Factsheet for HORVU4Hr1G016160.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G108600.2	Wheat	nucleus	87.74	87.5
TraesCS4A01G204900.1	Wheat	nucleus	85.79	85.32
TraesCS4D01G105700.1	Wheat	cytosol	83.57	79.79
Os11t0221000-01	Rice	nucleus	42.06	52.43
KXG28215	Sorghum	nucleus	52.09	52.23
Zm00001d004697_P001	Maize	nucleus	47.63	49.0
Zm00001d049141_P002	Maize	nucleus	47.63	48.17
HORVU7Hr1G026970.2	Barley	cytosol	13.65	29.17
GSMUA_Achr9P08370_001	Banana	nucleus	20.33	28.74
HORVU6Hr1G088140.2	Barley	cytosol, mitochondrion, nucleus	13.37	27.59
HORVU1Hr1G028170.4	Barley	cytosol, nucleus, plastid	18.11	26.32
HORVU3Hr1G019750.4	Barley	cytosol, nucleus, plastid	17.55	25.71
GSMUA_Achr6P29100_001	Banana	nucleus	21.17	25.68
HORVU7Hr1G077110.10	Barley	nucleus	22.01	24.53
HORVU6Hr1G091260.3	Barley	nucleus	16.71	21.35
HORVU3Hr1G070620.5	Barley	cytosol, mitochondrion, nucleus	19.22	19.55
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	10.31	17.87

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G016160	EnsemblPlants:HORVU4Hr1G016160.1
InterPro:IPR000270	UniProt:M0Z119	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF35	SUPFAM:SSF54277	UniParc:UPI000296F0D8	:	:	:

Description

Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:M0Z119]

Coordinates

chrchr4H:+:65195751..65201028

Molecular Weight (calculated)

37715.4 Da

IEP (calculated)

7.166

GRAVY (calculated)

-0.248

Length

359 amino acids

Sequence
(BLAST)

001: MMNLISFETP PPLGRQQSTA ATAVTGMKVA TEASSSGACF HGSNLDLSLG ISLSPGGNCS AAICGDSVMA SYKGRPGDGN VGRVQGSGLV VASTATANTL
101: STGRDGNCHG IVPSSSWTAA FMPSPTGFMH PWSLAARQQK AAAEQDRSIA PTSVATTYVT SDASVVSLPS AAVGWPPVHT SRRHLVTAVP KPDADVKQPD
201: GPKDGRIPAA ASPGADDDKE VAGAPRSCTV AVEPQRLPAN MFAKVQMDGC LIVRKINLRA HRSYDSLSRA LTKMTRNFFC PADYQNSDSG EGDCANSDNF
301: IFLYEDFEGD RMLVGDVPWE LFLASAKKLC IARHPTARDT KGHDEAIKLD ASVKLSTNN

Best Arabidopsis Sequence Match ( AT3G16500.1 )
(BLAST)

001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH

Arabidopsis Description

IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.