVSMGEDLFW AIRGGGGNTF GLVLAWKIKL VDVPEIVTVF TLDKTLEQNA TKLVHRWQYV APRFHEDLFI RILVSKLNSS NQGDGNNQQT
301: IVASFNSIFL GGIDRLLPIM KENFPELGLR REDCIEMSWI ESIMYFAGFP TDGPLDVLLS RVQLSTRYFK AKSDYVYQPI PEGGLEGIWR FFFEDEAQSS
401: QVILSPYGGR MDEISPSAIP FPHRAGNLYK IQHLVYWDEE GEEVAERHIS WIRRLYSYMA PFVSKLPRAA YINYRDLDIG VNNIKGYTSY VQAKVWGIKY
501: FKNNFDRLVH VKTKVDPSNF FRNEQSIPSL TQWKNKGE

Best Arabidopsis Sequence Match ( AT4G20820.1 )
(BLAST)

001: MKFQSFFSSV LIFFTTSTLL LSIPHPVSAN RSNQSSFLQC LSLQLNDSNI VSKVIHTPND TSFSSVLASS IQNQRFSAPD VPKPVLILTP VQPSDVQSAV
101: KCARRFGIHI RTRSGGHDYE GLSYVTHKPF VILDLRNLRS ITVDVDNRSV WVQTGATIGE LYYEIGKKNR TLAFPAGVCP TVGVGGHFSG GGYGTLLRKH
201: GLAADHVIDA RVVDARGRIL ERREMGEDFF WAIRGGGGSS FCVVLSWKIG LINVPSTVTV FNVTKFSEQS ALKIIHRWQF VADKVSDDLF IRVMLQRYKN
301: MVRASFPGLY LGSVKNLLKM VNKEFPELGL EEDDCTEMSW IESVIWFAEL GEEPINVLTK RTRASLAFKA KSDFVQEPMP KTAISKLWRR LQEPEAEHAQ
401: LIFTPFGGKM SEIADYETPF PHRKGNIYEI QYLNYWRGDV KEKYMRWVER VYDDMSEFVA KSPRGAYINL RDLDLGMYVG VKRSKYEEGK SWGVKYFKNN
501: FERLVRVKTS VDPSDFFCDE QSIPPFTFVE VI

Arabidopsis Description

Berberine bridge enzyme-like 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.