Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G591500.1 | Wheat | mitochondrion | 64.88 | 73.65 |
| TraesCS2A01G592900.1 | Wheat | plastid | 60.71 | 57.3 |
| TraesCS2A01G592700.1 | Wheat | cytosol | 51.79 | 55.06 |
| KRH31615 | Soybean | nucleus | 16.07 | 36.99 |
| TraesCS5D01G323500.1 | Wheat | cytosol | 27.38 | 34.59 |
| KRH71336 | Soybean | nucleus | 9.52 | 30.19 |
| HORVU1Hr1G081910.1 | Barley | plastid | 23.21 | 29.32 |
| CDY14220 | Canola | nucleus | 19.64 | 26.61 |
| CDX97478 | Canola | nucleus | 17.86 | 26.32 |
| Bra010338.1-P | Field mustard | cytosol, nucleus, plastid | 18.45 | 26.05 |
| CDY39982 | Canola | cytosol | 25.6 | 24.29 |
| Bra035185.1-P | Field mustard | cytosol | 25.0 | 22.34 |
| CDX87307 | Canola | cytosol | 25.0 | 22.34 |
| AT1G80390.1 | Thale cress | cytosol | 16.07 | 20.93 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.2 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR000270 |
| InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 | PANTHER:PTHR31734 | PANTHER:PTHR31734:SF14 | SUPFAM:SSF54277 |
| EnsemblPlantsGene:TraesCS2D01G561800 | EnsemblPlants:TraesCS2D01G561800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:633877471..633878098
Molecular Weight (calculated)
18070.7 Da
IEP (calculated)
8.847
GRAVY (calculated)
-0.260
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPRSQAVFI PPTWRRRLPS IGYPQLRTTV GTAPTTLGLE LALARDPRRP STRSSPSMEG EAVDAELRLG PPGCGGGASS AGCTESKYVK VSVEGARYQR
101: KVDLRAYGGH AELRAALLGL AGHMLDLAVA YEDDAGDLLL AGDLPWDMFV PDCRSIRIMR RSTTVTSS
101: KVDLRAYGGH AELRAALLGL AGHMLDLAVA YEDDAGDLLL AGDLPWDMFV PDCRSIRIMR RSTTVTSS
001: MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
101: LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC KRLRIMKRSC NRG
Arabidopsis Description
IAA5Auxin-responsive protein IAA5 [Source:UniProtKB/Swiss-Prot;Acc:P33078]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.