Factsheet for TraesCS7D01G318900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G322000.1	Wheat	nucleus	80.31	96.67
TraesCS7B01G222900.1	Wheat	nucleus	73.85	95.24
HORVU7Hr1G077110.10	Barley	nucleus	87.08	87.89
Os08t0109400-01	Rice	nucleus	50.77	67.07
EES13224	Sorghum	nucleus	42.77	57.68
Zm00001d049715_P001	Maize	nucleus	39.69	55.36
GSMUA_Achr7P03120_001	Banana	nucleus	36.31	47.97
TraesCS7D01G128200.1	Wheat	cytosol, mitochondrion	14.46	46.08
TraesCS7D01G127900.1	Wheat	nucleus	16.31	35.33
TraesCS7D01G128100.1	Wheat	nucleus	16.0	32.5
TraesCS6D01G357500.1	Wheat	cytosol, mitochondrion, nucleus	16.62	31.4
TraesCS7D01G127800.1	Wheat	cytosol	14.77	30.38
TraesCS1D01G123500.1	Wheat	nucleus	20.31	29.07
TraesCS3D01G110200.1	Wheat	nucleus	18.46	26.09
TraesCS6D01G378300.1	Wheat	cytosol, nucleus, plastid	19.38	22.26
TraesCS1D01G084100.1	Wheat	nucleus, plastid	14.15	22.22
TraesCS3D01G276600.1	Wheat	cytosol, mitochondrion, nucleus	21.85	21.19
TraesCS1D01G345400.1	Wheat	nucleus	18.77	20.68
TraesCS4D01G105700.1	Wheat	cytosol	22.46	19.41

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	InterPro:AUX/IAA_dom	InterPro:AUX_IAA	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR000270
InterPro:PB1_dom	PFAM:PF02309	PFscan:PS51745	PANTHER:PTHR31734	PANTHER:PTHR31734:SF19	SUPFAM:SSF54277
EnsemblPlantsGene:TraesCS7D01G318900	EnsemblPlants:TraesCS7D01G318900.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:-:407713718..407715926

Molecular Weight (calculated)

35320.8 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.566

Length

325 amino acids

Sequence
(BLAST)

001: MQRGKSMKAS SGACSGSVLL LSKLPISGRA NSLSGKRLRW TEVSAGAPIA TASPLRHKTQ VVVKYQSYSL GEAMKSSSVA PSLKQKQGDA SKLQEGVPNN
101: LELRLGISSD NGLSSGGGGA TTPWLGVGVH PWSLSARQDK AALEQPQQRP NECPAHREDR PQLVGWPPVR TFRKNLSATS TRPAYSEDLS KVEPCYEEED
201: HGNINTGVSV QEGPAMFVKV NLEGYAVGRK IDLNAHCGYG SLSGALQSMF HGFLSDGHGR IVTREDEEQL EYHKGKGTVK NYILLYEDNE GDRMLVGDVP
301: WELFVASVKR LYIAKDPRAD KSNKK

Best Arabidopsis Sequence Match ( AT3G16500.1 )
(BLAST)

001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH

Arabidopsis Description

IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.