Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14220 | Canola | nucleus | 84.87 | 81.45 |
| KRH31615 | Soybean | nucleus | 26.89 | 43.84 |
| HORVU5Hr1G081180.1 | Barley | cytosol, nucleus | 33.61 | 41.67 |
| Os09t0527700-01 | Rice | nucleus | 37.82 | 32.14 |
| TraesCS5A01G317200.1 | Wheat | cytosol | 35.29 | 31.58 |
| TraesCS5B01G317800.1 | Wheat | cytosol | 35.29 | 31.58 |
| TraesCS5D01G323500.1 | Wheat | cytosol | 35.29 | 31.58 |
| Zm00001d021279_P002 | Maize | plastid | 36.13 | 30.94 |
| EER97080 | Sorghum | plastid | 36.13 | 30.5 |
| KRH71336 | Soybean | nucleus | 12.61 | 28.3 |
| HORVU1Hr1G081910.1 | Barley | plastid | 28.57 | 25.56 |
| TraesCS2B01G591500.1 | Wheat | mitochondrion | 26.89 | 21.62 |
| Bra035185.1-P | Field mustard | cytosol | 33.61 | 21.28 |
| TraesCS2A01G592700.1 | Wheat | cytosol | 25.21 | 18.99 |
| TraesCS2D01G561800.1 | Wheat | mitochondrion | 26.05 | 18.45 |
| TraesCS2A01G592900.1 | Wheat | plastid | 24.37 | 16.29 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | InterPro:AUX/IAA_dom | InterPro:AUX_IAA | EnsemblPlantsGene:Bra010338 | EnsemblPlants:Bra010338.1 |
| EnsemblPlants:Bra010338.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009987 | InterPro:IPR000270 | UniProt:M4D1I8 | InterPro:PB1_dom | PFAM:PF02309 | PFscan:PS51745 |
| PANTHER:PTHR31734 | PANTHER:PTHR31734:SF39 | SUPFAM:SSF54277 | UniParc:UPI00025472B4 | : | : |
Description
AT4G29080 (E=6e-049) PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor
Coordinates
chrA08:+:13958315..13959137
Molecular Weight (calculated)
13459.9 Da
IEP (calculated)
4.514
GRAVY (calculated)
-0.529
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKTATEEDK SGPETCLYVK VSMEGAPYLR KIDLKTYKSY VELSSALEKM FSCFTLGQFG SHGGCGRDGL NESRLTDLLR GSEYVVAYED KDSDWMLVGV
101: VPWDSEGNGE MQKQELRLY
101: VPWDSEGNGE MQKQELRLY
001: MSVSVAAEHD YIGLSEFPTM EATTMSDKTK TRDNNNGLNF KATELRLGLP GSESPERVDS RFLALNKSSC PVSGAKRVFS DAINDSNKWV FSPGSTTATG
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
101: DVGSGSGPRT SVVKDGKSTT FTKPAVPVKE KKSSATAPAS KAQVVGWPPI RSFRKNSMAS SQSQKPGNNS ETEEAEAKSG PEQPCLYVKV SMEGAPYLRK
201: IDLKTYKSYL ELSSALEKMF SCFTIGQFGS HGGCGRDGLN ESRLTDLLRG SEYVVTYEDK DSDWMLVGDV PWEMFICSCK KLRIMKSSEA IGLAPRVMEK
301: CRSRN
Arabidopsis Description
IAA27Auxin-responsive protein IAA27 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.