CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49740	Canola	cytosol	73.82	90.9
AT1G79620.5	Thale cress	plasma membrane	52.3	90.17
Solyc10g085670.1.1	Tomato	extracellular	41.24	73.55
KRH07655	Soybean	plasma membrane	41.24	73.32
PGSC0003DMT400021662	Potato	plasma membrane	40.95	73.03
KRH45351	Soybean	plasma membrane	40.95	72.65
VIT_08s0056g00100.t01	Wine grape	plasma membrane	39.5	70.66
GSMUA_Achr9P16880_001	Banana	plasma membrane	34.61	64.19
TraesCS4D01G175200.2	Wheat	plasma membrane	35.08	62.36
TraesCS4A01G131500.1	Wheat	plasma membrane	35.02	62.32
GSMUA_Achr3P09580_001	Banana	plasma membrane	34.67	62.08
HORVU4Hr1G051120.9	Barley	plasma membrane	34.85	61.94
KXG39452	Sorghum	plasma membrane	35.37	61.91
TraesCS4B01G173100.1	Wheat	plasma membrane	34.96	61.83
Os03t0329700-01	Rice	plasma membrane	34.96	61.64
CDY71822	Canola	cytosol	5.24	58.82
Zm00001d029012_P002	Maize	plastid	36.01	58.67
CDY21453	Canola	plastid	14.54	56.95
CDX83185	Canola	extracellular	7.74	53.85
CDY21455	Canola	plasma membrane	28.68	51.73
CDX83184	Canola	plasma membrane	28.68	51.73
GSMUA_Achr3P09570_001	Banana	plasma membrane	27.86	51.67
CDY21452	Canola	plasma membrane	28.56	51.52
CDX83183	Canola	plasma membrane	24.26	51.35
CDY61244	Canola	plasma membrane	28.45	51.31
Os05t0305900-01	Rice	plasma membrane	27.98	51.01
OQU77613	Sorghum	plasma membrane	27.92	50.96
GSMUA_Achr9P16900_001	Banana	plasma membrane	27.69	50.91
CDY68959	Canola	endoplasmic reticulum, golgi	10.59	50.7
CDY12940	Canola	plasma membrane	27.11	50.05
Zm00001d010448_P003	Maize	plasma membrane	27.69	49.74
CDY70266	Canola	plasma membrane, plastid	18.5	49.61
CDY12939	Canola	plasma membrane	26.82	49.15
CDY19539	Canola	plasma membrane	26.82	49.15
TraesCS2D01G428900.1	Wheat	plasma membrane	27.34	48.55
TraesCS2B01G452400.2	Wheat	plasma membrane	27.28	48.4
TraesCS2A01G431100.2	Wheat	plasma membrane	27.23	48.35
GSMUA_Achr10P...	Banana	plasma membrane	25.95	48.16
HORVU2Hr1G100620.3	Barley	cytosol	17.39	44.1
CDY10230	Canola	plasma membrane	20.07	36.2
CDY54882	Canola	plasma membrane	19.95	36.14
CDY61604	Canola	plasma membrane	19.49	35.56
CDY11171	Canola	plasma membrane	19.49	35.49
CDY57828	Canola	plasma membrane	19.49	35.49
CDY07228	Canola	plastid	8.09	34.15
CDY61605	Canola	plasma membrane	18.5	33.44
CDY11169	Canola	plasma membrane	18.79	32.63
CDY68957	Canola	cytosol, plasma membrane	7.91	32.0
CDY68222	Canola	plasma membrane	8.38	28.63
CDX81429	Canola	plasma membrane	8.38	28.63
CDY54184	Canola	plasma membrane, vacuole	7.39	28.6
CDY50413	Canola	plasma membrane	8.14	28.4
CDX93101	Canola	plasma membrane	8.14	28.4
CDX73538	Canola	cytosol, plasma membrane	17.86	26.67
CDX78191	Canola	cytosol, plasma membrane	18.09	26.4
CDX80322	Canola	mitochondrion	8.49	16.17
CDY30856	Canola	cytosol	0.35	2.79
CDX76198	Canola	cytosol	0.35	2.79

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:1.10.510.10	MapMan:18.4.1.8.1	MapMan:18.4.24.2.5	Gene3D:3.30.200.20
Gene3D:3.60.40.10	Gene3D:3.80.10.10	GO:A0A078GB30	UniProt:A0A078GB30	EnsemblPlants:CDY22287	ProteinID:CDY22287
ProteinID:CDY22287.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00018752001	InterPro:IPR000719	InterPro:IPR001932	InterPro:IPR032675
InterPro:IPR036457	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00481	PFAM:PF07714
PFAM:PF08263	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51746	PANTHER:PTHR27003	PANTHER:PTHR27003:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00332	SUPFAM:SSF52058	SUPFAM:SSF56112	SUPFAM:SSF81606	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EE70B4	SEG:seg	:	:	:

Description

BnaC02g25910DBnaC02g25910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB30]

Coordinates

chrLK032129:-:586242..595835

Molecular Weight (calculated)

188663.0 Da

IEP (calculated)

6.009

GRAVY (calculated)

-0.174

Length

1719 amino acids

Sequence
(BLAST)

0001: MQNFCSRDDT VFCGVFDGHG PFGHMVAKKV RDTLPSTLST QLKLASESEQ SGLLNPNGEQ LPEMYLPLKH ALLKSCQQID KELKMHPTID CFCSGTTSVT
0101: LIKQGEDLVV GNIGDSRAVL ATRDKDNALV AVQLTIDLKP DLPSESARIQ KCKGRVFALQ DEPEVARVWL PNSNSPGLAM ARAFGDFCLK DYGLISVPDI
0201: NYRRLTEEDQ FIILASDGVW DVLSNKEAVD IVASAPSRST AARALVDTAV RSWRIKYPTS KNDDCTVVCL FLQDSSNVVK DSLREDSVES VSISNKEEEI
0301: VPVKEESISK SCGIESKMMT MTLAECISVA QDDEEWSALE GLTRVNSLLS IPRFFSGTMV AATTTMTATS RLFLFCLTYS FTVFSMVSSV TDPRDAAALR
0401: SLMDQWDNTP PSWGGSDDPC GTPWEGVSCN SSRITALGLS TMGLKGRLSG DIGELSELRS LDLSFNPGLT GSLTSRLRDL QKLNILILAG CGFTGSIPNE
0501: IGYLKDLSFL ALNSNNFTGK IPASLGNLSK VYWLDLADNQ LTGPIPISSG SSPGLDLLLK AKHFHFNKNQ LSGTIPPKLF SSEMILIHVL FDGNQFTGSI
0601: PSTLGLVQTL EVLRLDRNTL TGKVPENLSN LTNIIELNLA HNKLVGSLPD LSDMKSLNYV DLSNNSFDPS ESPLWFSTLP SLTTLVMEYG ALHGPLPNKL
0701: FGYPQLQQVK LRKNAFNGTL SLGDTVGPEL QLVDLQDNDI SSVTLSSGYT NTLILVGNPV CTTALSNTNY CQIQQKQAKR IYSTSLANCG GKSCPLDQKV
0801: SPQSCECAYP YEGTLYFRGP MFRDLTNANT YHSLEMSLWV KLGLTPGSVS LQNPFFNNDD YLQIQLELFP STGKYFNRSE VQRIGFDLSN QTYKPPPLFG
0901: PYYFIASPYT FPALWFTGKI PASLGNLSKV YWLDLADNQL TGPIPISSGS SPGLDLLLKA KHFHFNKNQL SGTIPPKLFS SEMILIHVLF DGNQFTGSIP
1001: STLGLVQTLE VLRLDRNTLT GKVPENLSNL TNIIELNLAH NKLVGSLPDL SDMKSLNYVD LSNNSFDPSE SPLWFSTLPS LTTLVMEYGS LHGPLPNKLF
1101: GYPQLQQVKL RKNAFNGTLS LGDTVGPELQ LVDLQDNDIS SVTLSSGYTN TLILVGNPVC TTALSNTNYC QIQQKQAKHQ KVSPQSCECA YPYEGTLYFR
1201: GPMFRDLTNA NTYHSLEMSL WVKLGLTPGS VSLQNPFFNN DDYLQIQLEL FPSTGKYFNR SEVQRIGFDL SNQTYKPPPL FGPYYFIASP YTFPGNISRM
1301: VTGIITGCSA LVLCLVALGI YAFWQKRRAE QAIGLSRPFA KTNSGCLSVS WASSGKDSGG APQLKGARWF SYEELKKITN NFSMSSELGS GGYGKVYKGM
1401: LSDGQMVAIK RAQQGSTQGG HEFKTEIELL SRVHHKNLVG LVGFCFEQGE QILVYEFMSN GSLKDSLTGR SSIALDWKRR LRVALGSARG LAYLHELADP
1501: PIIHRDVKST NILLDENLTA KVADFGLSKL VSDCTKGHVS TQVKGTLGYL DPEYYTTQKL TEKSDVYSFG VVLLELITAK QPIEKGKYIV REIKLVMNKN
1601: DEEYYGLRDK MDRPLRDAGA LPELGRYMEL ALKCVDETAS ERPTMSEVVK EIEIIIQNSG ASTSSSSASA SSSATDFGGV KGGDKVLYGE IVRKKEARDG
1701: DGAFDYSGGY SVMTKVEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.