Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G322000.1 | Wheat | nucleus | 95.24 | 88.89 |
| TraesCS7D01G318900.2 | Wheat | plastid | 95.24 | 73.85 |
| HORVU7Hr1G077110.10 | Barley | nucleus | 92.86 | 72.67 |
| Os08t0109400-01 | Rice | nucleus | 66.67 | 68.29 |
| EES13224 | Sorghum | nucleus | 54.76 | 57.26 |
| Zm00001d049715_P001 | Maize | nucleus | 50.0 | 54.08 |
| GSMUA_Achr7P03120_001 | Banana | nucleus | 46.83 | 47.97 |
| TraesCS6B01G411000.1 | Wheat | cytosol, mitochondrion, nucleus | 21.03 | 29.94 |
| TraesCS7B01G029000.1 | Wheat | cytosol | 20.24 | 29.65 |
| TraesCS7B01G029100.1 | Wheat | nucleus | 19.84 | 28.25 |
| TraesCS3B01G127400.1 | Wheat | nucleus | 23.81 | 26.09 |
| TraesCS6B01G432800.1 | Wheat | nucleus | 25.79 | 23.47 |
| TraesCS1B01G356600.1 | Wheat | cytosol | 25.0 | 21.21 |
| TraesCS3B01G310500.1 | Wheat | cytosol, mitochondrion, nucleus | 28.57 | 20.99 |
| TraesCS4B01G108600.2 | Wheat | nucleus | 29.37 | 20.56 |
| TraesCS1B01G100300.1 | Wheat | plastid | 19.05 | 20.25 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000270 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF19 | SUPFAM:SSF54277 |
| EnsemblPlantsGene:TraesCS7B01G222900 | EnsemblPlants:TraesCS7B01G222900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:-:418857032..418858510
Molecular Weight (calculated)
27772.6 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.694
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSSVAPSL KQEQGDASKL QEGVLNNLEL RLGISSDNGL SSGGGGATTP WLGVGVHPWS LSARQDKAAL EQPQERPNEC PAHREDRPQL VGWPPVRTFR
101: KNLSATSTRP AYSEDLSKVE HCYEEEDHGN INTGVAVQER PAMFVKVNLE GYAVGRKIDL NAHRGYGSLS GALQSMFHGF LSDGHGRIAT RGGEEQLEYH
201: KGKGTMKNYI LLYEDNEGDR MLVGDVPWEL FVASVKRLYI ARDPRADKSN KK
101: KNLSATSTRP AYSEDLSKVE HCYEEEDHGN INTGVAVQER PAMFVKVNLE GYAVGRKIDL NAHRGYGSLS GALQSMFHGF LSDGHGRIAT RGGEEQLEYH
201: KGKGTMKNYI LLYEDNEGDR MLVGDVPWEL FVASVKRLYI ARDPRADKSN KK
001: MEGCPRNREI GPKLLDLIPQ GRKWYQEDKN NTDQEKKLEL RLGPPGGDEE DHSAIKKKNT EIRNIKKETE DKSFHCFNGN HFSPSNKTTS VPHISQKRTA
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
101: PGPVVGWPPV RSFRKNLAST SSSKLGNESS HGGQINKSDD GEKQVETKKE GMFVKINMDG VPIGRKVDLN AYNSYEQLSF VVDKLFRGLL AAQRDISDGQ
201: GEEKPIIGLL DGKGEFTLTY EDNEGDKMLV GDVPWQMFVS SVKRLRVIKS SEISSALTFG CSKQEKMMH
Arabidopsis Description
IAA26Auxin-responsive protein IAA26 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAL2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.