Factsheet for Zm00001d049141_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28215	Sorghum	nucleus	71.83	71.23
Zm00001d004697_P001	Maize	nucleus	67.32	68.48
Os11t0221000-01	Rice	nucleus	40.56	50.0
TraesCS4A01G204900.1	Wheat	nucleus	50.14	49.31
TraesCS4B01G108600.2	Wheat	nucleus	49.86	49.17
HORVU4Hr1G016160.1	Barley	plastid	48.17	47.63
TraesCS4D01G105700.1	Wheat	cytosol	49.58	46.81
Zm00001d049715_P001	Maize	nucleus	20.56	31.33
GSMUA_Achr6P29100_001	Banana	nucleus	21.69	26.01
Zm00001d008201_P001	Maize	cytosol	9.3	25.38
Zm00001d000288_P001	Maize	cytosol	13.8	24.87
GSMUA_Achr9P08370_001	Banana	nucleus	17.75	24.8
Zm00001d010360_P001	Maize	cytosol, nucleus	15.77	24.56
Zm00001d039513_P001	Maize	cytosol, nucleus, plastid	15.77	24.45
Zm00001d018414_P001	Maize	nucleus	13.8	23.79
Zm00001d045203_P001	Maize	cytosol	14.37	23.61
Zm00001d040541_P001	Maize	nucleus, plastid	11.55	22.65
Zm00001d037691_P003	Maize	cytosol, nucleus	15.21	21.86
Zm00001d051911_P002	Maize	nucleus	17.46	21.09
Zm00001d016277_P002	Maize	nucleus	17.18	20.4
Zm00001d043515_P002	Maize	cytosol, mitochondrion, nucleus	17.75	17.65
Zm00001d038784_P001	Maize	nucleus	16.06	16.15

Protein Annotations

EntrezGene:100273821	Gene3D:3.10.20.90	MapMan:35.1	ProteinID:AQK49690.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
InterPro:IPR000270	UniProt:K7TVT3	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF35	SUPFAM:SSF54277	UniParc:UPI000220DD02	EnsemblPlantsGene:Zm00001d049141	EnsemblPlants:Zm00001d049141_P002	EnsemblPlants:Zm00001d049141_T002
SEG:seg	:	:	:	:	:

Description

Aux/IAA-transcription factor 14Auxin-responsive protein IAA26

Coordinates

chr4:+:17575403..17583311

Molecular Weight (calculated)

36403.4 Da

IEP (calculated)

8.148

GRAVY (calculated)

-0.332

Length

355 amino acids

Sequence
(BLAST)

001: MLNLAPFETP PLGRQERPTN TIVTATAAIA RGNEESSSNT CLQHGHLDLS LGISLSHGGG GGGGSCDASS CGGNKQDSYG GGQGSRDDKD NNVRRMTSCI
101: GGTATANVIT AGHSSLAGDL TAAPGGGGGG GWAAAFMPSP TGFMHPWSLA ARQQKAAAEQ DRTPPATYLS SSDDRVVTSP SAVGWPPVHT SRRNIVSAMH
201: VITNKQTAGA SSAVAGNGGT PPGSTTTATH TGGGETNGAA AAALAARPAL AASSMFAKVH MEGYAIGRKV NLRAQDGYDS LSRTLTNMAT NFFCPADCSG
301: AAEKDAPKSD KFIFLYEDFE GDRMLVGDVP WELFLASAKG LYIVRKPSIR RQRSG

Best Arabidopsis Sequence Match ( AT1G51950.1 )
(BLAST)

001: MEGYSRNGEI SPKLLDLMIP QERRNWFHDE KNSVFKTEEK KLELKLGPPG EEDDDESMIR HMKKEPKDKS ILSLAGKYFS PSSTKTTSHK RTAPGPVVGW
101: PPVRSFRKNL ASGSSSKLGN DSTTSNGVTL KNQKCDAAAK TTEPKRQGGM FVKINMYGVP IGRKVDLSAH NSYEQLSFTV DKLFRGLLAA QRDFPSSIED
201: EKPITGLLDG NGEYTLTYED NEGDKMLVGD VPWQMFVSSV KRLRVIKTSE ISSALTYGNG KQEKMRR

Arabidopsis Description

IAA18Auxin-responsive protein IAA18 [Source:UniProtKB/Swiss-Prot;Acc:O24408]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.