Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G222900.1 | Wheat | nucleus | 88.89 | 95.24 |
| TraesCS7D01G318900.2 | Wheat | plastid | 96.67 | 80.31 |
| HORVU7Hr1G077110.10 | Barley | nucleus | 92.59 | 77.64 |
| Os08t0109400-01 | Rice | nucleus | 61.85 | 67.89 |
| EES13224 | Sorghum | nucleus | 51.85 | 58.09 |
| Zm00001d049715_P001 | Maize | nucleus | 47.41 | 54.94 |
| GSMUA_Achr7P03120_001 | Banana | nucleus | 44.07 | 48.37 |
| TraesCS7A01G129000.1 | Wheat | nucleus | 12.59 | 41.46 |
| TraesCS6A01G373300.1 | Wheat | cytosol, nucleus, plastid | 20.0 | 30.86 |
| TraesCS1A01G122600.2 | Wheat | nucleus | 25.19 | 30.22 |
| TraesCS3A01G108400.1 | Wheat | cytosol, nucleus, peroxisome | 22.96 | 24.6 |
| TraesCS6A01G392600.3 | Wheat | cytosol, nucleus, plastid | 23.33 | 22.11 |
| TraesCS3A01G276500.1 | Wheat | cytosol, mitochondrion, nucleus | 26.3 | 20.82 |
| TraesCS1A01G343300.1 | Wheat | nucleus | 22.59 | 20.75 |
| TraesCS4A01G204900.1 | Wheat | nucleus | 27.41 | 20.5 |
| TraesCS1A01G082700.2 | Wheat | plastid | 17.41 | 17.87 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000270 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF19 | SUPFAM:SSF54277 |
| EnsemblPlantsGene:TraesCS7A01G322000 | EnsemblPlants:TraesCS7A01G322000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7A:-:466203328..466207164
Molecular Weight (calculated)
29768.1 Da
IEP (calculated)
8.215
GRAVY (calculated)
-0.676
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQTQVVVKY QSYSLGEAMK SSSVAPSLKQ KQGDASKLQD GVPNNLELRL GISSDNGLSS GGGGATTPWL GVGVHPWSLS ARQDKAALEQ PQQRPNECPA
101: HREDRPQLVG WPPVRTFRKN LSATSTRPAY SGDLSKVEPC YEEEDHGNIN TGVSVQERPA MFVKVNLEGY AVGRKIDLKA HHGYGSLSGA LQSMFHGFLS
201: DGHGRIATRE DEEQLEYHKG KGTMKNYILL YEDNEGDRML VGDVPWELFV ASVKRLYIAK DPRADKSNKK
101: HREDRPQLVG WPPVRTFRKN LSATSTRPAY SGDLSKVEPC YEEEDHGNIN TGVSVQERPA MFVKVNLEGY AVGRKIDLKA HHGYGSLSGA LQSMFHGFLS
201: DGHGRIATRE DEEQLEYHKG KGTMKNYILL YEDNEGDRML VGDVPWELFV ASVKRLYIAK DPRADKSNKK
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.