Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035185.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY39982 | Canola | cytosol | 86.7 | 92.09 |
| AT1G80390.1 | Thale cress | cytosol | 44.68 | 65.12 |
| KRH71336 | Soybean | nucleus | 15.96 | 56.6 |
| KRH31615 | Soybean | nucleus | 19.15 | 49.32 |
| HORVU5Hr1G081180.1 | Barley | cytosol, nucleus | 23.94 | 46.88 |
| TraesCS5A01G317200.1 | Wheat | cytosol | 29.79 | 42.11 |
| TraesCS5B01G317800.1 | Wheat | cytosol | 29.79 | 42.11 |
| TraesCS5D01G323500.1 | Wheat | cytosol | 29.79 | 42.11 |
| CDX97478 | Canola | nucleus | 23.94 | 39.47 |
| Os09t0527700-01 | Rice | nucleus | 29.26 | 39.29 |
| Zm00001d021279_P002 | Maize | plastid | 28.72 | 38.85 |
| EER97080 | Sorghum | plastid | 28.72 | 38.3 |
| CDY35250 | Canola | cytosol, nucleus, plastid | 17.55 | 37.93 |
| CDY14220 | Canola | nucleus | 21.28 | 32.26 |
| HORVU1Hr1G081910.1 | Barley | plastid | 20.74 | 29.32 |
| TraesCS2B01G591500.1 | Wheat | mitochondrion | 22.87 | 29.05 |
| TraesCS2A01G592700.1 | Wheat | cytosol | 21.28 | 25.32 |
| TraesCS2D01G561800.1 | Wheat | mitochondrion | 22.34 | 25.0 |
| TraesCS2A01G592900.1 | Wheat | plastid | 21.28 | 22.47 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | GO:A0A078DE18 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlants:CDX87307 |
| ProteinID:CDX87307 | ProteinID:CDX87307.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00146271001 | InterPro:IPR000270 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF34 | SUPFAM:SSF54277 | UniParc:UPI0002541E92 | : | : |
Description
BnaA07g35660D
Coordinates
chrLK031850:-:101746..102866
Molecular Weight (calculated)
21296.8 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.205
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPEEYVRES GDLRGTELTL ALPGTSIIAS DGRQKSRNKR SFIETVDLKL GERHVNNSIA CNNFDRLVGW PPVRMVRARK YVKVAVDGAA YLRKVDLQMY
101: NCYDQLFAAL ESMFQGVVTI CKVTTELERN GEFMATYEDK DGDWMLVGDV PWMMFVESCK RMRLMKAADA MGLGNNSFVT CNIINLNI
101: NCYDQLFAAL ESMFQGVVTI CKVTTELERN GEFMATYEDK DGDWMLVGDV PWMMFVESCK RMRLMKAADA MGLGNNSFVT CNIINLNI
001: MSPEEYVRVW PDSGDLGGTE LTLALPGTPT NASEGPKKFG NKRRFLETVD LKLGEAHENN YISSMVTNDQ LVGWPPVATA RKTVRRKYVK VALDGAAYLR
101: KVDLGMYDCY GQLFTALENM FQGIITICK
101: KVDLGMYDCY GQLFTALENM FQGIITICK
Arabidopsis Description
IAA15indole-3-acetic acid inducible 15 [Source:TAIR;Acc:AT1G80390]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.