CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49760.1	CDX73678	AT3G51920.1	17360592
AT5G49760.1	CDX95314	AT3G51920.1	17360592
AT5G49760.1	CDY23174	AT3G51920.1	17360592
AT5G49760.1	CDY06478	AT4G14640.1	17360592
AT5G49760.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21453	Canola	plastid	45.65	99.09
CDX83185	Canola	extracellular	25.6	98.79
CDY21455	Canola	plasma membrane	97.38	97.38
CDY21452	Canola	plasma membrane	96.22	96.22
Bra000592.1-P	Field mustard	plasma membrane	82.69	95.4
CDY71822	Canola	cytosol	15.11	94.12
CDX83183	Canola	plasma membrane	79.33	93.1
CDY61244	Canola	plasma membrane	89.93	89.93
CDY70266	Canola	plasma membrane, plastid	58.97	87.68
CDY68959	Canola	endoplasmic reticulum, golgi	32.0	84.96
AT5G49760.1	Thale cress	plasma membrane	84.58	84.58
KRH26180	Soybean	cytosol	4.51	79.63
CDY12940	Canola	plasma membrane	75.24	77.01
CDY19539	Canola	plasma membrane	75.03	76.23
CDY12939	Canola	plasma membrane	74.5	75.69
KRH01898	Soybean	plasma membrane	32.53	55.66
KRH30865	Soybean	plasma membrane	52.36	53.6
KRH32710	Soybean	plasma membrane	52.15	53.33
Solyc01g102680.2.1	Tomato	plasma membrane	49.95	49.58
CDY49740	Canola	cytosol	51.31	35.03
CDY54882	Canola	plasma membrane	34.84	34.98
CDY11171	Canola	plasma membrane	34.31	34.64
CDY57828	Canola	plasma membrane	34.31	34.64
CDY10230	Canola	plasma membrane	34.63	34.63
CDY61604	Canola	plasma membrane	34.21	34.61
CDY07228	Canola	plastid	14.59	34.15
CDY61605	Canola	plasma membrane	33.58	33.65
CDY11169	Canola	plasma membrane	34.21	32.93
CDY68957	Canola	cytosol, plasma membrane	14.48	32.47
CDX81429	Canola	plasma membrane	16.16	30.62
CDY68222	Canola	plasma membrane	16.16	30.62
CDX93101	Canola	plasma membrane	15.53	30.02
CDY50413	Canola	plasma membrane	15.43	29.82
CDY22287	Canola	cytosol	51.73	28.68
CDY54184	Canola	plasma membrane, vacuole	12.91	27.7
CDX73538	Canola	cytosol, plasma membrane	31.69	26.24
CDX78191	Canola	cytosol, plasma membrane	31.9	25.81
CDX80322	Canola	mitochondrion	14.9	15.73
CDY30856	Canola	cytosol	0.63	2.79
CDX76198	Canola	cytosol	0.63	2.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078D4G4	EnsemblPlants:CDX83184
ProteinID:CDX83184	ProteinID:CDX83184.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00138718001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27003	PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE081B
SEG:seg	:	:	:	:	:

Description

BnaA03g23220D

Coordinates

chrLK031832:+:293231..297678

Molecular Weight (calculated)

104725.0 Da

IEP (calculated)

5.900

GRAVY (calculated)

-0.178

Length

953 amino acids

Sequence
(BLAST)

001: MSSRIGAFML LIFLFFQILS VSALTNGFDG SALQALKAEW TKPPSNWEGA DPCGTSWVGI TCSNNRVVSI SLGNLNVEGK LSGDIAALSE LQILDLSYNT
101: GLTGPLPPNI GELKKLKNLI LVGCSFTGQI PQSIGQLEQL IYLSLNLNQF SGTIPASIGR LSKLYWFDIA DNQIEGTLPV SNGTSSPGLD MLLETKHFHF
201: GKNKLSGSIP ENLFSSNMTL IHVLFDGNQF TGKIPDTLSL VQTLTVLRLD RNKLTGNIPT SLNNLTSLQE LYLANNEFTG TLPNLTSLTS LYTLDVSNNT
301: FEPSPIPSWI SSLDSLATLR MEGIKLNGSI PNSFFSPAQL QTVILKRNQI DSTLDFGTRF SNQLEFVDLQ YNNIDVYKQP SSNTVIQVIL ADNPVCQEEG
401: NKPNYCSEIP PNTSYSTIPP TCTPCDQGRE ASPSCRCAHP VIGTLYFRSP SFSGLLNSTN FEILQKSIED FFKKLSYPVD SVAIRNIREN ATDHQLLIDL
501: LVFPLGRESF NESGMSLVNF AFSNQTYKPP HIFGPYVFRA NPYNQFSDAG GSSSSNMGII IGAAVGAVVL LLLLTLAGVY ALRQRKRADR ATDQNNPFAK
601: WNTSKSSIDA PQLMGAKAFT FEELKKCTEN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRSEQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKIV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VMLELLTGKS PIERGKYVVR EVKTKMNKSR SLYDLQELMD TTIIASSSNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNVDSASSS RTYEEAIKGS GDPYGKDSFE YSGNFPASKL EPQ

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.