Factsheet for HORVU7Hr1G077110.10

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G222900.1	Wheat	nucleus	72.67	92.86
TraesCS7A01G322000.1	Wheat	nucleus	77.64	92.59
TraesCS7D01G318900.2	Wheat	plastid	87.89	87.08
Os08t0109400-01	Rice	nucleus	51.24	67.07
EES13224	Sorghum	nucleus	43.17	57.68
Zm00001d049715_P001	Maize	nucleus	39.75	54.94
GSMUA_Achr7P03120_001	Banana	nucleus	37.27	48.78
HORVU6Hr1G088140.2	Barley	cytosol, mitochondrion, nucleus	17.08	31.61
HORVU7Hr1G026970.2	Barley	cytosol	16.15	30.95
HORVU1Hr1G028170.4	Barley	cytosol, nucleus, plastid	20.19	26.32
HORVU3Hr1G019750.4	Barley	cytosol, nucleus, plastid	18.63	24.49
HORVU6Hr1G091260.3	Barley	nucleus	19.88	22.78
HORVU4Hr1G016160.1	Barley	plastid	24.53	22.01
HORVU3Hr1G070620.5	Barley	cytosol, mitochondrion, nucleus	22.05	20.11
HORVU1Hr1G017770.6	Barley	cytosol, mitochondrion, vacuole	11.8	18.36

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G077110	EnsemblPlants:HORVU7Hr1G077110.10
InterPro:IPR000270	UniProt:M0Y9P1	InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734
PANTHER:PTHR31734:SF19	SUPFAM:SSF54277	UniParc:UPI00029682ED	SEG:seg	:	:

Description

Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:M0Y9P1]

Coordinates

chrchr7H:+:451174148..451176738

Molecular Weight (calculated)

35688.2 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.594

Length

322 amino acids

Sequence
(BLAST)

001: MVGQCCRLLL QDEDIHYTQH KFTCFIANSL SGKRLRWTEV SAGAPIATAS PLGHKTQVVV KYQSYSLGEA MKSSSVAPSL KQEQVHASKL REGVLNNLEL
101: RLGISSDNGL SSGGGGATTP WLGVGVHPWS LSARQDKAAL EQPQQRPNEC PAHREDRPQL VGWPPVRTFR KNLSATSTRP VYSEDLSKVE PSYEENDHGN
201: INAGVSVQER PAMFVKVNLE GYAVGRKIDL NAHRGYGSLS SALQSMFHGF LSDGHGKIAT REDEERPEYH KGKGTMKNYI LLYEDNEGDR MLVGDVPWEL
301: FVASVKRLYI AKDPRADRSN KK

Best Arabidopsis Sequence Match ( AT3G16500.1 )
(BLAST)

001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH

Arabidopsis Description

IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.