CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11169	Canola	plasma membrane	96.21	92.42
AT5G37450.2	Thale cress	plasma membrane	81.18	78.54
Solyc10g074900.1.1	Tomato	cytosol, plasma membrane, plastid	50.26	52.64
CDY61604	Canola	plasma membrane	49.63	50.11
CDY57828	Canola	plasma membrane	49.42	49.79
CDY11171	Canola	plasma membrane	49.42	49.79
CDY10230	Canola	plasma membrane	48.9	48.79
CDY54882	Canola	plasma membrane	48.69	48.79
PGSC0003DMT400080229	Potato	plastid	26.39	48.46
CDY21453	Canola	plastid	18.3	39.64
CDX73538	Canola	cytosol, plasma membrane	43.64	36.06
CDX78191	Canola	cytosol, plasma membrane	44.16	35.65
CDY70266	Canola	plasma membrane, plastid	23.45	34.79
CDY19539	Canola	plasma membrane	34.17	34.65
CDY12940	Canola	plasma membrane	33.86	34.59
CDY12939	Canola	plasma membrane	33.75	34.22
CDY61244	Canola	plasma membrane	33.96	33.89
CDY21455	Canola	plasma membrane	33.86	33.79
CDY21452	Canola	plasma membrane	33.86	33.79
CDX83184	Canola	plasma membrane	33.65	33.58
CDY71822	Canola	cytosol	5.36	33.33
CDX83183	Canola	plasma membrane	28.29	33.13
CDY07228	Canola	plastid	13.25	30.96
CDY68959	Canola	endoplasmic reticulum, golgi	11.46	30.36
CDX83185	Canola	extracellular	7.78	29.96
CDY68957	Canola	cytosol, plasma membrane	13.14	29.41
CDX81429	Canola	plasma membrane	14.93	28.23
CDX93101	Canola	plasma membrane	14.51	27.99
CDY68222	Canola	plasma membrane	14.72	27.83
CDY50413	Canola	plasma membrane	14.41	27.79
CDY54184	Canola	plasma membrane, vacuole	12.62	27.03
CDY49740	Canola	cytosol	32.7	22.28
CDY22287	Canola	cytosol	33.44	18.5
CDX80322	Canola	mitochondrion	13.78	14.51
CDY30856	Canola	cytosol	0.84	3.72
CDX76198	Canola	cytosol	0.84	3.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078JBT1	UniProt:A0A078JBT1
EnsemblPlants:CDY61605	ProteinID:CDY61605	ProteinID:CDY61605.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00034097001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEAD39
SEG:seg	:	:	:	:	:

Description

BnaC03g71340DBnaC03g71340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBT1]

Coordinates

chrLK034016:-:18728..23202

Molecular Weight (calculated)

104940.0 Da

IEP (calculated)

6.961

GRAVY (calculated)

-0.077

Length

951 amino acids

Sequence
(BLAST)

001: MMSTAGLILL VLSSCCLSLL DAQQITHPLD VSALHAVRRK LKDPMNHLQD WKKTDPCASN WTGVFCIADP SDGYLHVKEL RLLNLNLTGT LAPELSHLAN
101: LTILNFMWNN LTGQVPPEVG NLTHLIFLLL SGNKLTGPLP QELGSLSNLL ILQIDYNGIS GDLPTSLANL KKLKHFHMNN NSITGQIPPE YSSLPDVLHF
201: LMDNNKLTGY LPPELSQMAS LKIIQLDNNN FVGTEIPSSY GKIPNLVKLS LRNCNLEGPV PDMSRSPVLY YLDLSSNKLT GEIPNKRFSG NVTTINLYNN
301: MLNGSIPSNF SGLARLQRLS LKKNNLSGEI PVIWEKMSFT AEAKLILDLR YNLFTNVSNV LNPPSNVTVK LYGNPVCARV NETNVADLCG VSTTVDVVES
401: PGSSSDNSST TGECKRQSCP LSENYEYVIG SPVPCFCAAP IGIGLRLRSP SFSDFRPYTV AYMLDVASNL GINLYQLSIE SFSWQSGPRL AINMKVFPDL
501: NSKFNTTELP RIVDFFATFS LDTDDSLGPY EIIYINLLGP YKDVTLNLYP SKSGMSKGVK IGVIVGGTIA FFLGLSFLAL LLFFIKRKAK QQQEPIVPKS
601: PINMESVKGY NFMELDTATS SFSDLSQIGR GGYGKVYRGH LPCGLIVAVK RAEKGSLQGQ KEFYTEIELL SRLHHRNLVS LLGYCDQKGE QMLVYEFMPK
701: GSLQDALSAR FREPLSFGLR LRIALGSARG VLYLHTEADP PIIHRDIKPS NILLDNKMNP KVADFGISKL IALDGGGVQR DHVTTIVKGT PGYVDPEYYL
801: SHRLTEKSDV YSLGIVFLEI LTGMPPISHG RNIVREVKEA WEAGMMLSVI DESMGQDYSE EGVKRFMELA IRCCRDEPVE RPGMLEIVRE LENLFTKEEK
901: PYSSPSVQSS SASGMSGFFA PGLGSYNNNN TFSQFTANEL VSGVIPSIAP R

Best Arabidopsis Sequence Match ( AT5G37450.3 )
(BLAST)

001: MKEMMGVVGI ILVVSSCCLS LLDAQEITHP TDVSALQYVH RKLKDPLNHL QDWKKTDPCA SNWTGVICIP DPSDGFLHVK ELRLLNMNLT GQLAPELGLL
101: SNLTILNFMW NDLTGQIPPE LGNLTHLIFL LLSGNQLTGS LPQELGSLSN LLILQIDYNE ISGKLPTSLA NLKKLKHFHM NNNSITGQIP PEYSTLTNVL
201: HFLMDNNKLT GNLPPELAQM PSLRILQLDG SNFDGTEIPS SYGSIPNLVK LSLRNCNLEG PIPDLSKSLV LYYLDISSNK LTGEIPKNKF SANITTINLY
301: NNLLSGSIPS NFSGLPRLQR LQVQNNNLSG EIPVIWENRI LKAEEKLILD LRNNMFSNVS SVLLNPPSNV TVKLYGNPVC ANVNAGKLAD LCGISTLEVE
401: SPATSSETIS TGDCKRQSCP VSENYDYVIG SPVACFCAAP LGIDLRLRSP SFSDFRPYKV SYMLDVASPK NLGINPYQIS IDTFAWQSGP RLFMNMKIFP
501: EYSELNSKFN STEVQRIVDF FATFTLNTDD SLGPYEIISI NTGAYKDVTI IFPKKSGMSI GVSVGIIIGA IAFFLVLSSL ALVFFIKRSK RKRKTREVDM
601: EQEHPLPKPP MNMESVKGYN FTELDSATSS FSDLSQIGRG GYGKVYKGHL PGGLVVAVKR AEQGSLQGQK EFFTEIELLS RLHHRNLVSL LGYCDQKGEQ
701: MLVYEYMPNG SLQDALSARF RQPLSLALRL RIALGSARGI LYLHTEADPP IIHRDIKPSN ILLDSKMNPK VADFGISKLI ALDGGGVQRD HVTTIVKGTP
801: GYVDPEYYLS HRLTEKSDVY SLGIVFLEIL TGMRPISHGR NIVREVNEAC DAGMMMSVID RSMGQYSEEC VKRFMELAIR CCQDNPEARP WMLEIVRELE
901: NIYGLIPKEE KPYSSPSVQS SASGMSGFAV ASPRSSYTTF SEFTANQLVS GVIPSIAPR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G37450]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.