Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87307 | Canola | cytosol | 65.12 | 44.68 |
| Bra035185.1-P | Field mustard | cytosol | 65.12 | 44.68 |
| CDY39982 | Canola | cytosol | 61.24 | 44.63 |
| TraesCS5D01G323500.1 | Wheat | cytosol | 22.48 | 21.8 |
| TraesCS5B01G317800.1 | Wheat | cytosol | 22.48 | 21.8 |
| TraesCS5A01G317200.1 | Wheat | cytosol | 22.48 | 21.8 |
| EER97080 | Sorghum | plastid | 23.26 | 21.28 |
| Zm00001d021279_P002 | Maize | plastid | 22.48 | 20.86 |
| Os09t0527700-01 | Rice | nucleus | 21.71 | 20.0 |
| KRH31615 | Soybean | nucleus | 10.85 | 19.18 |
| TraesCS2B01G591500.1 | Wheat | mitochondrion | 20.93 | 18.24 |
| HORVU1Hr1G081910.1 | Barley | plastid | 18.6 | 18.05 |
| HORVU5Hr1G081180.1 | Barley | cytosol, nucleus | 13.18 | 17.71 |
| TraesCS2D01G561800.1 | Wheat | mitochondrion | 20.93 | 16.07 |
| TraesCS2A01G592700.1 | Wheat | cytosol | 19.38 | 15.82 |
| TraesCS2A01G592900.1 | Wheat | plastid | 15.5 | 11.24 |
| KRH71336 | Soybean | nucleus | 1.55 | 3.77 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:844379 | UniProt:A0A2H1ZEF6 | ProteinID:AEE36397.2 | ArrayExpress:AT1G80390 |
| EnsemblPlantsGene:AT1G80390 | RefSeq:AT1G80390 | TAIR:AT1G80390 | RefSeq:AT1G80390-TAIR-G | EnsemblPlants:AT1G80390.1 | TAIR:AT1G80390.1 |
| InterPro:AUX/IAA_dom | InterPro:AUX_IAA | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0009734 | GO:GO:0009987 | Symbol:IAA15 | RefSeq:NP_001319427.1 | PFAM:PF02309 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF34 | UniParc:UPI000848E5A5 | : | : | : | : |
Description
IAA15indole-3-acetic acid inducible 15 [Source:TAIR;Acc:AT1G80390]
Coordinates
chr1:-:30221629..30222769
Molecular Weight (calculated)
14347.3 Da
IEP (calculated)
8.183
GRAVY (calculated)
-0.318
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPEEYVRVW PDSGDLGGTE LTLALPGTPT NASEGPKKFG NKRRFLETVD LKLGEAHENN YISSMVTNDQ LVGWPPVATA RKTVRRKYVK VALDGAAYLR
101: KVDLGMYDCY GQLFTALENM FQGIITICK
101: KVDLGMYDCY GQLFTALENM FQGIITICK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.